BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0663800 Os02g0663800|AK069605
(139 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G01750.1 | chr1:275528-276126 FORWARD LENGTH=141 239 3e-64
AT4G25590.1 | chr4:13059137-13060050 REVERSE LENGTH=138 236 2e-63
AT4G00680.1 | chr4:279780-280608 REVERSE LENGTH=141 236 3e-63
AT3G46010.2 | chr3:16909679-16910678 REVERSE LENGTH=151 227 1e-60
AT5G52360.1 | chr5:21258157-21259229 REVERSE LENGTH=138 227 2e-60
AT5G59890.1 | chr5:24122545-24123596 FORWARD LENGTH=140 224 1e-59
AT3G46000.1 | chr3:16907743-16908822 REVERSE LENGTH=138 219 3e-58
AT5G59880.1 | chr5:24120382-24121628 FORWARD LENGTH=140 217 2e-57
AT2G31200.1 | chr2:13294171-13294948 FORWARD LENGTH=147 183 3e-47
AT2G16700.1 | chr2:7244717-7245467 FORWARD LENGTH=144 176 4e-45
AT4G34970.1 | chr4:16653784-16654593 FORWARD LENGTH=142 175 6e-45
AT3G45990.1 | chr3:16900778-16904136 REVERSE LENGTH=134 141 1e-34
>AT1G01750.1 | chr1:275528-276126 FORWARD LENGTH=141
Length = 140
Score = 239 bits (611), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 110/137 (80%), Positives = 126/137 (91%)
Query: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
M+NSASGM V DECKLKFLELKAKR++RFIVFKI+EK QQV++D+LG P E+Y+DFT +
Sbjct: 1 MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60
Query: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
P DECRYAV+D+DF T ENCQKSKIFFI+W+PDTSRVRSKMLYASSKDRFKRELDGIQVE
Sbjct: 61 PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
Query: 121 LQATDPSEMSMDIVKSR 137
LQATDPSEMS+DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGR 137
>AT4G25590.1 | chr4:13059137-13060050 REVERSE LENGTH=138
Length = 137
Score = 236 bits (603), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 112/139 (80%), Positives = 130/139 (93%), Gaps = 2/139 (1%)
Query: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
M+N+ASGMAV DECKLKFLELK+KR++RFI+F+I+ QQVVV++LG P E+YDDFTA L
Sbjct: 1 MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDG--QQVVVEKLGNPDETYDDFTASL 58
Query: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
PA+ECRYAVFDFDF+TDENCQKSKIFFI+W+PD+SRVR KM+YASSKDRFKRELDGIQVE
Sbjct: 59 PANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 118
Query: 121 LQATDPSEMSMDIVKSRAL 139
LQATDPSEMS DI+KSRAL
Sbjct: 119 LQATDPSEMSFDIIKSRAL 137
>AT4G00680.1 | chr4:279780-280608 REVERSE LENGTH=141
Length = 140
Score = 236 bits (601), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 107/137 (78%), Positives = 127/137 (92%)
Query: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
M+NSASGM V DECK+KFLELKAKR++RFIVFKI+EK QQV +++LG P E+YDDFT+ +
Sbjct: 1 MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60
Query: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
P DECRYAV+DFDF T++NCQKSKIFFI+W+PDTSRVRSKMLYASSKDRFKRE++GIQVE
Sbjct: 61 PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120
Query: 121 LQATDPSEMSMDIVKSR 137
LQATDPSEMS+DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGR 137
>AT3G46010.2 | chr3:16909679-16910678 REVERSE LENGTH=151
Length = 150
Score = 227 bits (579), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 102/137 (74%), Positives = 126/137 (91%)
Query: 2 SNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP 61
+N+ASGMAV D+CKL+FLELKAKR+ RFIV+KI EK +QVVV+++GQP ++Y++F ACLP
Sbjct: 13 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72
Query: 62 ADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121
ADECRYA++DFDFVT ENCQKSKIFFI+W PD ++VRSKM+YASSKDRFKRELDGIQVEL
Sbjct: 73 ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132
Query: 122 QATDPSEMSMDIVKSRA 138
QATDP+EM +D+ +SRA
Sbjct: 133 QATDPTEMDLDVFRSRA 149
>AT5G52360.1 | chr5:21258157-21259229 REVERSE LENGTH=138
Length = 137
Score = 227 bits (578), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/139 (77%), Positives = 126/139 (90%), Gaps = 2/139 (1%)
Query: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
M+N+ASGMAV DECKLKFLELKAKR++RFI+F+I+ QQVVV++LG P E+YDDFT L
Sbjct: 1 MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDG--QQVVVEKLGSPQENYDDFTNYL 58
Query: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
P +ECRYAV+DFDF T EN QKSKIFFI+W+PD+SRVR KM+YASSKDRFKRELDGIQVE
Sbjct: 59 PPNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 118
Query: 121 LQATDPSEMSMDIVKSRAL 139
LQATDPSEMS+DI+KSRAL
Sbjct: 119 LQATDPSEMSLDIIKSRAL 137
>AT5G59890.1 | chr5:24122545-24123596 FORWARD LENGTH=140
Length = 139
Score = 224 bits (571), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 101/137 (73%), Positives = 125/137 (91%)
Query: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
M+N+ASGMAV D+CKL+FLELKAKR+ RFIV+KI EK +QV+V+++G+P +Y+DF A L
Sbjct: 1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60
