BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0644000 Os02g0644000|AK070079
(446 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G62710.1 | chr1:23224070-23226857 REVERSE LENGTH=487 608 e-174
AT4G32940.1 | chr4:15900557-15903161 REVERSE LENGTH=495 531 e-151
AT2G25940.1 | chr2:11063496-11066020 REVERSE LENGTH=479 521 e-148
AT3G20210.1 | chr3:7052482-7054525 FORWARD LENGTH=467 385 e-107
AT1G08750.1 | chr1:2801283-2804392 FORWARD LENGTH=389 74 2e-13
>AT1G62710.1 | chr1:23224070-23226857 REVERSE LENGTH=487
Length = 486
Score = 608 bits (1568), Expect = e-174, Method: Compositional matrix adjust.
Identities = 289/422 (68%), Positives = 341/422 (80%), Gaps = 9/422 (2%)
Query: 30 ADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNHPQGEDVYAGVPKDYTGD 89
ADVCHAYQILRKGGLKEENIVV MYDDIAN+ LNPRPG ++NHP G+DVYAGVPKDYTG
Sbjct: 69 ADVCHAYQILRKGGLKEENIVVLMYDDIANHPLNPRPGTLINHPDGDDVYAGVPKDYTGS 128
Query: 90 EVTAKNFYAVLLGNKTAVTGGSRKVIDSKPNDHIFIFYSDHGGPGVLGMPNLPYLYAADF 149
VTA NFYAVLLG++ AV GGS KVI SKPNDHIF++Y+DHGGPGVLGMPN P++YAADF
Sbjct: 129 SVTAANFYAVLLGDQKAVKGGSGKVIASKPNDHIFVYYADHGGPGVLGMPNTPHIYAADF 188
Query: 150 MKVLQEKHASNTYAKMVIYVEACESGSIFEGLMPEDLNIYVTTASNAEESSWGTYCPGME 209
++ L++KHAS TY +MVIYVEACESGSIFEG+MP+DLNIYVTTASNA+ESS+GTYCPGM
Sbjct: 189 IETLKKKHASGTYKEMVIYVEACESGSIFEGIMPKDLNIYVTTASNAQESSYGTYCPGMN 248
Query: 210 PSPPSEYITCLGDLYSVSWMEDSETHNLKEESIKKQYEVVKKRTSDMNSYGAGSHVMEYG 269
PSPPSEYITCLGDLYSV+WMEDSETHNLK+E+IK+QY VK RTS+ N+Y GSHVMEYG
Sbjct: 249 PSPPSEYITCLGDLYSVAWMEDSETHNLKKETIKQQYHTVKMRTSNYNTYSGGSHVMEYG 308
Query: 270 DRTFKDDKLYLYQGFDPANAEVK-NKLSWEGPKAAVNQRDADLLFLWRRYELLHDKSEEK 328
+ + K +KLYLYQGFDPA + N+L + VNQRDADLLFLW Y D S +K
Sbjct: 309 NNSIKSEKLYLYQGFDPATVNLPLNELPVKSKIGVVNQRDADLLFLWHMYRTSEDGSRKK 368
Query: 329 LKALREISDTVMHRKLLDSSVDLVGKLLFGFGNGPS--VLQAVRPSGQPLVDDWDCLKRM 386
L+E+++T HRK LD+SV+L+ +LF GP+ VL VR G PLVDDW+CLK M
Sbjct: 369 DDTLKELTETTRHRKHLDASVELIATILF----GPTMNVLNLVREPGLPLVDDWECLKSM 424
Query: 387 VRIFESHCGPLTQYGMKHMRAFANICNNGISGASMKEASIATCSSHNSGRWS--SLVQGY 444
VR+FE HCG LTQYGMKHMRAFAN+CNNG+S M+EAS A C ++ R++ + GY
Sbjct: 425 VRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAACGGYSEARYTVHPSILGY 484
Query: 445 SA 446
SA
Sbjct: 485 SA 486
>AT4G32940.1 | chr4:15900557-15903161 REVERSE LENGTH=495
Length = 494
Score = 531 bits (1369), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/419 (63%), Positives = 316/419 (75%), Gaps = 3/419 (0%)
Query: 30 ADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNHPQGEDVYAGVPKDYTGD 89
AD+CHAYQ+LRKGGLKEENIVVFMYDDIANN NPRPG I+N P G+DVY GVPKDYTGD
Sbjct: 77 ADICHAYQLLRKGGLKEENIVVFMYDDIANNYENPRPGTIINSPHGKDVYQGVPKDYTGD 136
Query: 90 EVTAKNFYAVLLGNKTAVTGGSRKVIDSKPNDHIFIFYSDHGGPGVLGMPNLPYLYAADF 149
+V N +AV+LG+KTAV GGS KV+DS PNDHIFIFYSDHGGPGVLGMP PYLYA D
