BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0640000 Os02g0640000|AK120841
(143 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G63220.1 | chr1:23449017-23450244 FORWARD LENGTH=148 191 1e-49
AT3G55470.1 | chr3:20564356-20566092 FORWARD LENGTH=157 99 6e-22
AT4G00467.1 | chr4:214846-216076 REVERSE LENGTH=203 87 3e-18
AT4G34150.1 | chr4:16355035-16356955 FORWARD LENGTH=248 67 3e-12
AT1G03370.1 | chr1:830968-834996 FORWARD LENGTH=1021 60 5e-10
AT5G11100.1 | chr5:3532402-3535221 FORWARD LENGTH=570 58 2e-09
AT1G05500.1 | chr1:1625098-1628940 FORWARD LENGTH=561 56 7e-09
AT5G47710.1 | chr5:19330470-19331178 FORWARD LENGTH=167 52 8e-08
AT1G48590.2 | chr1:17962886-17964274 FORWARD LENGTH=201 50 3e-07
AT4G21160.1 | chr4:11284694-11286532 FORWARD LENGTH=338 50 4e-07
AT5G04220.2 | chr5:1155985-1158620 REVERSE LENGTH=541 50 4e-07
AT3G07940.1 | chr3:2529542-2531368 FORWARD LENGTH=386 49 7e-07
AT3G17980.1 | chr3:6152417-6153115 FORWARD LENGTH=178 49 1e-06
AT1G73580.1 | chr1:27654841-27655518 FORWARD LENGTH=169 49 1e-06
AT4G05330.1 | chr4:2720772-2722679 REVERSE LENGTH=337 48 2e-06
AT3G61050.1 | chr3:22597485-22600932 FORWARD LENGTH=511 47 3e-06
AT3G59660.1 | chr3:22034426-22038484 REVERSE LENGTH=595 46 7e-06
>AT1G63220.1 | chr1:23449017-23450244 FORWARD LENGTH=148
Length = 147
Score = 191 bits (484), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 109/144 (75%), Gaps = 1/144 (0%)
Query: 1 MVHGTLEVLLVGAKGLENTDYLCNMDPYAILKCRSQEQRSSIASGKGSNPEWNENFVFTV 60
M HGTLEV+LV AKGLE+ D+L NMDPY L CR+Q+Q+S++A G G+ PEWNE F+FTV
Sbjct: 1 MPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTV 60
Query: 61 SDKATELLIKLLDSDTGSADDFVGEATIPLEAVYTEGSIPPTLYNVVKDEHYCGEIKVGL 120
S+ TEL K+ D D G+ DD VGEATIPLE V+ EGSIPPT YNVVKDE Y GEI V L
Sbjct: 61 SEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVAL 120
Query: 121 TFTPEDVRQRGLPED-FGGWKQSR 143
+F P + R RG+ E+ +GGWK S
Sbjct: 121 SFKPSENRSRGMDEESYGGWKNSE 144
>AT3G55470.1 | chr3:20564356-20566092 FORWARD LENGTH=157
Length = 156
Score = 99.4 bits (246), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 93/156 (59%), Gaps = 15/156 (9%)
Query: 1 MVHGTLEVLLVGAKGLENTDYLCNMDPYAILKCRSQEQRSSIAS-GKGSNPEWNENFV-- 57
M G LEV L+ KGL+ +D+L +DPY ++ + Q ++SS+A G NP WN+
Sbjct: 1 MAVGILEVSLISGKGLKRSDFLGKIDPYVEIQYKGQTRKSSVAKEDGGRNPTWNDKLKWR 60
Query: 58 --FTVSDKATELLIKLLDSDTGSADDFVGEATIPLEAVYTEG------SIPPTLYNVV-K 108
F S +L++K++D DT S+DDF+GEAT+ ++ + G + PT YN+V
Sbjct: 61 AEFPGSGADYKLIVKVMDHDTFSSDDFIGEATVHVKELLEMGVEKGTAELRPTKYNIVDS 120
Query: 109 DEHYCGEIKVGLTFTPEDVRQRGLP-EDFGGWKQSR 143
D + GE+ +G++++ ++ RG+ E FGGWK S+
Sbjct: 121 DLSFVGELLIGVSYSL--LQDRGMDGEQFGGWKHSQ 154
>AT4G00467.1 | chr4:214846-216076 REVERSE LENGTH=203
Length = 202
