BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0654400 Os02g0654400|AK069133
         (728 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G43130.2  | chr5:17315608-17321144 REVERSE LENGTH=853          275   8e-74
AT1G27720.1  | chr1:9643351-9647376 REVERSE LENGTH=721            211   2e-54

>AT5G43130.2 | chr5:17315608-17321144 REVERSE LENGTH=853
          Length = 852

 Score =  275 bits (702), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 171/359 (47%), Positives = 212/359 (59%), Gaps = 30/359 (8%)

Query: 385 KKTAGQKKSLEXXXXXXXXXXXXXXXXXXFQEQSFDQLNDVTAVSGVNLREEEEQLLSAP 444
           K + GQKK LE                    +QS +QLNDVTAVSGVNLREEEEQL S  
Sbjct: 500 KPSVGQKKPLETLGSSPPPPSKKQKVAGNSMDQSIEQLNDVTAVSGVNLREEEEQLFSGA 559

Query: 445 KEESWASEEARKIAQEEDGKLFLQKGPLLKKLAAIVPKCNLKSIGGDVEHCLSMCVEERL 504
           KE+   SE +R++  EE+ +L LQK PL +KLA I+ K  LK I  DVE CLS+CVEER+
Sbjct: 560 KEDGRVSEASRRVVHEEEERLILQKNPLQRKLAEIMAKAGLKQISNDVERCLSLCVEERM 619

Query: 505 RRFISTLIRVSKQRIDTEKSGHQLVITSDVGRQILRMNQKAKEEWDKKQAEETDKNKKQN 564
           R  +S +IR+SKQR+D EKS H+  ITSD+  QI  MNQK KEEW+KKQAE     K   
Sbjct: 620 RGLLSHIIRLSKQRVDAEKSRHRTFITSDIRLQINEMNQKVKEEWEKKQAEAEKLKKPSE 679

Query: 565 EVDGGGTVELDKEKEETRSKNAKPNKEEDDKMRTTAANVAARQAVGGSDMLSKWQLMAEQ 624
             +G G V+ +K+KE+ RSK  K NKE+DDKMRTTAANVAAR AVGG D   KWQLMAE 
Sbjct: 680 SEEGDGGVDSEKDKEDNRSKGVKGNKEDDDKMRTTAANVAARAAVGGDDAFLKWQLMAE- 738

Query: 625 ARQKREGLDLAASSQRGTASRSHMAGKGPTDHHEASKR---------------------- 662
           ARQK     ++ + + G    +   GK   D  +  +R                      
Sbjct: 739 ARQK----SVSEAGKDGNQKTTSGGGKNSKDRQDGGRRFSGTESSCGVGIVYRVSSSRFW 794

Query: 663 --THSAAFGTGGMNRQGRGPFAASHPKGPQRTISMKDVICVLEREPQMTKSRLIYRLYE 719
               S  F   G  R G+   ++  PK   RTIS+KDV+ VLEREPQM+KS L+YRL +
Sbjct: 795 FAMMSFGFLFAGGRRVGKNQGSSLQPK-VVRTISVKDVVAVLEREPQMSKSTLMYRLIQ 852




 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 45/59 (76%)

Query: 87  IPFNMLIPILQAHLDRDKDMQLQTVWAKLRRNEVHKDDFLRVIRNIVGDQMLKQAAHKV 145
           +PF  L+P L   LD+D+ +QL+T++A+L++NE+ K+ F R +++IVGDQML+ A  K+
Sbjct: 191 VPFAALLPTLMNQLDKDRALQLRTLYARLKKNEIPKEGFTRHMKDIVGDQMLRMAVSKL 249



>AT1G27720.1 | chr1:9643351-9647376 REVERSE LENGTH=721
          Length = 720

 Score =  211 bits (536), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/339 (41%), Positives = 189/339 (55%), Gaps = 48/339 (14%)

Query: 387 TAGQKKSLEXXXXXXXXXXXXXXXXXXFQEQSFDQLNDVTAVSGVNLREEEEQLL-SAPK 445
           + GQKK LE                    ++S ++ NDVTAVSG+NLREEE+QLL S PK
Sbjct: 428 SVGQKKPLEALGSSLPPSRKKQKICGTSSDESIEKFNDVTAVSGINLREEEKQLLDSGPK 487

Query: 446 EESWASEEARKIAQEEDGKLFLQKGPLLKKLAAIVPKCNLKSIGGDVEHCLSMCVEERLR 505
           +    S+  R++   E+ +  LQK PL +KL  I+ K  LK I  DVE CLS+CVEER+R
Sbjct: 488 KNDRVSKAYRRLVHGEEERTLLQKIPLQRKLTEIMGKSGLKHIDHDVERCLSLCVEERMR 547

Query: 506 RFISTLIRVSKQRIDTEKSGHQLVITSDVGRQILRMNQKAKEEWDKKQAEETDKNKKQNE 565
             +  +IR+SKQR D EK  ++  ITSD+ ++I  MNQK KEEW+KK + E +KNK    
Sbjct: 548 GLLFNIIRISKQRTDAEKCRNRTFITSDIRKEINEMNQKVKEEWEKKHSGE-EKNK---- 602

Query: 566 VDGGGTVELDKEKEETRSKNAKPNKEEDDKMRTTAANVAARQAVGGSDMLSKWQLMAEQA 625
                  E D EKE+ RS   K NK+++DK R  AANVA R AVGG D  SKW+LMAE A
Sbjct: 603 -------ENDTEKEDQRSNEVKANKKDEDKERAKAANVAVRAAVGGDDRFSKWKLMAE-A 654

Query: 626 RQKREGLDLAASSQRGTASRSHMAGKGPTDHHEASKRTHSAAFGTGGMNRQGRGPFAASH 685
           RQ+                    +  GP       + +   + GT     QG        
Sbjct: 655 RQR--------------------SSPGP------GRNSKKLSGGTQFGKNQGLPKVV--- 685

Query: 686 PKGPQRTISMKDVICVLEREPQMTKSRLIYRLYERLPGD 724
                R+IS+KDVI V+E+EPQM++S L+YR+Y R+  D
Sbjct: 686 -----RSISVKDVIAVVEKEPQMSRSTLLYRVYNRICSD 719



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.311    0.126    0.356 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,189,825
Number of extensions: 506081
Number of successful extensions: 2620
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2626
Number of HSP's successfully gapped: 3
Length of query: 728
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 622
Effective length of database: 8,200,473
Effective search space: 5100694206
Effective search space used: 5100694206
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 115 (48.9 bits)