Sbjct: 137 DVNVDNLFAVILGDKTAVKGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSPYLYANDL 196
Query: 150 MKVLQEKHASNTYAKMVIYVEACESGSIFEGLMPEDLNIYVTTASNAEESSWGTYCPGME 209
VL++KHA TY +V Y+EACESGSIFEGL+PE LNIY TTASNAEESSWGTYCPG E
Sbjct: 197 NDVLKKKHALGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEE 256
Query: 210 PSPPSEYITCLGDLYSVSWMEDSETHNLKEESIKKQYEVVKKRTSDMNSYGAGSHVMEYG 269
PSPP EY TCLGDLYSV+WMEDS HNL+ E++ +QYE+VK+RT+ + Y GSHVM+YG
Sbjct: 257 PSPPPEYETCLGDLYSVAWMEDSGMHNLQTETLHQQYELVKRRTAPV-GYSYGSHVMQYG 315
Query: 270 DRTFKDDKLYLYQGFDPANAEVK--NKLSWEGPKAAVNQRDADLLFLWRRYELLHDKSEE 327
D D L LY G +PAN + S + P NQRDADL+ W +Y + S
Sbjct: 316 DVGISKDNLDLYMGTNPANDNFTFADANSLKPPSRVTNQRDADLVHFWEKYRKAPEGSAR 375
Query: 328 KLKALREISDTVMHRKLLDSSVDLVGKLLFGFGNGPSVLQAVRPSGQPLVDDWDCLKRMV 387
K +A +++ + + HR +D+SV LVGK+LFG GP VL VR +GQPLVDDW+CLK V
Sbjct: 376 KTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQV 435
Query: 388 RIFESHCGPLTQYGMKHMRAFANICNNGISGASMKEASIATCSSHNSGRWSSLVQGYSA 446
R FE HCG L+QYG+KHMR+FANICN GI M+EA+ C++ +G WSSL +G+SA
Sbjct: 436 RAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494
>AT2G25940.1 | chr2:11063496-11066020 REVERSE LENGTH=479
Length = 478
Score = 521 bits (1341), Expect = e-148, Method: Compositional matrix adjust.
Identities = 258/420 (61%), Positives = 316/420 (75%), Gaps = 6/420 (1%)
Query: 30 ADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNHPQGEDVYAGVPKDYTGD 89
ADVCHAYQ+L+KGG+KEENIVVFMYDDIA N NPRPGVI+N P GEDVY GVPKDYTGD
Sbjct: 62 ADVCHAYQLLKKGGVKEENIVVFMYDDIAKNEENPRPGVIINSPNGEDVYNGVPKDYTGD 121
Query: 90 EVTAKNFYAVLLGNKTAVTGGSRKVIDSKPNDHIFIFYSDHGGPGVLGMPNLPYLYAADF 149
EV N AV+LGNKTA+ GGS KV+DS PNDHIFI+YSDHGGPGVLGMP P LYA D
Sbjct: 122 EVNVDNLLAVILGNKTALKGGSGKVVDSGPNDHIFIYYSDHGGPGVLGMPTSPNLYANDL 181
Query: 150 MKVLQEKHASNTYAKMVIYVEACESGSIFEGLMPEDLNIYVTTASNAEESSWGTYCPGME 209
VL++K+AS TY +V Y+EACESGSIFEGL+PE LNIY TTASNAEESSWGTYCPG +
Sbjct: 182 NDVLKKKYASGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGED 241
Query: 210 PSPPSEYITCLGDLYSVSWMEDSETHNLKEESIKKQYEVVKKRTSDM-NSYGAGSHVMEY 268
PSPPSEY TCLGDLYSV+W+EDSE HNL+ E++ +QYE+VKKRT+ SY GSHVME+
Sbjct: 242 PSPPSEYETCLGDLYSVAWIEDSEKHNLQTETLHEQYELVKKRTAGSGKSY--GSHVMEF 299
Query: 269 GDRTFKDDKLYLYQGFDPA--NAEVKNKLSWEGPKAAVNQRDADLLFLWRRYELLHDKSE 326
GD +KL L+ G +PA N N+ S P NQRDADL+ W +Y+ + S
Sbjct: 300 GDIGLSKEKLVLFMGTNPADENFTFVNENSIRPPSRVTNQRDADLVHFWHKYQKAPEGSA 359
Query: 327 EKLKALREISDTVMHRKLLDSSVDLVGKLLFGFGNGPSVLQAVRPSGQPLVDDWDCLKRM 386
K++A +++ + + HR +D+S+ L+ +L G +VL VRPSG+PLVDDWDCLK +
Sbjct: 360 RKVEAQKQVLEAMSHRLHVDNSILLI-GILLFGLEGHAVLNKVRPSGEPLVDDWDCLKSL 418
Query: 387 VRIFESHCGPLTQYGMKHMRAFANICNNGISGASMKEASIATCSSHNSGRWSSLVQGYSA 446
VR FE HCG L+QYG+KHMR+ AN+CN GI M+EA++ C + + WSSL +G+SA
