BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0681000 Os02g0681000|AK103328
         (510 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G00290.1  | chr4:123097-125300 REVERSE LENGTH=498              347   9e-96
AT4G00234.1  | chr4:100919-101788 FORWARD LENGTH=264              155   4e-38
AT1G58200.1  | chr1:21548370-21552488 REVERSE LENGTH=679           50   2e-06

>AT4G00290.1 | chr4:123097-125300 REVERSE LENGTH=498
          Length = 497

 Score =  347 bits (890), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 176/421 (41%), Positives = 262/421 (62%), Gaps = 19/421 (4%)

Query: 107 AKPEDY--KNAMAKVSSTETSEVGATDHSGNT-----------WIDILDSARHSTIDXXX 153
           AKP +Y   ++ A+  S+++ + G+   SG T           W++       +++D   
Sbjct: 64  AKPFNYLGHSSYARAFSSKSDDFGSIVASGVTGSGDGNGNGNDWVEKAKDVLQTSVDAVT 123

Query: 154 XXXXXXXXMTDPIVPCIQELYATYPDLQRMVIPLGGTLMGTAVAWFVMPIVLRKLHKYTS 213
                   ++D ++P +Q+   + P L+ +++P+  T+ GT  AW VMP +LR+ H Y  
Sbjct: 124 ETAKKTKDVSDEMIPHVQQFLDSNPYLKDVIVPVSLTMTGTLFAWVVMPRILRRFHTYAM 183

Query: 214 ENPLITLEGESTKKYMSYQTSLWSALEDPAKCIITFMAFSQMAAIVVPSI--SVYLPQAW 271
           ++    L    + + + Y+ S W ALEDPA+ ++TF+AF+Q+AA+V P+   + Y     
Sbjct: 184 QSSAKLLPVGFSNEDVPYEKSFWGALEDPARYLVTFIAFAQIAAMVAPTTIAAQYFSPTV 243

Query: 272 RGTFVVSLLWFLQKWKTNFIANIMTNQSAIGMDRDRLLTFDKVSSXXXXXXXXXXXXXXC 331
           +G  ++SL+WFL +WKTN I  +++ +S  G+DR+++LT DKVSS              C
Sbjct: 244 KGAVILSLVWFLYRWKTNVITRMLSAKSFGGLDREKVLTLDKVSSVGLFAIGLMASAEAC 303

Query: 332 GVPVQSILXXXXXXXXXXXXXXRDVLGNILSGLSLQFSKPFLVGDNIKAGSIEGKVIEIG 391
           GV VQSIL              RD+LGN+LSGLS+QFS+PF +GD IKAGS+EG+VIE+G
Sbjct: 304 GVAVQSILTVGGVGGVATAFAARDILGNVLSGLSMQFSRPFSMGDTIKAGSVEGQVIEMG 363

Query: 392 LTSTLLINPENLPVVVPNSLFSSQIIVNKSRAVWRARVVKIPVIIEDLEKIPTISEEIKV 451
           LT+T L+N E  PV+VPNSLFSSQ+IVNKSRA WRA   KIP+ I+DL+ IP IS EIK 
Sbjct: 364 LTTTSLLNAEKFPVLVPNSLFSSQVIVNKSRAQWRAIASKIPLQIDDLDMIPQISNEIKE 423

Query: 452 KLRSNPNI----DAPYCYLSRLESSHGELTIGCNIKSMRRDEWTTVEQDILLKAASIVKQ 507
            LRSN  +    +AP+CYLSR+E S  ELTIGCN+  M ++E    +Q++LL+A  I+K+
Sbjct: 424 MLRSNTKVFLGKEAPHCYLSRVEKSFAELTIGCNLIRMGKEELYNTQQEVLLEAVKIIKK 483

Query: 508 Y 508
           +
Sbjct: 484 H 484



>AT4G00234.1 | chr4:100919-101788 FORWARD LENGTH=264
          Length = 263

 Score =  155 bits (393), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 138/246 (56%), Gaps = 13/246 (5%)

Query: 107 AKPEDY--KNAMAKVSSTETSEVGA---------TDHSGNTWIDILDSARHSTIDXXXXX 155
           AKP +Y   ++ A+  S+++ + G+          D +GN W++       ++++     
Sbjct: 14  AKPFNYLSHSSYARAFSSKSDDFGSIVASGVTGSGDGNGNDWVEKAKDVVQTSVNAVAET 73

Query: 156 XXXXXXMTDPIVPCIQELYATYPDLQRMVIPLGGTLMGTAVAWFVMPIVLRKLHKYTSEN 215
                 ++D ++P +Q+   + P L+ +++P+  T+ GT  AW VMP +LR+ H Y  ++
Sbjct: 74  AKKTKDVSDEMIPHVQQFLDSNPYLKDVIVPVSLTVTGTLFAWIVMPRILRRFHTYAMQS 133

Query: 216 PLITLEGESTKKYMSYQTSLWSALEDPAKCIITFMAFSQMAAIVVPSI--SVYLPQAWRG 273
               L    + + + Y+ S W ALEDPA+ ++TF+AF+Q+AA+V P+   + Y     +G
Sbjct: 134 SAKLLPVGFSNEDIPYEKSFWGALEDPARYLVTFIAFAQIAAMVAPTTIAAQYFSPTVKG 193

Query: 274 TFVVSLLWFLQKWKTNFIANIMTNQSAIGMDRDRLLTFDKVSSXXXXXXXXXXXXXXCGV 333
             ++S++WFL +WKTN I  +++ +S  G+DRD++LT DKVSS              CGV
Sbjct: 194 AVILSVVWFLYRWKTNVITRMLSAKSFGGLDRDKVLTLDKVSSVGLFAIGLMASAEACGV 253

Query: 334 PVQSIL 339
            VQSIL
Sbjct: 254 AVQSIL 259



>AT1G58200.1 | chr1:21548370-21552488 REVERSE LENGTH=679
          Length = 678

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 83/167 (49%), Gaps = 13/167 (7%)

Query: 354 RDVLGNILSGLSLQFSKPFLVGD----NIKAGSIEGKVIEIGLTSTLLINPENLPVV-VP 408
           R++L N LS + +  ++PF++ +     I    + G V ++G  S  +I  ++   V +P
Sbjct: 282 REILTNFLSSIMIHATRPFVLNEWIQTKIGGYEVSGTVEQVGWWSPTIIRGDDREAVHIP 341

Query: 409 NSLFSSQIIVNKSRAV-WRARVVKIPVIIEDLEKIPTISEEIKVKLRSNPNIDAP----Y 463
           N  FS  I+ N ++   WR +   + +   D+ KI  I  +++  L  NP I+       
Sbjct: 342 NHQFSVNIVRNLTQKTHWRIKT-HLAISHLDVSKINNIVADMRKVLSKNPQIEQQKIHRR 400

Query: 464 CYLSRLESSHGELTI--GCNIKSMRRDEWTTVEQDILLKAASIVKQY 508
            +L  ++  +  L I   C +K+ R +E+  V++ +LL   ++++ +
Sbjct: 401 VFLEDIDPENQALRILISCFVKTSRFEEYLCVKEAVLLDLLTVIRHH 447



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.132    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,380,624
Number of extensions: 339304
Number of successful extensions: 805
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 805
Number of HSP's successfully gapped: 4
Length of query: 510
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 407
Effective length of database: 8,282,721
Effective search space: 3371067447
Effective search space used: 3371067447
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)