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 1 MVHGTLEVLLVGAKGLENTDYLCNMDPYAILKCRSQEQRSSIASGKGSNPEWNENFVFTV 60
M G LEV L+ A G+ +T+++ Y +L+C ++E RS ++ G N WN+ FVF
Sbjct: 1 MKRGILEVFLIDAHGITHTNFIGTPVYYVLLQCGTKEYRSKMSKGDNDNALWNQKFVFDF 60
Query: 61 S----DKATELLIKLLDSDTGSADDFVGEATIPLEAVYTEGS------IPPTLYNVV-KD 109
K T + +++LD + + FVGE I L + TEG I P YNVV +D
Sbjct: 61 PMSQWKKLTYIKLRILDKELFNDGGFVGETIIHLGGIITEGRDRGYIEIKPAPYNVVLED 120
Query: 110 EHYCGEIKVGLTFTPEDVRQR 130
+ + GE+KVGL F D QR
Sbjct: 121 DTFKGELKVGLRFIATDKLQR 141
>AT4G34150.1 | chr4:16355035-16356955 FORWARD LENGTH=248
Length = 247
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 65/117 (55%)
Query: 6 LEVLLVGAKGLENTDYLCNMDPYAILKCRSQEQRSSIASGKGSNPEWNENFVFTVSDKAT 65
LEV +VG + L++T++ DPY +L+ + R+ + G N + E F+FT+ +
Sbjct: 12 LEVTVVGCQKLKDTEWFSRQDPYVVLEYGGRSHRTRTCTDGGKNAVFQEKFIFTLIEGLR 71
Query: 66 ELLIKLLDSDTGSADDFVGEATIPLEAVYTEGSIPPTLYNVVKDEHYCGEIKVGLTF 122
+L + + +S+T S DDF+G ATI L+ V ++ T K + GE+++ L +
Sbjct: 72 DLKVAVWNSNTLSTDDFIGNATIQLQKVLSQEYDDCTWTLQSKTGRFAGEVQLLLHY 128
>AT1G03370.1 | chr1:830968-834996 FORWARD LENGTH=1021
Length = 1020
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 13/130 (10%)
Query: 6 LEVLLVGAKGLENTDYLCNMDPYAILKCRSQEQRSSIASGKGSNPEWNENFVFTVSDKAT 65
L+V +V A+ L D DPY L+ Q R+ + K NP+W E+F F V D
Sbjct: 3 LQVRVVEARNLPAMDLNGFSDPYVRLQLGKQRSRTKVVK-KNLNPKWTEDFSFGVDDLND 61
Query: 66 ELLIKLLDSDTGSADDFVGEATIPLEAVYTEGS---------IPPTLYNVVKDEHYCGEI 116
EL++ +LD D DDFVG+ + + V+ + + P KD CGEI
Sbjct: 62 ELVVSVLDEDKYFNDDFVGQVRVSVSLVFDAENQSLGTVWYPLNPKKKGSKKD---CGEI 118
Query: 117 KVGLTFTPED 126
+ + F+ ++
Sbjct: 119 LLKICFSQKN 128
>AT5G11100.1 | chr5:3532402-3535221 FORWARD LENGTH=570
Length = 569
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 4 GTLEVLLVGAKGLENTDYLCNMDPYAILKCRSQEQRSSIAS--GKGSNPEWNENFVFTVS 61
G L+V +V AK L N D + DPYAI+ R R+ NP WNE+F F V
Sbjct: 264 GKLDVKVVQAKDLANKDMIGKSDPYAIVFIRPLPDRTKKTKTISNSLNPIWNEHFEFIVE 323
Query: 62 DKATE-LLIKLLDSDTGSADDFVGEATIPLEAVYTEGSIPPTLYNVVKDEHYC------G 114
D +T+ L +++ D + + +G A +PL + G + +VKD G
Sbjct: 324 DVSTQHLTVRVFDDEGVGSSQLIGAAQVPLNEL-VPGKVKDIWLKLVKDLEIQRDTKNRG 382
Query: 115 EIKVGLTFTP 124
++++ L + P
Sbjct: 383 QVQLELLYCP 392
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 1 MVHGTLEVLLVGAKGLENTDYLCNMDPYAILKCRSQEQRSSIASGKGS-NPEWNENFVFT 59
+V G L V +V A+ L D++ D + ++ + E +S S NP WN+ F F
Sbjct: 440 IVRGVLSVTVVAAEDLPAVDFMGKADAFVVITLKKSETKSKTRVVPDSLNPVWNQTFDFV 499
Query: 60 VSDKATELL-IKLLDSDTGSADDFVGEATIPLEAVYTEG 97
V D +LL +++ D D D +G + L V EG
Sbjct: 500 VEDALHDLLTLEVWDHDKFGKDK-IGRVIMTLTRVMLEG 537
>AT1G05500.1 | chr1:1625098-1628940 FORWARD LENGTH=561
Length = 560
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 4 GTLEVLLVGAKGLENTDYLCNMDPYAILKCR--SQEQRSSIASGKGSNPEWNENFVFTVS 61
G LEV LV AK L N D + DP+A + R ++ + S NP WNE+F F V