Sbjct: 419 VRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478
>AT3G20210.1 | chr3:7052482-7054525 FORWARD LENGTH=467
Length = 466
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/404 (49%), Positives = 266/404 (65%), Gaps = 5/404 (1%)
Query: 30 ADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNHPQGEDVYAGVPKDYTGD 89
AD+CHAYQILRKGGLK+ENI+VFMYDDIA + NPRPGVI+N P GEDVY GVPKDYT +
Sbjct: 64 ADICHAYQILRKGGLKDENIIVFMYDDIAFSSENPRPGVIINKPDGEDVYKGVPKDYTKE 123
Query: 90 EVTAKNFYAVLLGNKTAVTGGSRKVIDSKPNDHIFIFYSDHGGPGVLGMPNLPYLYAADF 149
V +NFY VLLGN++ VTGG+ KV+ S PND+IFI+Y+DHG PG++ MP + A DF
Sbjct: 124 AVNVQNFYNVLLGNESGVTGGNGKVVKSGPNDNIFIYYADHGAPGLIAMPTGDEVMAKDF 183
Query: 150 MKVLQEKHASNTYAKMVIYVEACESGSIFEGLMPEDLNIYVTTASNAEESSWGTYCPGME 209
+VL++ H Y KMVIYVEACESGS+FEG++ ++LNIY TA+N++ESSWG YCP
Sbjct: 184 NEVLEKMHKRKKYNKMVIYVEACESGSMFEGILKKNLNIYAVTAANSKESSWGVYCPESY 243
Query: 210 PSPPSEYITCLGDLYSVSWMEDSETHNLKEESIKKQYEVVKKRTSDMNSYGAGSHVMEYG 269
P PPSE TCLGD +S+SW+EDS+ H++ +E++++QY VVK+R + SHV +G
Sbjct: 244 PPPPSEIGTCLGDTFSISWLEDSDLHDMSKETLEQQYHVVKRRVG--SDVPETSHVCRFG 301
Query: 270 DRTFKDDKLYLYQGFDPANAEVKNKLSWEGP---KAAVNQRDADLLFLWRRYELLHDKSE 326
D L Y G +P N S+ P VN RD LL+L R+ + S
Sbjct: 302 TEKMLKDYLSSYIGRNPENDNFTFTESFSSPISNSGLVNPRDIPLLYLQRKIQKAPMGSL 361
Query: 327 EKLKALREISDTVMHRKLLDSSVDLVGKLLFGFGNGPSVLQAVRPSGQPLVDDWDCLKRM 386
E +A +++ D HRK +D S+ + +L N ++L + R +GQPLVDDWDC K +
Sbjct: 362 ESKEAQKKLLDEKNHRKQIDQSITDILRLSVKQTNVLNLLTSTRTTGQPLVDDWDCFKTL 421
Query: 387 VRIFESHCGPLTQYGMKHMRAFANICNNGISGASMKEASIATCS 430
V F++HCG YG+K+ A ANICN G+ A CS
Sbjct: 422 VNSFKNHCGATVHYGLKYTGALANICNMGVDVKQTVSAIEQACS 465
>AT1G08750.1 | chr1:2801283-2804392 FORWARD LENGTH=389
Length = 388
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 23 LCRTPIW------ADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNHPQGE 76
+C + W A+ Y+ +++ G+ +E I++ + DD+A N N P + N+ +
Sbjct: 32 VCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNEYPAQVFNNENHK 91
Query: 77 -DVYA-GVPKDYTGDEVTAKNFYAVLLGNKTAVTGGSRKVIDSKPNDHIFIFYSDHGGPG 134
++Y V DY G EVT +NF VL G S++++ S HI ++ + HGG
Sbjct: 92 LNLYGDNVEVDYRGYEVTVENFLRVLTGRHENAVPRSKRLL-SDEGSHILLYMTGHGGDE 150
Query: 135 VLGMPNLPYLYAADFMKVLQEKHASNTYAKMVIYVEACESGSIFEGL 181
L + L + D +++ + +++I V+ C++ ++F L
Sbjct: 151 FLKFQDAEELQSHDLADAVKQMKEKRRFKELMIMVDTCQAATLFNQL 197
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,678,957
Number of extensions: 491689
Number of successful extensions: 1266
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1255
Number of HSP's successfully gapped: 5
Length of query: 446
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 344
Effective length of database: 8,310,137
Effective search space: 2858687128
Effective search space used: 2858687128
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)