BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0652800 Os02g0652800|AK063448
(494 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G17550.1 | chr4:9777938-9779738 REVERSE LENGTH=545 498 e-141
AT3G47420.1 | chr3:17472541-17474209 REVERSE LENGTH=524 464 e-131
AT1G30560.1 | chr1:10824761-10826293 FORWARD LENGTH=511 455 e-128
AT4G25220.1 | chr4:12921161-12922762 FORWARD LENGTH=505 454 e-128
AT2G13100.1 | chr2:5390206-5391764 FORWARD LENGTH=494 439 e-123
>AT4G17550.1 | chr4:9777938-9779738 REVERSE LENGTH=545
Length = 544
Score = 498 bits (1281), Expect = e-141, Method: Compositional matrix adjust.
Identities = 275/498 (55%), Positives = 323/498 (64%), Gaps = 59/498 (11%)
Query: 25 SYNSHRGLVLGLTFVAYALYHASRKPPSIVKRAL-------------------------- 58
S + R +L +TF+AYA YHASRKP SIVK L
Sbjct: 25 SPKTFRYAILFITFIAYACYHASRKPSSIVKSVLHPDSSTKPPQEHNSDKIYPWPMGNVF 84
Query: 59 ----------------SEAWPPFHDP---ALLGETDVAFLAFYSLGMFVAGHLGDRLDLR 99
S+ W PF+ + LGE DVAFLA YS+GM+VAGHLGD LDLR
Sbjct: 85 VKREIGDIDEVLLHRKSKGWEPFNGKDGTSRLGEIDVAFLACYSIGMYVAGHLGDSLDLR 144
Query: 100 LFLAVGMIGSGTAVALFGVGYFLSLHSLAFYLAAQVIAGLLQSTGWPSVVAIVGNWFRGR 159
LFL GMIGSG V LFG+GYF ++H+ F+L Q+ AGL Q+TGWPSVVA+VGNWF R
Sbjct: 145 LFLTWGMIGSGFFVGLFGMGYFWNIHAFWFFLVMQMAAGLFQATGWPSVVAVVGNWFGKR 204
Query: 160 RRGLIMGIWNAHTSIGNISGSLIAAAVLRYGWGWSFIVPGLLIAFGGVLVFFFLAPYPED 219
+RGLIMGIWNAHTS+GNI GSLIAA VL YGWGWSFI PG +++ GGVLV+ FLA YPED
Sbjct: 205 KRGLIMGIWNAHTSVGNICGSLIAAGVLEYGWGWSFIAPGFVMSLGGVLVYLFLAAYPED 264
Query: 220 LGFSPTTLPKXXXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXXVGMWKA 265
+GF VG+ +A
Sbjct: 265 VGFPDINSNSGKFIKRKRDVEEEEEEVEEDLGTDVEGDGEGSSGSGSGYENKRSVGLLQA 324
Query: 266 FAIPGVITFALCLFFAKLVAYTFLYWLPFYLSQTAIGGKEMSVTSAGYLSALFDVXXXXX 325
IPGVI FALCLFF+KLVAYTFLYWLPFYLSQT IGG+ +SV +AG LS LFDV
Sbjct: 325 CMIPGVIPFALCLFFSKLVAYTFLYWLPFYLSQTTIGGEYVSVKTAGNLSTLFDVGGIVG 384
Query: 326 XXLAGFISDHLNARATTAAIFMYLAIPSLYAFHAYGSTSEVANIGLMMISGLFVNGPYAL 385
L G+ISD ARATTAA FMY AIP++ +H+YG S+ NI LMM++GLFVNGPYAL
Sbjct: 385 GILCGYISDKFKARATTAAAFMYAAIPAMLVYHSYGGVSQTVNILLMMVAGLFVNGPYAL 444
Query: 386 ITTAVSADLGTHKSLKGDSRALATVTSIIDGTGSLGAALGPFITGFISKRGWDSVFTMLI 445
ITTAVSADLGTHKSL+GDSRALATVT+IIDGTGS GAALGP +TGF+S GW +VF ML+
Sbjct: 445 ITTAVSADLGTHKSLQGDSRALATVTAIIDGTGSAGAALGPLLTGFLSTLGWQAVFYMLV 504
Query: 446 FCALAAGVLLSRIVKSEI 463
AL AG+LL+R+V +EI
Sbjct: 505 VGALCAGLLLTRLVIAEI 522
>AT3G47420.1 | chr3:17472541-17474209 REVERSE LENGTH=524
Length = 523
Score = 464 bits (1194), Expect = e-131, Method: Compositional matrix adjust.
