BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0678400 Os02g0678400|AK071766
         (311 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G63000.1  | chr1:23342510-23343859 FORWARD LENGTH=302          520   e-148
AT1G78570.1  | chr1:29550110-29552207 FORWARD LENGTH=670          495   e-140
AT3G14790.1  | chr3:4964791-4966875 FORWARD LENGTH=665            455   e-128
AT1G53500.1  | chr1:19967157-19969239 REVERSE LENGTH=668          447   e-126

>AT1G63000.1 | chr1:23342510-23343859 FORWARD LENGTH=302
          Length = 301

 Score =  520 bits (1339), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 238/285 (83%), Positives = 267/285 (93%)

Query: 24  YKFLIYGRTGWIGGLLGQLCAARGIPFAYGAGRLENRAQLETDIDEVAPTHVFNAAGVTG 83
           + FLIYG+TGWIGGLLG+LC A+GI + YG+GRL++R  +  DI+ V P+HVFNAAGVTG
Sbjct: 13  FNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHVFNAAGVTG 72

Query: 84  RPNVDWCETHRTETIRANVCGTLTLADVCRARGLVLINYATGCIFEYDAGHQLGTGIGFK 143
           RPNVDWCE+H+ ETIR NV GTLTLAD+CR +GLVLINYATGCIFEYD+GH LG+GIGFK
Sbjct: 73  RPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHPLGSGIGFK 132

Query: 144 EEDTPNFVGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLSNPRNFITKIARYDKVVD 203
           EEDTPNF GSFYSKTKAMVEELLKNYENVCTLRVRMPISSDL+NPRNFITKIARY+KVVD
Sbjct: 133 EEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFITKIARYEKVVD 192

Query: 204 IPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRDYIDPNFSWKNFTLE 263
           IPNSMTILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMYRDYIDP+F+WKNFTLE
Sbjct: 193 IPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLE 252

Query: 264 EQAKVIVAPRSNNELDCTKLKAEFPELLSIKDSLVRYVFKPNQKT 308
           EQAKVIVAPRSNNELD TKLK EFPEL+SIK+SL+++VF+PN+KT
Sbjct: 253 EQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKT 297



>AT1G78570.1 | chr1:29550110-29552207 FORWARD LENGTH=670
          Length = 669

 Score =  495 bits (1274), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 227/286 (79%), Positives = 257/286 (89%)

Query: 23  AYKFLIYGRTGWIGGLLGQLCAARGIPFAYGAGRLENRAQLETDIDEVAPTHVFNAAGVT 82
           + KFLIYG+TGWIGGLLG++C  +GI + YG GRLE+R+ L  DI  V PTHVFN+AGVT
Sbjct: 384 SLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGVT 443

Query: 83  GRPNVDWCETHRTETIRANVCGTLTLADVCRARGLVLINYATGCIFEYDAGHQLGTGIGF 142
           GRPNVDWCE+H+TETIRANV GTLTLADVCR  GL+++N+ATGCIFEYD  H  G+GIGF
Sbjct: 444 GRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGF 503

Query: 143 KEEDTPNFVGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLSNPRNFITKIARYDKVV 202
           KEEDTPNF GSFYSKTKAMVEELLK Y+NVCTLRVRMPISSDL+NPRNFITKI+RY+KVV
Sbjct: 504 KEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV 563

Query: 203 DIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRDYIDPNFSWKNFTL 262
           +IPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMYRDYI+P F W NFTL
Sbjct: 564 NIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFTL 623

Query: 263 EEQAKVIVAPRSNNELDCTKLKAEFPELLSIKDSLVRYVFKPNQKT 308
           EEQAKVIVAPRSNNE+D +KLK EFPELLSIK+SL++Y + PN+KT
Sbjct: 624 EEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAYGPNKKT 669



>AT3G14790.1 | chr3:4964791-4966875 FORWARD LENGTH=665
          Length = 664

 Score =  455 bits (1171), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/286 (77%), Positives = 255/286 (89%)

Query: 23  AYKFLIYGRTGWIGGLLGQLCAARGIPFAYGAGRLENRAQLETDIDEVAPTHVFNAAGVT 82
           + KFLIYG+TGW+GGLLG+LC  +GIP+ YG GRLE+RA L  DI  + P+HVFNAAG+T
Sbjct: 379 SLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFNAAGLT 438

Query: 83  GRPNVDWCETHRTETIRANVCGTLTLADVCRARGLVLINYATGCIFEYDAGHQLGTGIGF 142
           GRPNVDWCE+H+TETIR NV GTLTLADVCR   L+++N+ATGCIFEYDA H  G+GIGF
Sbjct: 439 GRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEGSGIGF 498

Query: 143 KEEDTPNFVGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLSNPRNFITKIARYDKVV 202
           KEED PNF GSFYSKTKAMVEELL+ ++NVCTLRVRMPISSDL+NPRNFITKI+RY+KVV
Sbjct: 499 KEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV 558

Query: 203 DIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRDYIDPNFSWKNFTL 262
           +IPNSMTILDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMY+ YI+P+F W NF L
Sbjct: 559 NIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKWSNFNL 618

Query: 263 EEQAKVIVAPRSNNELDCTKLKAEFPELLSIKDSLVRYVFKPNQKT 308
           EEQAKVIVAPRSNNE+D  KL  EFPE+LSIKDSL++YVF+PN++T
Sbjct: 619 EEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKRT 664



>AT1G53500.1 | chr1:19967157-19969239 REVERSE LENGTH=668
          Length = 667

 Score =  447 bits (1151), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 218/286 (76%), Positives = 254/286 (88%)

Query: 23  AYKFLIYGRTGWIGGLLGQLCAARGIPFAYGAGRLENRAQLETDIDEVAPTHVFNAAGVT 82
           + KFLIYG+TGW+GGLLG+LC  +GI + YG GRLE+RA L  DI  + PTHVFNAAG+T
Sbjct: 382 SLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTHVFNAAGLT 441

Query: 83  GRPNVDWCETHRTETIRANVCGTLTLADVCRARGLVLINYATGCIFEYDAGHQLGTGIGF 142
           GRPNVDWCE+H+ ETIR NV GTLTLADVCR   L+++N+ATGCIFEYDA H  G+GIGF
Sbjct: 442 GRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPEGSGIGF 501

Query: 143 KEEDTPNFVGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLSNPRNFITKIARYDKVV 202
           KEED PNF GSFYSKTKAMVEELL+ ++NVCTLRVRMPISSDL+NPRNFITKI+RY+KVV
Sbjct: 502 KEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV 561

Query: 203 DIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRDYIDPNFSWKNFTL 262
           DIPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMY++YI+P F W NFT+
Sbjct: 562 DIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFKWSNFTV 621

Query: 263 EEQAKVIVAPRSNNELDCTKLKAEFPELLSIKDSLVRYVFKPNQKT 308
           EEQAKVIVA RSNNE+D +KL  EFPE+LSIK+SL++YVF+PN++T
Sbjct: 622 EEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVFEPNKRT 667



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.137    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,530,627
Number of extensions: 270725
Number of successful extensions: 642
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 643
Number of HSP's successfully gapped: 4
Length of query: 311
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 213
Effective length of database: 8,419,801
Effective search space: 1793417613
Effective search space used: 1793417613
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)