BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0682500 Os02g0682500|AK112090
(355 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G24520.1 | chr5:8371708-8372733 REVERSE LENGTH=342 399 e-112
AT1G12910.1 | chr1:4395114-4396154 REVERSE LENGTH=347 345 3e-95
AT3G26640.1 | chr3:9793276-9794316 FORWARD LENGTH=347 341 4e-94
AT1G29260.1 | chr1:10224923-10225876 FORWARD LENGTH=318 66 3e-11
AT2G16780.1 | chr2:7281615-7283583 REVERSE LENGTH=416 56 3e-08
AT4G35050.1 | chr4:16682752-16684751 REVERSE LENGTH=425 56 3e-08
AT4G35370.1 | chr4:16815138-16817504 FORWARD LENGTH=434 55 4e-08
AT2G19540.1 | chr2:8461804-8464347 FORWARD LENGTH=470 54 2e-07
AT4G18900.1 | chr4:10356465-10359078 FORWARD LENGTH=462 48 7e-06
>AT5G24520.1 | chr5:8371708-8372733 REVERSE LENGTH=342
Length = 341
Score = 399 bits (1026), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/337 (59%), Positives = 240/337 (71%), Gaps = 16/337 (4%)
Query: 23 TCELPHSIYALAFSP----SAPVLAAGSFLEDLHNRVSLLSFDPVHPTAASFRALPALSF 78
T + P+ +YA+AFS S +A GSFLED +NR+ +LSFD + + + LP LSF
Sbjct: 17 TYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDS---DSMTVKPLPNLSF 73
Query: 79 DHPYPPTKLQFHPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLDNRKTS 138
+HPYPPTKL F P SVL+N KTS
Sbjct: 74 EHPYPPTKLMFSP----PSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNSKTS 129
Query: 139 ASEFCAPLTSFDWNEAEPRRIGTASIDTTCTIWDIERGVVETQLIAHDKAVHDIAWGENG 198
EFCAPLTSFDWN+ EP+R+GT SIDTTCTIWDIE+ VVETQLIAHDK VHDIAWGE
Sbjct: 130 --EFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEAR 187
Query: 199 IFASVSADGSVRVFDLRDKEHSTIFYESPRPDTPLLRLAWNRYDFHYMATLLMDSSAVVV 258
+FASVSADGSVR+FDLRDKEHSTI YESP+PDTPLLRLAWN+ D YMAT+LMDS+ VV+
Sbjct: 188 VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVI 247
Query: 259 LDMRAPGVPVAELHRHRACANAVAWAPQATRHLCSAGDDGQALIWELPATPGAVPAEGID 318
LD+R+P +PVAEL RH+A NA+AWAPQ+ +H+CS GDD QALIWELP G GID
Sbjct: 248 LDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAG---PNGID 304
Query: 319 PVMVYDAGAEINQLQWAAAYPEWISIAFENKVQLLRV 355
P+ VY AG+EINQLQW+++ P+WI IAF NK+QLLRV
Sbjct: 305 PMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341
>AT1G12910.1 | chr1:4395114-4396154 REVERSE LENGTH=347
Length = 346
Score = 345 bits (884), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 180/337 (53%), Positives = 220/337 (65%), Gaps = 15/337 (4%)
Query: 22 FTCELPHSIYALAFS---PSAPVLAAGSFLEDLHNRVSLLSFDPVHPTAASFRALPALSF 78
+T E P IYA+ +S LA S LE NRV ++ D + R+ P LSF
Sbjct: 22 YTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQLDE---SNGEIRSDPNLSF 78
Query: 79 DHPYPPTKLQFHPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLDNRKTS 138
+HPYPPTK F P S L++ K S
Sbjct: 79 EHPYPPTKTIFIP------DKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNS 132
Query: 139 ASEFCAPLTSFDWNEAEPRRIGTASIDTTCTIWDIERGVVETQLIAHDKAVHDIAWGENG 198
EFC PLTSFDWNEAEPRRIGT+S DTTCTIWDIER V+TQLIAHDK V DIAWG G
Sbjct: 133 --EFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVG 190
Query: 199 IFASVSADGSVRVFDLRDKEHSTIFYESPRPDTPLLRLAWNRYDFHYMATLLMDSSAVVV 258
+FASVSADGSVRVFDLRDKEHSTI YES PDTPL+RL WN+ D YMAT++MDS+ VVV
Sbjct: 191 VFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVV 250
Query: 259 LDMRAPGVPVAELHRHRACANAVAWAPQATRHLCSAGDDGQALIWELPATPGAVPAEGID 318
LD+R P +PV EL RH+A NA+AWAP ++ H+C+AGDD QALIW++ + V G+D
