BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0645600 Os02g0645600|AK109477
(387 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66320.1 | chr5:26496208-26497309 REVERSE LENGTH=340 140 9e-34
AT3G51080.1 | chr3:18973639-18974668 FORWARD LENGTH=313 138 5e-33
AT4G36240.1 | chr4:17147376-17148211 REVERSE LENGTH=239 127 7e-30
AT4G32890.1 | chr4:15875598-15876615 FORWARD LENGTH=309 126 2e-29
AT3G60530.1 | chr3:22373348-22374147 FORWARD LENGTH=241 125 5e-29
AT5G25830.1 | chr5:9004398-9005502 REVERSE LENGTH=332 124 1e-28
AT3G24050.1 | chr3:8686060-8687462 FORWARD LENGTH=275 123 1e-28
AT2G45050.1 | chr2:18582958-18583845 FORWARD LENGTH=265 123 2e-28
AT1G08010.1 | chr1:2486202-2487402 REVERSE LENGTH=304 120 1e-27
AT3G54810.2 | chr3:20296957-20298236 FORWARD LENGTH=323 119 3e-27
AT4G34680.1 | chr4:16553700-16554610 FORWARD LENGTH=270 117 7e-27
AT1G08000.1 | chr1:2483460-2484564 REVERSE LENGTH=309 116 2e-26
AT3G45170.1 | chr3:16537538-16538232 FORWARD LENGTH=205 112 3e-25
AT2G28340.1 | chr2:12103672-12106172 FORWARD LENGTH=292 103 2e-22
AT4G36620.1 | chr4:17268906-17269662 REVERSE LENGTH=212 55 8e-08
AT2G18380.1 | chr2:7982868-7984017 REVERSE LENGTH=209 55 9e-08
AT4G26150.1 | chr4:13253210-13254659 FORWARD LENGTH=353 54 1e-07
AT3G50870.1 | chr3:18911112-18912369 FORWARD LENGTH=296 54 2e-07
AT5G56860.1 | chr5:22989630-22991351 REVERSE LENGTH=399 54 2e-07
AT3G06740.1 | chr3:2126658-2127265 FORWARD LENGTH=150 54 2e-07
AT5G49300.1 | chr5:19984849-19985475 REVERSE LENGTH=140 53 3e-07
AT5G26930.1 | chr5:9479592-9480061 FORWARD LENGTH=121 52 4e-07
AT5G47140.1 | chr5:19145108-19147303 FORWARD LENGTH=471 51 1e-06
AT4G16141.1 | chr4:9131872-9132893 REVERSE LENGTH=198 50 3e-06
AT3G16870.1 | chr3:5763752-5764576 REVERSE LENGTH=191 49 3e-06
>AT5G66320.1 | chr5:26496208-26497309 REVERSE LENGTH=340
Length = 339
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 63/69 (91%), Positives = 65/69 (94%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSLHSNSHRK 363
R+CSHCGVQKTPQWRAGP GAKTLCNACGVRYKSGRLLPEYRPACSPTF S LHSN HRK
Sbjct: 249 RKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRK 308
Query: 364 VLEMRRKKE 372
V+EMRRKKE
Sbjct: 309 VIEMRRKKE 317
>AT3G51080.1 | chr3:18973639-18974668 FORWARD LENGTH=313
Length = 312
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 62/70 (88%), Positives = 64/70 (91%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSLHSNSHRK 363
R+C HCGVQKTPQWRAGP GAKTLCNACGVRYKSGRLLPEYRPACSPTF S LHSN H K
Sbjct: 221 RQCGHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHSK 280
Query: 364 VLEMRRKKET 373
V+EMRRKKET
Sbjct: 281 VIEMRRKKET 290
>AT4G36240.1 | chr4:17147376-17148211 REVERSE LENGTH=239
Length = 238
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 57/68 (83%), Positives = 61/68 (89%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSLHSNSHRK 363
R CSHCGVQKTPQWR GP GAKTLCNACGVR+KSGRLLPEYRPACSPTF + +HSNSHRK
Sbjct: 164 RCCSHCGVQKTPQWRMGPLGAKTLCNACGVRFKSGRLLPEYRPACSPTFTNEIHSNSHRK 223
Query: 364 VLEMRRKK 371
VLE+R K
Sbjct: 224 VLELRLMK 231
>AT4G32890.1 | chr4:15875598-15876615 FORWARD LENGTH=309
Length = 308
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 61/71 (85%)
Query: 302 GDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSLHSNSH 361
G RRC HC +KTPQWR GP G KTLCNACGVRYKSGRL+PEYRPA SPTFV + HSNSH
Sbjct: 195 GGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTFVMARHSNSH 254
Query: 362 RKVLEMRRKKE 372
RKV+E+RR+KE
Sbjct: 255 RKVMELRRQKE 265
>AT3G60530.1 | chr3:22373348-22374147 FORWARD LENGTH=241
Length = 240
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 62/71 (87%)