Query: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
PADECRYA++DFDFVT ENCQKSKIFFI+W PD ++VRSKM+YASSKDRFKRELDGIQVE
Sbjct: 61 PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120
Query: 121 LQATDPSEMSMDIVKSR 137
LQATDP+EM +D++KSR
Sbjct: 121 LQATDPTEMDLDVLKSR 137
>AT3G46000.1 | chr3:16907743-16908822 REVERSE LENGTH=138
Length = 137
Score = 219 bits (559), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 101/137 (73%), Positives = 124/137 (90%), Gaps = 2/137 (1%)
Query: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
M+N+ASGMAV D+CKLKF+ELKAKR+FR IV+KI +K QV+V++LG+P +SYDDF A L
Sbjct: 1 MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDK--QVIVEKLGEPEQSYDDFAASL 58
Query: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
PAD+CRY ++DFDFVT ENCQKSKIFFI+W+PDT++VR KM+YASSKDRFKRELDGIQVE
Sbjct: 59 PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 118
Query: 121 LQATDPSEMSMDIVKSR 137
LQATDP+EM +D+ KSR
Sbjct: 119 LQATDPTEMGLDVFKSR 135
>AT5G59880.1 | chr5:24120382-24121628 FORWARD LENGTH=140
Length = 139
Score = 217 bits (552), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 94/138 (68%), Positives = 123/138 (89%)
Query: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
M+N+ASGMAV D+CKLKF+ELK KR+ RFI++KI E +QV+V+++G+PG++++D A L
Sbjct: 1 MANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASL 60
Query: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
PADECRYA+FDFDFV+ E +S+IFF++W+PDT+RVRSKM+YASSKDRFKRELDGIQVE
Sbjct: 61 PADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120
Query: 121 LQATDPSEMSMDIVKSRA 138
LQATDP+EM +D+ KSRA
Sbjct: 121 LQATDPTEMDLDVFKSRA 138
>AT2G31200.1 | chr2:13294171-13294948 FORWARD LENGTH=147
Length = 146
Score = 183 bits (464), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 109/136 (80%)
Query: 3 NSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPA 62
N+ SGM V DE K FLEL+ K++ R++VFKI+E ++VVV++ G P ESYDDF A LP
Sbjct: 10 NAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPD 69
Query: 63 DECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQ 122
++CRYAV+DFDFVT ENCQKSKIFF +W+P TS +R+K+LY++SKD+ REL GI E+Q
Sbjct: 70 NDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQ 129
Query: 123 ATDPSEMSMDIVKSRA 138
ATDP+E+ +++++ RA
Sbjct: 130 ATDPTEVDLEVLRERA 145
>AT2G16700.1 | chr2:7244717-7245467 FORWARD LENGTH=144
Length = 143
Score = 176 bits (445), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 105/135 (77%)
Query: 4 SASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPAD 63
+ +GM V DEC F+++K K+ R+IVFKI EK ++V VD++G GESY D LP D
Sbjct: 8 ATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVD 67
Query: 64 ECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQA 123
+CRYAVFDFDFVT +NC+KSKIFFI+W+P+ S++R+K+LYA+SKD +R L+GI ELQA
Sbjct: 68 DCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQA 127
Query: 124 TDPSEMSMDIVKSRA 138
TDP+EM DI++ RA
Sbjct: 128 TDPTEMGFDIIQDRA 142
>AT4G34970.1 | chr4:16653784-16654593 FORWARD LENGTH=142
Length = 141
Score = 175 bits (444), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 105/138 (76%)
Query: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
+ + SGM + D+CK F+E+K K+ R++V+K+ EK ++V VD++G GESYDD A L
Sbjct: 3 LKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASL 62
Query: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
P D+CRYAVFDFD+VT +NC+ SKIFFI+W+P+ SR+R KM+YA+SK +R LDG+ E
Sbjct: 63 PEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYE 122
Query: 121 LQATDPSEMSMDIVKSRA 138
LQATDP+EM D ++ RA
Sbjct: 123 LQATDPTEMGFDKIQDRA 140
>AT3G45990.1 | chr3:16900778-16904136 REVERSE LENGTH=134
Length = 133
Score = 141 bits (355), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 99/136 (72%), Gaps = 11/136 (8%)
Query: 8 MAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRL------GQPGESYDDFTACLP 61
M + D+CKL FLELK +R+FR IV+KI + +Q V+V++ G+ +SY++F LP
Sbjct: 1 MVLHDDCKLTFLELKERRTFRSIVYKIEDNMQ-VIVEKHHYKKMHGEREQSYEEFANSLP 59
Query: 62 ADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121
ADECRYA+ D +FV E KI FI+W+P T+++R KM+Y+S+KDRFKRELDGIQVE
Sbjct: 60 ADECRYAILDIEFVPGER----KICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEF 115
Query: 122 QATDPSEMSMDIVKSR 137
ATD +++S+D ++ R
Sbjct: 116 HATDLTDISLDAIRRR 131
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,794,669
Number of extensions: 104323
Number of successful extensions: 264
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 260
Number of HSP's successfully gapped: 12
Length of query: 139
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 51
Effective length of database: 8,693,961
Effective search space: 443392011
Effective search space used: 443392011
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 106 (45.4 bits)