Sbjct: 251 LDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEG-GLD 309
Query: 319 PVMVYDAGAEINQLQWAAAYPEWISIAFENKVQLLRV 355
P++ Y AGAEI QLQW+++ P+W++IAF K+Q+LRV
Sbjct: 310 PILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346
>AT3G26640.1 | chr3:9793276-9794316 FORWARD LENGTH=347
Length = 346
Score = 341 bits (874), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 175/337 (51%), Positives = 219/337 (64%), Gaps = 15/337 (4%)
Query: 22 FTCELPHSIYALAFS---PSAPVLAAGSFLEDLHNRVSLLSFDPVHPTAASFRALPALSF 78
+T E P IYA+ +S LA S +E NRV ++ D + R+ P L F
Sbjct: 22 YTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQLDE---SNGEIRSDPNLCF 78
Query: 79 DHPYPPTKLQFHPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLDNRKTS 138
+HPYPPTK F P S L + K S
Sbjct: 79 EHPYPPTKTSFIP------DKECQRPDLLATSSDFLRLWRISDDESRVELKSCLSSDKNS 132
Query: 139 ASEFCAPLTSFDWNEAEPRRIGTASIDTTCTIWDIERGVVETQLIAHDKAVHDIAWGENG 198
EF P+TSFDWNEAEPRRIGT+SIDTTCTIWDIER VV+TQLIAHDK V+DIAWG G
Sbjct: 133 --EFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGVG 190
Query: 199 IFASVSADGSVRVFDLRDKEHSTIFYESPRPDTPLLRLAWNRYDFHYMATLLMDSSAVVV 258
+FASVS DGSVRVFDLRDKEHSTI YES P TPL+RL+WN+ D YMAT++M S+ +VV
Sbjct: 191 VFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIVV 250
Query: 259 LDMRAPGVPVAELHRHRACANAVAWAPQATRHLCSAGDDGQALIWELPATPGAVPAEGID 318
LD+R P +PV EL RH+A NA+AWAP ++ H+CSAGDD QALIW++ + V G+D
Sbjct: 251 LDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEG-GLD 309
Query: 319 PVMVYDAGAEINQLQWAAAYPEWISIAFENKVQLLRV 355
P++ Y AGAE+ QLQW+++ P+W++IAF NK+Q+LRV
Sbjct: 310 PILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346
>AT1G29260.1 | chr1:10224923-10225876 FORWARD LENGTH=318
Length = 317
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 138 SASEFCAPLTSFDWNEAEPRRIGTASIDTTCTIWDIERGVVETQLIAHDKAVHDIAWG-- 195
S E + S D+N T+S D T +W ++R H V+ W
Sbjct: 101 SFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPK 160
Query: 196 ENGIFASVSADGSVRVFDLRDKEHSTIFYESPRPDTPLLRLAWNRYDFHYMATLLMDSSA 255
+FAS S D ++R++D+R+ + I P D +L WN+YD +AT +D +
Sbjct: 161 HGDVFASASGDCTLRIWDVREPGSTMII---PAHDFEILSCDWNKYDDCILATSSVDKT- 216
Query: 256 VVVLDMRAPGVPVAELHRHRACANAVAWAPQATRHLCSAGDDGQALIWE 304
V V D+R+ VP+A L+ H V ++P + S D +W+
Sbjct: 217 VKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
>AT2G16780.1 | chr2:7281615-7283583 REVERSE LENGTH=416
Length = 415
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 161 TASIDTTCTIWDI----ERGVVETQLI--AHDKAVHDIAW--GENGIFASVSADGSVRVF 212
+ S D +WD+ + V+ + H+ A+ D++W +F S DG + ++
Sbjct: 186 SGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIW 245
Query: 213 DLRDKE--HSTIFYESPRPDTPLLRLAWNRYDFHYMATLLMDSSAVVVLDMRAPGVPVAE 270
D R + H +E + L++N ++ +AT DS+ V + D+R P+
Sbjct: 246 DTRTNQMQHQVKVHERE-----VNYLSFNPFNEWVLATASSDST-VALFDLRKLNAPLHV 299
Query: 271 LHRHRACANAVAWAPQATRHLCSAGDDGQALIWELPATPG-----AVPAEGIDPVMVYDA 325
+ H V W P L S+G+D + ++W+L + AE P +++
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSH 359
Query: 326 G---AEINQLQWAAAYPEWI--SIAFENKVQLLRV 355
G A+I+ W P W+ S+A +N +Q+ ++
Sbjct: 360 GGHKAKISDFAWNKNEP-WVIASVAEDNSLQVWQM 393
>AT4G35050.1 | chr4:16682752-16684751 REVERSE LENGTH=425
Length = 424
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 27/225 (12%)
Query: 151 WNEAEPRRIGTASIDTTCTIWDIERGVVETQLI------AHDKAVHDIAW--GENGIFAS 202