Query: 302 GDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSLHSNSH 361
G RRC+HC +KTPQWR GP G KTLCNACGVRYKSGRL+PEYRPA SPTFV + HSNSH
Sbjct: 156 GARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVLTQHSNSH 215
Query: 362 RKVLEMRRKKE 372
RKV+E+RR+KE
Sbjct: 216 RKVMELRRQKE 226
>AT5G25830.1 | chr5:9004398-9005502 REVERSE LENGTH=332
Length = 331
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 60/70 (85%)
Query: 303 DRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSLHSNSHR 362
+RRC HC KTPQWR GP G KTLCNACGVRYKSGRL+PEYRPA SPTFV + HSNSHR
Sbjct: 218 ERRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHSNSHR 277
Query: 363 KVLEMRRKKE 372
KV+E+RR+KE
Sbjct: 278 KVMELRRQKE 287
>AT3G24050.1 | chr3:8686060-8687462 FORWARD LENGTH=275
Length = 274
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 52/70 (74%), Positives = 62/70 (88%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSLHSNSHRK 363
R+C HCG +KTPQWRAGP G KTLCNACGVRYKSGRL+PEYRPA SPTF + LHSNSHRK
Sbjct: 194 RKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYKSGRLVPEYRPANSPTFTAELHSNSHRK 253
Query: 364 VLEMRRKKET 373
++EMR++ ++
Sbjct: 254 IVEMRKQYQS 263
>AT2G45050.1 | chr2:18582958-18583845 FORWARD LENGTH=265
Length = 264
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 62/71 (87%)
Query: 302 GDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSLHSNSH 361
G RRC+HC +KTPQWR GP G KTLCNACGVR+KSGRL+PEYRPA SPTFV + HSNSH
Sbjct: 177 GMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFVLTQHSNSH 236
Query: 362 RKVLEMRRKKE 372
RKV+E+RR+KE
Sbjct: 237 RKVMELRRQKE 247
>AT1G08010.1 | chr1:2486202-2487402 REVERSE LENGTH=304
Length = 303
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 60/69 (86%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSLHSNSHRK 363
R+C+HC KTPQWR GP G KTLCNACGVR++SGRL+PEYRPA SPTF+ ++HSNSHRK
Sbjct: 220 RKCTHCETTKTPQWREGPSGPKTLCNACGVRFRSGRLVPEYRPASSPTFIPAVHSNSHRK 279
Query: 364 VLEMRRKKE 372
++EMRRK +
Sbjct: 280 IIEMRRKDD 288
>AT3G54810.2 | chr3:20296957-20298236 FORWARD LENGTH=323
Length = 322
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 52/68 (76%), Positives = 56/68 (82%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSLHSNSHRK 363
R+C HC V KTPQWR GP G KTLCNACGVRYKSGRL PEYRPA SPTF +LHSNSH+K
Sbjct: 229 RKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFTPALHSNSHKK 288
Query: 364 VLEMRRKK 371
V EMR K+
Sbjct: 289 VAEMRNKR 296
>AT4G34680.1 | chr4:16553700-16554610 FORWARD LENGTH=270
Length = 269
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 57/69 (82%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSLHSNSHRK 363
RRCSHCG TPQWR GP G KTLCNACGVR+KSGRL PEYRPA SPTF + +HSN HRK
Sbjct: 180 RRCSHCGTNNTPQWRTGPVGPKTLCNACGVRFKSGRLCPEYRPADSPTFSNEIHSNLHRK 239
Query: 364 VLEMRRKKE 372
VLE+R+ KE
Sbjct: 240 VLELRKSKE 248
>AT1G08000.1 | chr1:2483460-2484564 REVERSE LENGTH=309
Length = 308
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 58/69 (84%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSLHSNSHRK 363
R C+HC TPQWR GP G KTLCNACGVR+KSGRL+PEYRPA SPTF+ S+HSNSHRK
Sbjct: 218 RICTHCETITTPQWRQGPSGPKTLCNACGVRFKSGRLVPEYRPASSPTFIPSVHSNSHRK 277
Query: 364 VLEMRRKKE 372
++EMR+K +
Sbjct: 278 IIEMRKKDD 286
>AT3G45170.1 | chr3:16537538-16538232 FORWARD LENGTH=205
Length = 204
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 60/71 (84%)
Query: 303 DRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSLHSNSHR 362
D+ CSHCG +KTP WR GP GA TLCNACG+RY++GRLLPEYRPA SP F ++HSN HR
Sbjct: 114 DKSCSHCGTRKTPLWREGPRGAGTLCNACGMRYRTGRLLPEYRPASSPDFKPNVHSNFHR 173
Query: 363 KVLEMRRKKET 373