Identities = 255/477 (53%), Positives = 327/477 (68%), Gaps = 30/477 (6%)
Query: 24 ISYNSHRGLVLGLTFVAYALYHASRKPPSIVKRALSEA---------------------- 61
+SY++++ +VL +TF+AYA YHA+RK SIVK AL
Sbjct: 29 LSYSAYQAIVLIVTFLAYASYHAARKTTSIVKSALDPQSPDTGLNSLLLRFTSFGSSVKE 88
Query: 62 ---WPPFHDP---ALLGETDVAFLAFYSLGMFVAGHLGDRLDLRLFLAVGMIGSGTAVAL 115
W PF+ P LLGE DVAFLA Y+ GM+ AGHLGDR++LR+FL VGMIG+G +L
Sbjct: 89 EGGWAPFNGPDGTVLLGEIDVAFLAVYAFGMYFAGHLGDRMNLRIFLTVGMIGTGLFTSL 148
Query: 116 FGVGYFLSLHSLAFYLAAQVIAGLLQSTGWPSVVAIVGNWFRGRRRGLIMGIWNAHTSIG 175
FGVGY+ ++HS ++L Q++AGL QS+GWPSVVA+VGNWF ++RGLIMGIWNAHTS+G
Sbjct: 149 FGVGYWGNIHSFYYFLIMQMLAGLFQSSGWPSVVAVVGNWFNKKKRGLIMGIWNAHTSVG 208
Query: 176 NISGSLIAAAVLRYGWGWSFIVPGLLIAFGGVLVFFFLAPYPEDLGFSPTTLPKXXXXXX 235
NI+GSLIAAA+LRYGWGWSF+VPG++I G++ + FL PE++G +
Sbjct: 209 NITGSLIAAAMLRYGWGWSFVVPGVIIVVIGLVNYAFLPVSPENVGAERDEVLDSSSEKI 268
Query: 236 XXXXXXXXXXXXXXXXXXXXXXXXVGMWKAFAIPGVITFALCLFFAKLVAYTFLYWLPFY 295
VG +A+ IPGV FALCLFFAKLVAYTFLYWLPFY
Sbjct: 269 GNSVNEPLLLSSSDSETDDKKRA-VGFIEAWRIPGVAPFALCLFFAKLVAYTFLYWLPFY 327
Query: 296 LSQTAIGGKEMSVTSAGYLSALFDVXXXXXXXLAGFISDHLNARATTAAIFMYLAIPSLY 355
+S TAI G+ +S +AG LS +FDV +AG+ISD + ARA TAA FMY +IP+L+
Sbjct: 328 VSHTAIEGEYLSDETAGNLSTMFDVGGVVGGIMAGYISDRIGARAITAASFMYCSIPALF 387
Query: 356 AFHAYGSTSEVANIGLMMISGLFVNGPYALITTAVSADLGTHKSLKGDSRALATVTSIID 415
+ +YG S +AN LM ++G+ VNGPYALITTAVSADLGTH SLKG+SRALATVT+IID
Sbjct: 388 FYRSYGHVSLLANASLMFLTGMLVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIID 447
Query: 416 GTGSLGAALGPFITGFISKRG-WDSVFTMLIFCALAAGVLLSRIVKSEIVHIIQNRR 471
GTGS+GAA+GP +TG+IS RG W +VFTML+ A AG+LL+R+V +E+ I R
Sbjct: 448 GTGSVGAAVGPLLTGYISSRGSWTAVFTMLMGAAFVAGLLLTRLVMAEVAEKIAESR 504
>AT1G30560.1 | chr1:10824761-10826293 FORWARD LENGTH=511
Length = 510
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/483 (49%), Positives = 317/483 (65%), Gaps = 21/483 (4%)
