BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0648300 Os02g0648300|015-041-D07
(442 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76890.2 | chr1:28873211-28875203 REVERSE LENGTH=576 168 7e-42
AT1G76880.1 | chr1:28865594-28867931 FORWARD LENGTH=604 161 8e-40
AT1G33240.1 | chr1:12051859-12054320 REVERSE LENGTH=670 147 8e-36
AT5G28300.1 | chr5:10292789-10295101 REVERSE LENGTH=620 117 2e-26
AT5G47660.1 | chr5:19313008-19314636 FORWARD LENGTH=399 98 9e-21
AT3G10000.1 | chr3:3076874-3078907 FORWARD LENGTH=482 85 8e-17
AT5G03680.1 | chr5:957858-960760 FORWARD LENGTH=592 79 5e-15
AT3G25990.1 | chr3:9504846-9506703 REVERSE LENGTH=373 63 2e-10
AT1G13450.1 | chr1:4612999-4615115 REVERSE LENGTH=407 56 5e-08
>AT1G76890.2 | chr1:28873211-28875203 REVERSE LENGTH=576
Length = 575
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 118/227 (51%), Gaps = 4/227 (1%)
Query: 2 AMFEGMMRQVTEKQDAMQRVFLETLXXXXXXXXXXXXXXXXXXVARINREREQLSKERXX 61
+F + +++ EKQ+ MQ+ FLETL + RINRE E L ER
Sbjct: 263 GLFTKLTKELMEKQEKMQKRFLETLEYREKERISREEAWRVQEIGRINREHETLIHERSN 322
Query: 62 XXXXXXXXXXFLQRVGGAGGEPVRL---SPSSXXXXXXXXXXXGLQLVPVPXXXXXXXXX 118
FL ++ G + + PS P
Sbjct: 323 AAAKDAAIISFLHKISGGQPQQPQQHNHKPSQRKQYQSDHSITFESKEPR-AVLLDTTIK 381
Query: 119 XXXXXXXXXXXXXXXRWPKEEVQALIDLRMEKEEQYNDMGPKGPLWEEIAAGMQRIGYNR 178
RWPK EV+ALI +R E Y + G KGPLWEEI+AGM+R+GYNR
Sbjct: 382 MGNYDNNHSVSPSSSRWPKTEVEALIRIRKNLEANYQENGTKGPLWEEISAGMRRLGYNR 441
Query: 179 SAKRCKEKWENINKYFKKVKESNKRRPEDSKTCPYFHQLDAIYRKKH 225
SAKRCKEKWENINKYFKKVKESNK+RP DSKTCPYFHQL+A+Y +++
Sbjct: 442 SAKRCKEKWENINKYFKKVKESNKKRPLDSKTCPYFHQLEALYNERN 488
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 134 RWPKEEVQALIDLRMEKEEQYNDMGPKGPLWEEIAAGMQRIGYNRSAKRCKEKWENINKY 193
RWP+ E AL+ +R E ++ + D K PLWEEI+ M +GY RS+K+CKEK+EN+ KY
Sbjct: 41 RWPRPETLALLRIRSEMDKAFRDSTLKAPLWEEISRKMMELGYKRSSKKCKEKFENVYKY 100
Query: 194 FKKVKESNKRRPEDSKTCPYFHQLDAI 220
K+ KE + E KT +F +L+A
Sbjct: 101 HKRTKEGRTGKSE-GKTYRFFEELEAF 126
>AT1G76880.1 | chr1:28865594-28867931 FORWARD LENGTH=604
Length = 603
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 84/92 (91%)
Query: 134 RWPKEEVQALIDLRMEKEEQYNDMGPKGPLWEEIAAGMQRIGYNRSAKRCKEKWENINKY 193
RWPK E++ALI LR + +Y + GPKGPLWEEI+AGM+R+G+NR++KRCKEKWENINKY
Sbjct: 408 RWPKVEIEALIKLRTNLDSKYQENGPKGPLWEEISAGMRRLGFNRNSKRCKEKWENINKY 467
Query: 194 FKKVKESNKRRPEDSKTCPYFHQLDAIYRKKH 225
FKKVKESNK+RPEDSKTCPYFHQLDA+YR+++