W+ + + + S D +WD+ + L H + D+AW IF S
Sbjct: 177 WSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGS 236
Query: 203 VSADGSVRVFDLRDKE--HSTIFYESPRPDTPLLRLAWNRYDFHYMATLLMDSSAVVVLD 260
D + ++DLR + H +E + L++N ++ +AT DS+ V + D
Sbjct: 237 AGDDCQLVIWDLRTNQMQHQVKVHERE-----INYLSFNPFNEWVLATASSDST-VALFD 290
Query: 261 MRAPGVPVAELHRHRACANAVAWAPQATRHLCSAGDDGQALIWELPATPG-----AVPAE 315
+R P+ L +H V W P L S+G+D + ++W++ + AE
Sbjct: 291 LRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAE 350
Query: 316 GIDPVMVYDAG---AEINQLQWAAAYPEWI--SIAFENKVQLLRV 355
P +++ G A+I+ W P W+ S+A +N +Q+ ++
Sbjct: 351 DGPPELLFSHGGHKAKISDFAWNKDEP-WVISSVAEDNSLQVWQM 394
>AT4G35370.1 | chr4:16815138-16817504 FORWARD LENGTH=434
Length = 433
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 7/165 (4%)
Query: 144 APLTSFDWNEAEPRRIGTASIDTTCTIWDIERGVVETQLIAHDKAVHDIAWGENG--IFA 201
P+ WN+ + + S D +WD+ G + + H+K VH +AW +
Sbjct: 217 GPVIDLAWNKEFRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLL 276
Query: 202 SVSADGSVRVFDLRDKEHSTIFYESPRPDTPLLRLAWNRYDFHYMATLLMDSSAVVVLDM 261
S S D +V + D RD +S + + + + + +LAW+ + H L D + V D
Sbjct: 277 SGSRDRTVVLKDGRDPSNSGLKWST---EAKVEKLAWDPHSEHSFVVSLKDGT-VKGFDT 332
Query: 262 RAPGV-PVAELHRHRACANAVAWAPQATRHLCSAGDDGQALIWEL 305
RA + P +H H + +++++ A L + D +W+L
Sbjct: 333 RASDLSPSFIIHAHDSEVSSISYNIHAPNLLATGSADESVKLWDL 377
>AT2G19540.1 | chr2:8461804-8464347 FORWARD LENGTH=470
Length = 469
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 21/180 (11%)
Query: 144 APLTSF----------DWNEAEPRRIGTASIDTTCTIWDIERG---VVETQLIAHDKAVH 190
APL +F DW+ A R+ + + +W+ G V H +V
Sbjct: 214 APLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVE 273
Query: 191 DIAW--GENGIFASVSADGSVRVFDLRDKEHSTIFYESPRPDTPLLRLAWNRYDFHYMAT 248
D+ W E +FAS S DGSV V+D+R + + +++ D + ++WNR +A+
Sbjct: 274 DLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNV--ISWNRLASCMLAS 331
Query: 249 LLMDSSAVVVLDMR---APGVPVAELHRHRACANAVAWAPQATRHLCSAGDDGQALIWEL 305
D + D+R VA H+ ++ W+ L D Q IW+L
Sbjct: 332 -GSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDL 390
>AT4G18900.1 | chr4:10356465-10359078 FORWARD LENGTH=462
Length = 461
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 12/163 (7%)
Query: 151 WNEAEPRRIGTASIDTTCTIWDIERGVVETQLIAHDKAVHDIAWGENG--IFASVSADGS 208
WN+ + +AS D +WD+ G + + H K V +AW + S S D +
Sbjct: 241 WNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQT 300
Query: 209 VRVFDLRDKEHSTIFYESPRPDTPLLRLAWNRYDFHYMATLLMDSSAVVVLDMRAPGVPV 268
V + D R HS F S D LAW+ + H L D + V D+R +
Sbjct: 301 VVLKDGRQPSHSG-FKWSVMSDVE--SLAWDPHSEHSFVVSLEDGT-VKGFDVRQASISA 356
Query: 269 AE------LHRHRACANAVAWAPQATRHLCSAGDDGQALIWEL 305
+E ++ H A +V++ A L + D +W+L
Sbjct: 357 SESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDL 399
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.134 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,828,582
Number of extensions: 257695
Number of successful extensions: 903
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 910
Number of HSP's successfully gapped: 10
Length of query: 355
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 255
Effective length of database: 8,364,969
Effective search space: 2133067095
Effective search space used: 2133067095
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)