Query: 24 ISYNSHRGLVLGLTFVAYALYHASRKPPSIVKRALSE------------AWPPFHDP--- 68
+S+ ++ +V LTF+AY +HA+RKP SIVK LSE W PF P
Sbjct: 31 LSFKQYQAMVFVLTFIAYIAFHATRKPNSIVKGTLSEQPTGHFKGADKGGWAPFDGPDGT 90
Query: 69 ALLGETDVAFLAFYSLGMFVAGHLGDRLDLRLFLAVGMIGSGTAVALFGVGYFLSLHSLA 128
ALLG+ D+AFL+ Y++GMFVAGHLGDRLDLR FL +GM+G+G ALFGV ++ ++H+
Sbjct: 91 ALLGQIDLAFLSVYAVGMFVAGHLGDRLDLRTFLTIGMVGTGVCTALFGVAFWANIHAFY 150
Query: 129 FYLAAQVIAGLLQSTGWPSVVAIVGNWFRGRRRGLIMGIWNAHTSIGNISGSLIAAAVLR 188
++LA Q +AG QS GWP VVA++GNWF +RRG+IMG+W+AHTS+GNI G+LIA +L+
Sbjct: 151 YFLAIQTLAGWFQSIGWPCVVAVLGNWFDKKRRGVIMGVWSAHTSLGNIIGTLIATGLLK 210
Query: 189 YGWGWSFIVPGLLIAFGGVLVFFFLAPYPEDLGFSPTTLPKXXXXXXXXXXXXXXXXXXX 248
+GWGWSF+ P LLI F G++V+ FL P +
Sbjct: 211 FGWGWSFVGPALLITFLGIVVYLFLPVNPHAV---EAERDGSEVDSTMRLGDTITESFLS 267
Query: 249 XXXXXXXXXXXVGMWKAFAIPGVITFALCLFFAKLVAYTFLYWLPFYLSQTAIGGKEMSV 308
VG A+ IPGV FA CLFF KLV+YTFLYWLPFY+SQT IGG+++S
Sbjct: 268 SRTSTGFDRRAVGFLAAWKIPGVAPFAFCLFFTKLVSYTFLYWLPFYVSQTEIGGEQLSQ 327
Query: 309 TSAGYLSALFDVXXXXXXXLAGFISDHLNARATTAAIFMYLAIPSLYAFHAYGSTSEVAN 368
++G LS LFDV LAG+ SD L+ RA TA F+YL IP+L+ + YG S N
Sbjct: 328 ETSGNLSTLFDVGGVVGGILAGYFSDQLDGRAITAGGFIYLTIPALFLYRIYGHVSMTIN 387
Query: 369 IGLMMISGLFVNGPYALITTAVSADLGTHKSLKGDSRALATVTSIIDGTGSLGAALGPFI 428
I LM ++GLFVNGPYALITTAV+ADLGTHKSLKG++RALATVT+IIDGTGS+GAA+GP +
Sbjct: 388 IILMFVAGLFVNGPYALITTAVAADLGTHKSLKGNARALATVTAIIDGTGSVGAAIGPVL 447
Query: 429 TGFISKRGWDSVFTMLIFCALAAGVLLSRIVKSEIVHIIQNRRNHTLDMHNRTADSGAQP 488
TG+I+ WD+VF ML+ AL +G+LL+ ++ E+ ++ H A S ++P
Sbjct: 448 TGYIAAISWDAVFYMLMTAALISGLLLTTLIIEEVKTLLYGSSEED---HEVAAASTSRP 504
Query: 489 LLE 491
++
Sbjct: 505 PID 507
>AT4G25220.1 | chr4:12921161-12922762 FORWARD LENGTH=505
Length = 504
Score = 454 bits (1169), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/461 (51%), Positives = 314/461 (68%), Gaps = 17/461 (3%)
Query: 24 ISYNSHRGLVLGLTFVAYALYHASRKPPSIVKRALSEA-----WPPFHDP---ALLGETD 75