Sbjct: 468 FKKVKESNKKRPEDSKTCPYFHQLDALYRERN 499
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 134 RWPKEEVQALIDLRMEKEEQYNDMGPKGPLWEEIAAGMQRIGYNRSAKRCKEKWENINKY 193
RWP++E AL+ +R + + D KGPLWEE++ M GY R+AK+CKEK+EN+ KY
Sbjct: 61 RWPRQETLALLKIRSDMGIAFRDASVKGPLWEEVSRKMAEHGYIRNAKKCKEKFENVYKY 120
Query: 194 FKKVKESNKRRPEDSKTCPYFHQLDAI 220
K+ KE + E KT +F QL+A+
Sbjct: 121 HKRTKEGRTGKSE-GKTYRFFDQLEAL 146
>AT1G33240.1 | chr1:12051859-12054320 REVERSE LENGTH=670
Length = 669
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 77/91 (84%)
Query: 134 RWPKEEVQALIDLRMEKEEQYNDMGPKGPLWEEIAAGMQRIGYNRSAKRCKEKWENINKY 193
RWPK E+ ALI+LR E +Y D PKG LWEEI+ M+R+GYNR+AKRCKEKWENINKY
Sbjct: 435 RWPKAEILALINLRSGMEPRYQDNVPKGLLWEEISTSMKRMGYNRNAKRCKEKWENINKY 494
Query: 194 FKKVKESNKRRPEDSKTCPYFHQLDAIYRKK 224
+KKVKESNK+RP+D+KTCPYFH+LD +YR K
Sbjct: 495 YKKVKESNKKRPQDAKTCPYFHRLDLLYRNK 525
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 134 RWPKEEVQALIDLRMEKEEQYNDMGPKGPLWEEIAAGMQRIGYNRSAKRCKEKWENINKY 193
RWP+EE AL+ +R + + + D K PLWE ++ + +GY RS+K+CKEK+EN+ KY
Sbjct: 62 RWPREETLALLRIRSDMDSTFRDATLKAPLWEHVSRKLLELGYKRSSKKCKEKFENVQKY 121
Query: 194 FKKVKESNKRRPEDSKTCPYFHQLDAI 220
+K+ KE+ R D K +F QL+A+
Sbjct: 122 YKRTKETRGGR-HDGKAYKFFSQLEAL 147
>AT5G28300.1 | chr5:10292789-10295101 REVERSE LENGTH=620
Length = 619
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 67/98 (68%), Gaps = 10/98 (10%)
Query: 134 RWPKEEVQALIDLRM---------EKEEQYNDMGPKG-PLWEEIAAGMQRIGYNRSAKRC 183
RWPK+EV ALI++R K+E K PLWE I+ M IGY RSAKRC
Sbjct: 459 RWPKDEVLALINIRRSISNMNDDDHKDENSLSTSSKAVPLWERISKKMLEIGYKRSAKRC 518
Query: 184 KEKWENINKYFKKVKESNKRRPEDSKTCPYFHQLDAIY 221
KEKWENINKYF+K K+ NK+RP DS+TCPYFHQL A+Y
Sbjct: 519 KEKWENINKYFRKTKDVNKKRPLDSRTCPYFHQLTALY 556
>AT5G47660.1 | chr5:19313008-19314636 FORWARD LENGTH=399
Length = 398
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
Query: 134 RWPKEEVQALIDLRMEKEEQYNDMGPKGPLWEEIAAGMQRIGYNRSAKRCKEKWENINKY 193
RWP+EEVQALI R + EE+ KG +W+EI+A M+ GY RSAK+CKEKWEN+NKY
Sbjct: 303 RWPQEEVQALISSRSDVEEKTGI--NKGAIWDEISARMKERGYERSAKKCKEKWENMNKY 360
Query: 194 FKKVKESNKRRPEDSKTCPYFHQLDAIYR 222
+++V E +++PE SKT YF +L Y+
Sbjct: 361 YRRVTEGGQKQPEHSKTRSYFEKLGNFYK 389
>AT3G10000.1 | chr3:3076874-3078907 FORWARD LENGTH=482
Length = 481
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 134 RWPKEEVQALIDLRMEKEEQYNDMGPKGPLWEEIAAGM-QRIGYNRSAKRCKEKWENINK 192