Sbjct: 262 GMLEVKLVQAKNLTNKDLVGKSDPFAKMFIRPLREKTKRSKTINNDLNPIWNEHFEFVVE 321
Query: 62 DKATE-LLIKLLDSDTGSADDFVGEATIPLEAVYTEGSIPPTLYNVVKDEHYC------G 114
D +T+ L++++ D + A + +G A I L G + +VKD G
Sbjct: 322 DASTQHLVVRIYDDEGVQASELIGCAQIRL-CELEPGKVKDVWLKLVKDLEIQRDTKNRG 380
Query: 115 EIKVGLTFTP 124
E+ + L + P
Sbjct: 381 EVHLELLYIP 390
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 1 MVHGTLEVLLVGAKGLENTDYLCNMDPYAILKCRSQEQRSSIASGKGS-NPEWNENFVFT 59
+V G L V ++ A+ + D + DPY +L + +S S NP WN+ F F
Sbjct: 432 IVRGVLSVTVISAEEIPIQDLMGKADPYVVLSMKKSGAKSKTRVVNDSLNPVWNQTFDFV 491
Query: 60 VSDKATELLI-KLLDSDTGSADDFVGEATIPLEAVYTE 96
V D ++L+ ++ D DT D++G + L V E
Sbjct: 492 VEDGLHDMLVLEVWDHDT-FGKDYIGRCILTLTRVIME 528
>AT5G47710.1 | chr5:19330470-19331178 FORWARD LENGTH=167
Length = 166
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 4 GTLEVLLVGAKGLENTDYLCNMDPYAILKCRSQEQRSSIASGKGSNPEWNENFVFTVSDK 63
G L+V ++ K L D+ + DPY I+K ++ ++ + + NP WNE FT+ D
Sbjct: 6 GLLQVTVIQGKKLVIRDFKSS-DPYVIVKLGNESAKTKVINN-CLNPVWNEELNFTLKDP 63
Query: 64 ATELLIKLLDSDTGSADDFVGEATIPLEAVYT 95
A L +++ D D ADD +G A++ L+ + +
Sbjct: 64 AAVLALEVFDKDRFKADDKMGHASLSLQPLIS 95
>AT1G48590.2 | chr1:17962886-17964274 FORWARD LENGTH=201
Length = 200
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 22 LCNMDPYAILKCRSQEQRSSIASGKGSNPEWNENFVFTVSDKATELLIKLLDSDTGSADD 81
L + DPY ++K Q+ ++ + K NPEWNE+ +VSD +L+ + D DT + DD
Sbjct: 59 LNSSDPYVVVKMAKQKLKTRVIY-KNVNPEWNEDLTLSVSDPNLTVLLTVYDYDTFTKDD 117
Query: 82 FVGEA 86
+G+A
Sbjct: 118 KMGDA 122
>AT4G21160.1 | chr4:11284694-11286532 FORWARD LENGTH=338
Length = 337
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 4 GTLEVLLVGAKGLENTDYLCNMDPYAILKCRSQEQRSSIASGKGSNPEWNENFVFTVSDK 63
G L+V + + D + + DPY +L Q+ +S++ NP WNE + +V
Sbjct: 181 GLLKVTIKKGTNMAIRDMMSS-DPYVVLTLGQQKAQSTVVKSN-LNPVWNEELMLSVPHN 238
Query: 64 ATELLIKLLDSDTGSADDFVGEATIPLEAVYTEG 97
+ +++ D DT SADD +GEA I ++ + T
Sbjct: 239 YGSVKLQVFDYDTFSADDIMGEAEIDIQPLITSA 272
>AT5G04220.2 | chr5:1155985-1158620 REVERSE LENGTH=541
Length = 540
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GTLEVLLVGAKGLENTDYLCNMDPYAILKCRSQE--QRSSIASGKGSNPEWNENFVFTVS 61
G L V ++ A+ L D L DPY L ++ + + + NPEWNE+F V
Sbjct: 261 GLLHVSILRARNLLKKDLLGTSDPYVKLSLTGEKLPAKKTTIKKRNLNPEWNEHFKLIVK 320
Query: 62 DKATELL-IKLLDSDTGSADDFVGEATIPLEAV 93
D +++L +++ D D D +G IPL+ +
Sbjct: 321 DPNSQVLQLEVFDWDKVGGHDRLGMQMIPLQKI 353
>AT3G07940.1 | chr3:2529542-2531368 FORWARD LENGTH=386
Length = 385
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 4 GTLEVLLVGAKGLENTDYLCNMDPYAILKCRSQEQRSSIASGKGSNPEWNENFVFTVSDK 63
G ++V +V L D + + DPY IL Q ++ + NP WNE + ++ +
Sbjct: 229 GLIKVNVVKGTNLAVRDVMTS-DPYVILALGQQSVKTRVIKN-NLNPVWNETLMLSIPEP 286
Query: 64 ATELLIKLLDSDTGSADDFVGEATIPLEAVYT 95
L + + D DT S DDF+GEA I ++ + +