+S+ ++ LV LTFVAY +HA+RKP SIVK LS + W PF P ALLG+ D
Sbjct: 31 LSFKQYQALVFILTFVAYIAFHAARKPNSIVKGTLSASTIEGGWAPFDGPDGTALLGQID 90
Query: 76 VAFLAFYSLGMFVAGHLGDRLDLRLFLAVGMIGSGTAVALFGVGYFLSLHSLAFYLAAQV 135
+AFL+ Y++GMFVAGHLGDRLDLR FL +GMIG+G ALFGV ++ + HS ++LA QV
Sbjct: 91 LAFLSVYAVGMFVAGHLGDRLDLRTFLTIGMIGTGLFTALFGVAFWANFHSFYYFLAVQV 150
Query: 136 IAGLLQSTGWPSVVAIVGNWFRGRRRGLIMGIWNAHTSIGNISGSLIAAAVLRYGWGWSF 195
+AGL QS GWP +VA++GNWF +RRG+IMG+W+AHTS+GNI+GSLIA+ +LRYGWGWSF
Sbjct: 151 MAGLFQSIGWPCIVAVLGNWFDKKRRGMIMGVWSAHTSLGNIAGSLIASGLLRYGWGWSF 210
Query: 196 IVPGLLIAFGGVLVFFFLAPYPEDLGFSPTTLPKXXXXXXXXXXXXXXXXXXXXXXXXXX 255
+ P L+ F G++V+ FL P PT +
Sbjct: 211 LGPAFLMTFLGIVVYLFLPVNP------PTVEAERDGTEIDSTMRLGDTITESLLESRMS 264
Query: 256 X---XXXVGMWKAFAIPGVITFALCLFFAKLVAYTFLYWLPFYLSQTAIGGKEMSVTSAG 312
VG A+ IPGV FA CLFF KLV+YTFLYWLPFY+S IGG+ +S ++G
Sbjct: 265 TGFDRKAVGFMAAWKIPGVAPFAFCLFFTKLVSYTFLYWLPFYVSHNMIGGEYLSEETSG 324
Query: 313 YLSALFDVXXXXXXXLAGFISDHLNARATTAAIFMYLAIPSLYAFHAYGSTSEVANIGLM 372
LS +FDV LAG+ISD LN RA TAA FMYLAIP+L+ + +G S N+ LM
Sbjct: 325 NLSTIFDVGGVVGGVLAGYISDQLNGRAITAAGFMYLAIPALFLYRVFGHISLTINVILM 384
Query: 373 MISGLFVNGPYALITTAVSADLGTHKSLKGDSRALATVTSIIDGTGSLGAALGPFITGFI 432
SG+F+ GP+ALITTAVSADLGTHKSLKG++RALATV++IIDGTGS+GAA+GP +TG+I
Sbjct: 385 FTSGVFIIGPFALITTAVSADLGTHKSLKGNARALATVSAIIDGTGSVGAAIGPVLTGYI 444
Query: 433 SKRGWDSVFTMLIFCALAAGVLLSRIVKSEIVHIIQNRRNH 473
S WD+VF ML+ AL +G+LL++++ +E+ ++ +
Sbjct: 445 SAISWDAVFYMLMTAALISGLLLTKLIIAEVKALLFGSEDE 485
>AT2G13100.1 | chr2:5390206-5391764 FORWARD LENGTH=494
Length = 493
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/459 (51%), Positives = 303/459 (66%), Gaps = 17/459 (3%)
Query: 22 PAISYNSHRGLVLGLTFVAYALYHASRKPPSIVKRAL----------SEAWPPFHDP--- 68
P ++ H+ LVL +TF AYA +HASRKPPSIVK L W PF+
Sbjct: 21 PHKTFTFHQILVLIITFTAYASFHASRKPPSIVKSVLGPPSLNSSSIDNGWAPFNGTQGT 80