RWP++E L+++R + ++ + KGPLW+E++ M + GY RS K+C+EK+EN+ K
Sbjct: 88 RWPRQETLMLLEVRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYTRSGKKCREKFENLYK 147
Query: 193 YFKKVKESNKRRPEDSKTCPYFHQLDAIY 221
Y+KK KE R +D K +F QL+AIY
Sbjct: 148 YYKKTKEGKSGRRQDGKNYRFFRQLEAIY 176
>AT5G03680.1 | chr5:957858-960760 FORWARD LENGTH=592
Length = 591
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Query: 134 RWPKEEVQALIDLRMEKEEQYNDMGPKGPLWEEIAAGM-QRIGYNRSAKRCKEKWENINK 192
RWP++E L+++R + ++ + KGPLW+E++ M + GY RS K+C+EK+EN+ K
Sbjct: 119 RWPRQETLTLLEIRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYK 178
Query: 193 YFKKVKESNKRRPEDSKTCPYFHQLDAIY 221
Y++K KE R +D K +F QL+A+Y
Sbjct: 179 YYRKTKEGKAGR-QDGKHYRFFRQLEALY 206
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 135 WPKEEVQALIDLRMEKEEQYNDM---GPKGPLWEEIAAGMQRIGYN-RSAKRCKEKWENI 190
W ++E+ L+++R + + ++ LWEEIAA + ++G++ RSA CKEKWE I
Sbjct: 422 WGEQEILKLMEIRTSMDSTFQEILGGCSDEFLWEEIAAKLIQLGFDQRSALLCKEKWEWI 481
Query: 191 -NKYFKKVKESNKRRPEDSKTCPYFH 215
N K+ K+ NK+R ++S +C ++
Sbjct: 482 SNGMRKEKKQINKKRKDNSSSCGVYY 507
>AT3G25990.1 | chr3:9504846-9506703 REVERSE LENGTH=373
Length = 372
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 135 WPKEEVQALIDLRMEKEEQYNDMGPKGPLWEEIAAGMQRIGYNRSAKRCKEKWENINKYF 194
W ++E + LI LR E + +N LWE+I+ M+ G++RS C +KW NI K F
Sbjct: 55 WAQDETRTLISLRREMDNLFNTSKSNKHLWEQISKKMREKGFDRSPSMCTDKWRNILKEF 114
Query: 195 KKVKE-SNKRRPEDSKTCPYFHQLDAIYRKK 224
KK K+ +K S Y+++++ I+R++
Sbjct: 115 KKAKQHEDKATSGGSTKMSYYNEIEDIFRER 145
>AT1G13450.1 | chr1:4612999-4615115 REVERSE LENGTH=407
Length = 406
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 135 WPKEEVQALIDLRMEKEEQYNDMGPKGPLWEEIAAGMQRIGYNRSAKRCKEKWENINKYF 194
W ++E ++LI R + +N LWE+I++ M+ G++RS C +KW N+ K F
Sbjct: 87 WVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEF 146
Query: 195 KKVKESNKRRPEDSKTCPYFHQLDAIYRKK 224
KK K + R S Y+ +++ I R++
Sbjct: 147 KKAKHHD--RGNGSAKMSYYKEIEDILRER 174
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,979,557
Number of extensions: 224063
Number of successful extensions: 616
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 610
Number of HSP's successfully gapped: 16
Length of query: 442
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 340
Effective length of database: 8,310,137
Effective search space: 2825446580
Effective search space used: 2825446580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)