Sbjct: 287 MPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVS 318
>AT3G17980.1 | chr3:6152417-6153115 FORWARD LENGTH=178
Length = 177
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 26 DPYAILKCRSQEQRSSIASGKGSNPEWNENFVFTVSDKATELLIKLLDSDTGSADDFVGE 85
DPY ++K Q+ ++ + + K NPEWNE+ +V+D +L+ + D D S DD +G+
Sbjct: 39 DPYVVVKMGKQKLKTRVIN-KDVNPEWNEDLTLSVTDSNLTVLLTVYDHDMFSKDDKMGD 97
Query: 86 A 86
A
Sbjct: 98 A 98
>AT1G73580.1 | chr1:27654841-27655518 FORWARD LENGTH=169
Length = 168
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 26 DPYAILKCRSQEQRSSIASGKGSNPEWNENFVFTVSDKATELLIKLLDSDTGSADDFVGE 85
DPY +LK Q+ ++ + + NP+W E+ FTV+D L + + D D S DD +G+
Sbjct: 30 DPYVVLKLGRQKLKTKVVK-QNVNPQWQEDLSFTVTDPNLPLTLIVYDHDFFSKDDKMGD 88
Query: 86 ATIPL----EAVYTE----------GSIPPTLYNVVKDEHYC 113
A I L EA+ E +I P+ N + +E Y
Sbjct: 89 AEIDLKPYIEALRMELSGLPDGTIISTIGPSRGNCLAEESYI 130
>AT4G05330.1 | chr4:2720772-2722679 REVERSE LENGTH=337
Length = 336
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 4 GTLEVLLVGAKGLENTDYLCNMDPYAILKCRSQEQRSSIASGKGSNPEWNENFVFTVSDK 63
G L+V + L D + + DPY +L Q+ ++++ + NP WN+ + +V +
Sbjct: 180 GLLKVTIKKGTNLAIRDMMSS-DPYVVLNLGKQKLQTTVMNS-NLNPVWNQELMLSVPES 237
Query: 64 ATELLIKLLDSDTGSADDFVGEATIPLEAVYTEG 97
+ +++ D DT SADD +GEA I ++ + T
Sbjct: 238 YGPVKLQVYDYDTFSADDIMGEADIDIQPLITSA 271
>AT3G61050.1 | chr3:22597485-22600932 FORWARD LENGTH=511
Length = 510
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 3 HGTLEVLLVGAKGLENTDYLCNMDPYAILKCRSQEQRSSIASGKGSNPEWNENFVFTVSD 62
G L V +V A L+N + + DPYA + R + + A NP W++ F D
Sbjct: 262 QGKLIVTVVKATNLKNKELIGKSDPYATIYIRPVFKYKTKAIENNLNPVWDQTFELIAED 321
Query: 63 KATE-LLIKLLDSDTGSADDFVGEATIPLEAV 93
K T+ L +++ D D G D+ +G +PL ++
Sbjct: 322 KETQSLTVEVFDKDVGQ-DERLGLVKLPLSSL 352
>AT3G59660.1 | chr3:22034426-22038484 REVERSE LENGTH=595
Length = 594
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 6 LEVLLVGAKGLENTDYLCNMDPYAILKCRSQEQRSSIASGKGSNPEWNENFVFTVSDKAT 65
++V L+ AK L + DPYAI+ C S+++ SS+ G NP W E F F +
Sbjct: 83 VKVELLAAKNLIGANLNGTSDPYAIVNCGSEKRFSSMVPG-SRNPMWGEEFNFPTDELPA 141
Query: 66 ELLIKLLDSDTGSADDFVGEATIPLEAVYTEGSIPPTLYNV 106
++ + + D D +G TI +E EG P +++
Sbjct: 142 KINVTIHDWDIIWKSTVLGSVTINVE---REGQTGPVWHSL 179
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.135 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,460,239
Number of extensions: 144686
Number of successful extensions: 359
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 383
Number of HSP's successfully gapped: 20
Length of query: 143
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 54
Effective length of database: 8,666,545
Effective search space: 467993430
Effective search space used: 467993430
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 106 (45.4 bits)