BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0672600 Os02g0672600|AK070286
         (706 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10760.1  | chr4:6619947-6623312 REVERSE LENGTH=686            676   0.0  
AT4G09980.1  | chr4:6247978-6252030 REVERSE LENGTH=964            122   8e-28

>AT4G10760.1 | chr4:6619947-6623312 REVERSE LENGTH=686
          Length = 685

 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/682 (55%), Positives = 432/682 (63%), Gaps = 49/682 (7%)

Query: 22  LEEAIGFRRETQMGLVASLQRLVPDLVPSLDRSLRIIAAFNDRPFVPTPN-PDGGHGKSP 80
           LE  I  + +  + L++SLQ +VPD+VPSLD SL++I++F +RPFV TP  P+      P
Sbjct: 20  LENRIRTQHDAHLDLLSSLQSIVPDIVPSLDLSLKLISSFTNRPFVATPPLPE------P 73

Query: 81  AALKPHHRRALPDPARSTRRKTXXXXXXXXXXXXXXXLDA------------VRTMVAVC 128
              K HH    P     T+ +                 DA            VR MVA C
Sbjct: 74  KVEKKHH----PIVKLGTQLQQLHGHDSKSMLVDSNQRDAEADGSSGSPMALVRAMVAEC 129

Query: 129 LLELVPFAEIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLALRRIAEDT 188
           LL+ VPF+  D                                     V  AL+ +AE+ 
Sbjct: 130 LLQRVPFSPTDSSTVLRKLENDQNARPAEKAALRDLGGECGPILA---VETALKSMAEEN 186

Query: 189 GGVQIEEAMIGGKSMTMVWAIDRNKLLKELPESATXXXXXXXXXXXXXXSETDAGSAMIP 248
           G V++EE  + GK   MV AIDR +LLKELPES                 E    S    
Sbjct: 187 GSVELEEFEVSGKPRIMVLAIDRTRLLKELPESFQGNNESNRVVETPNSIENATVSGGGF 246

Query: 249 RTXXXXXXXX-DMW----PHSMPPIFPRPRGMTMQGMQRVPGVPPGLMPLQRPFMGPAGV 303
                      +MW         P+   PRGM M GM    G+           MG    
Sbjct: 247 GVSGSGNFPRPEMWGGDPNMGFRPMMNAPRGMQMMGMHHPMGI-----------MGRPPP 295

Query: 304 ITMGGGVGPSPNXXXXXXXXXXXXXXXXXXXXXTYREKQNTKTGEELLDLIHRPTAKETA 363
             +   +    N                     +++EKQ ++TGEELLDLIHRPTAKE A
Sbjct: 296 FPLPLPLPVPSNQKLRSEEEDLKDVEALLSKK-SFKEKQQSRTGEELLDLIHRPTAKEAA 354

Query: 364 VAAKFKTKGGSQLKEYCTNLTKEDCRRQSGSFVACDKVHFRRIIAPHTDTNLGDCSFLDT 423
            AAKFK+KGGSQ+K YC  LTKEDCR QSGS +AC+K HFRR+IA HTD +LGDCSFLDT
Sbjct: 355 TAAKFKSKGGSQVKYYCRYLTKEDCRLQSGSHIACNKRHFRRLIASHTDVSLGDCSFLDT 414

Query: 424 CRHTKTCKYVHYELDQTPDIPPMMAGALAPPRQIRLQRAEYCSEVELGEAQWINCDIRNF 483
           CRH KTCKYVHYELD       MMAG   P + ++  RA+YCSE ELGEAQWINCDIR+F
Sbjct: 415 CRHMKTCKYVHYELDMAD---AMMAG---PDKALKPLRADYCSEAELGEAQWINCDIRSF 468

Query: 484 RMDILGQFGVIMADPPWDIHMELPYGTMADDEMRTLNVPALQTDGLIFLWVTGRAMELGR 543
           RMDILG FGV+MADPPWDIHMELPYGTMADDEMRTLNVP+LQTDGLIFLWVTGRAMELGR
Sbjct: 469 RMDILGTFGVVMADPPWDIHMELPYGTMADDEMRTLNVPSLQTDGLIFLWVTGRAMELGR 528

Query: 544 ECLELWGYKRVEEIIWVKTNQLQRIIRTGRTGHWLNHSKEHCLVGIKGNPLVNRNIDTDV 603
           ECLELWGYKRVEEIIWVKTNQLQRIIRTGRTGHWLNHSKEHCLVGIKGNP VNRNIDTDV
Sbjct: 529 ECLELWGYKRVEEIIWVKTNQLQRIIRTGRTGHWLNHSKEHCLVGIKGNPEVNRNIDTDV 588

Query: 604 IVAEVRETSRKPDEMYPMLERISPRTRKLELFARMHNAHAGWLSLGNQLNGVRLVDEGLR 663
           IVAEVRETSRKPDEMY MLERI PR RKLELFARMHNAHAGWLSLGNQLNGVRL++EGLR
Sbjct: 589 IVAEVRETSRKPDEMYAMLERIMPRARKLELFARMHNAHAGWLSLGNQLNGVRLINEGLR 648

Query: 664 ARYKAAYPDSEVQPPSPPRASA 685
           AR+KA+YP+ +VQPPSPPRASA
Sbjct: 649 ARFKASYPEIDVQPPSPPRASA 670



>AT4G09980.1 | chr4:6247978-6252030 REVERSE LENGTH=964
          Length = 963

 Score =  122 bits (305), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 108/189 (57%), Gaps = 32/189 (16%)

Query: 490 QFGVIMADPPWDIHME--------LPYGTMADDEMRTLNVPAL-QTDGLIFLWV-TGRAM 539
           +F VI+ DPPW+ ++         + Y T  D  +  L + A+  T   +FLWV  G  +
Sbjct: 637 KFDVILVDPPWEEYVHRAPGVSDSMEYWTFED--IINLKIEAIADTPSFLFLWVGDGVGL 694

Query: 540 ELGRECLELWGYKRVEEIIWVKTNQ------LQRIIRTGRTGHWLNHSKEHCLVGIKG-- 591
           E GR+CL+ WG++R E+I WVKTN+      L+   RT         SKEHCL+GIKG  
Sbjct: 695 EQGRQCLKKWGFRRCEDICWVKTNKSNAAPTLRHDSRT-----VFQRSKEHCLMGIKGTV 749

Query: 592 -----NPLVNRNIDTDVIVAEV--RETSRKPDEMYPMLERISPRTRKLELFARMHNAHAG 644
                  +++ NIDTDVI+AE     +++KP++MY ++E  +   R+LELF   HN  AG
Sbjct: 750 RRSTDGHIIHANIDTDVIIAEEPPYGSTQKPEDMYRIIEHFALGRRRLELFGEDHNIRAG 809

Query: 645 WLSLGNQLN 653
           WL++G  L+
Sbjct: 810 WLTVGKGLS 818



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.136    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,877,233
Number of extensions: 561192
Number of successful extensions: 1353
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1346
Number of HSP's successfully gapped: 3
Length of query: 706
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 600
Effective length of database: 8,200,473
Effective search space: 4920283800
Effective search space used: 4920283800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)