Query: 69 ALLGETDVAFLAFYSLGMFVAGHLGDRLDLRLFLAVGMIGSGTAVALFGVGYFLSLHSLA 128
LGE D+AFL+ Y+LGM+ AGHLGDR+DLR FL GM+GSG +FG+GY++++H+L
Sbjct: 81 KRLGELDLAFLSSYALGMYFAGHLGDRIDLRYFLVFGMMGSGILTLVFGLGYWMNVHTLG 140
Query: 129 FYLAAQVIAGLLQSTGWPSVVAIVGNWFRGRRRGLIMGIWNAHTSIGNISGSLIAAAVLR 188
FY++ Q++ GL QS GWP VV++VGNW +RGLIMG+WN+HTS+GNI GS+IA++VL
Sbjct: 141 FYMSVQIVCGLFQSIGWPCVVSVVGNWCGKEKRGLIMGLWNSHTSVGNILGSVIASSVLD 200
Query: 189 YGWGWSFIVPGLLIAFGGVLVFFFLAPYPEDLGFS----PTTLPKXXXXXXXXXXXXXXX 244
+GWGWSF++PG+L+ GV+VF FL P DLGF +
Sbjct: 201 FGWGWSFVLPGVLVLVSGVVVFMFLVVSPNDLGFEELGKEIEIEMSLGENVEESLRKHEA 260
Query: 245 XXXXXXXXXXXXXXXVGMWKAFAIPGVITFALCLFFAKLVAYTFLYWLPFYLSQTAIGGK 304
+G +A+ +PGV +A CLFF+KLVAYTFLYWLP+YL TA+ G
Sbjct: 261 EGAVLLENVDDSSFAIGFLEAWRLPGVAPYAFCLFFSKLVAYTFLYWLPYYLRHTAVAGV 320
Query: 305 EMSVTSAGYLSALFDVXXXXXXXLAGFISDHLNARATTAAIFMYLAIPSLYAFHAYGSTS 364
+S +AG LS +FDV AGFISD + ARA T+ F+ L+IP+L + YGS S
Sbjct: 321 NLSHKTAGILSTVFDVGGVLGGISAGFISDKIKARALTSITFLALSIPALIMYRVYGSVS 380
Query: 365 EVANIGLMMISGLFVNGPYALITTAVSADLGTHKSLKGDSRALATVTSIIDGTGSLGAAL 424
NI LM ISGL VNGPYALITTAV+ADLGT S+KG+ RALATVT+IIDGTGS+GAAL
Sbjct: 381 MFINIVLMFISGLLVNGPYALITTAVAADLGTQDSIKGNGRALATVTAIIDGTGSVGAAL 440
Query: 425 GPFITGFISKRGWDSVFTMLIFCALAAGVLLSRIVKSEI 463
GP + G+IS RGW+SVF MLI AG+ L R+ KSEI
Sbjct: 441 GPLLAGYISSRGWNSVFFMLIVSIFFAGLFLVRLAKSEI 479
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.327 0.141 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,861,273
Number of extensions: 325353
Number of successful extensions: 1056
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1052
Number of HSP's successfully gapped: 11
Length of query: 494
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 391
Effective length of database: 8,282,721
Effective search space: 3238543911
Effective search space used: 3238543911
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 114 (48.5 bits)