KV+E+RR++++
Sbjct: 174 KVMEIRRERKS 184
>AT2G28340.1 | chr2:12103672-12106172 FORWARD LENGTH=292
Length = 291
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 52/65 (80%)
Query: 306 CSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSLHSNSHRKVL 365
C+HC TPQWR GP G KTLCNACG+R++SGRL+ EYRPA SPTF+ ++HSN H+K++
Sbjct: 193 CTHCETTTTPQWREGPNGRKTLCNACGIRFRSGRLVLEYRPAASPTFIPTVHSNLHKKII 252
Query: 366 EMRRK 370
MR K
Sbjct: 253 YMRMK 257
>AT4G36620.1 | chr4:17268906-17269662 REVERSE LENGTH=212
Length = 211
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYK 336
RRC++C TP WR GP G K+LCNACG+R+K
Sbjct: 75 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK 107
>AT2G18380.1 | chr2:7982868-7984017 REVERSE LENGTH=209
Length = 208
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYK 336
RRC+ C TP WR GP+G K+LCNACG+R+K
Sbjct: 92 RRCASCDTTSTPLWRNGPKGPKSLCNACGIRFK 124
>AT4G26150.1 | chr4:13253210-13254659 FORWARD LENGTH=353
Length = 352
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 23/31 (74%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVR 334
R CS C KTP WR+GP G K+LCNACG+R
Sbjct: 199 RICSDCNTTKTPLWRSGPRGPKSLCNACGIR 229
>AT3G50870.1 | chr3:18911112-18912369 FORWARD LENGTH=296
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYK 336
RRC++C TP WR GP G K+LCNACG+R+K
Sbjct: 152 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK 184
>AT5G56860.1 | chr5:22989630-22991351 REVERSE LENGTH=399
Length = 398
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 23/31 (74%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVR 334
R CS C KTP WR+GP G K+LCNACG+R
Sbjct: 230 RVCSDCNTTKTPLWRSGPRGPKSLCNACGIR 260
>AT3G06740.1 | chr3:2126658-2127265 FORWARD LENGTH=150
Length = 149
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGR 339
+ C+ CG KTP WR GP G K+LCNACG+R + R
Sbjct: 41 KSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKR 76
>AT5G49300.1 | chr5:19984849-19985475 REVERSE LENGTH=140
Length = 139
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGR 339
+ C+ CG KTP WR GP G K+LCNACG+R + R
Sbjct: 36 KTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKR 71
>AT5G26930.1 | chr5:9479592-9480061 FORWARD LENGTH=121
Length = 120
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGR 339
R CS C KTP WR GP G K+LCNACG+R++ R
Sbjct: 26 RCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQR 61
>AT5G47140.1 | chr5:19145108-19147303 FORWARD LENGTH=471
Length = 470
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 24/41 (58%)
Query: 306 CSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRP 346
C HCGV TP WR GP LCNACG R+++ L Y P
Sbjct: 7 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGSLVNYTP 47
>AT4G16141.1 | chr4:9131872-9132893 REVERSE LENGTH=198
Length = 197
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGR 339
+ C CG +TP WR GP G K+LCNACG++ + R
Sbjct: 37 KTCVDCGTSRTPLWRGGPAGPKSLCNACGIKSRKKR 72
>AT3G16870.1 | chr3:5763752-5764576 REVERSE LENGTH=191
Length = 190
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGR 339
R C CG +TP WR GP G K+LCNACG++ + R
Sbjct: 42 RTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKR 77
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,480,948
Number of extensions: 110133
Number of successful extensions: 233
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 233
Number of HSP's successfully gapped: 25
Length of query: 387
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 287
Effective length of database: 8,364,969
Effective search space: 2400746103
Effective search space used: 2400746103
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)