BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0634500 Os02g0634500|AK062167
(298 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G23140.1 | chr5:7783811-7784826 FORWARD LENGTH=242 258 3e-69
AT1G02560.1 | chr1:538000-539805 FORWARD LENGTH=299 168 3e-42
AT1G66670.1 | chr1:24863995-24865646 REVERSE LENGTH=310 145 2e-35
AT5G45390.1 | chr5:18396351-18397586 FORWARD LENGTH=293 139 1e-33
ATCG00670.1 | chrC:69910-71882 REVERSE LENGTH=197 129 2e-30
AT4G17040.1 | chr4:9586740-9589297 REVERSE LENGTH=306 126 1e-29
AT1G11750.2 | chr1:3967609-3969535 FORWARD LENGTH=290 118 3e-27
AT1G12410.1 | chr1:4223099-4224954 FORWARD LENGTH=280 116 1e-26
AT1G09130.3 | chr1:2939731-2942217 REVERSE LENGTH=371 110 1e-24
AT1G49970.1 | chr1:18501936-18504462 REVERSE LENGTH=388 85 4e-17
>AT5G23140.1 | chr5:7783811-7784826 FORWARD LENGTH=242
Length = 241
Score = 258 bits (659), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 152/203 (74%)
Query: 69 QAFGLVPMVIETTSRGERAYDIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLK 128
+++ L+PMVIE +SRGERAYDIFSRLLKERI+ I+GPI D+T+ +VVAQLL+LESENP K
Sbjct: 28 RSYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSK 87
Query: 129 PVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQXXXXXXXXXXXXXXXXXXXXPNA 188
P+H+Y+NSPGG VTAGLAIYDTMQYIR P++T+C+GQ PNA
Sbjct: 88 PIHMYLNSPGGHVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNA 147
Query: 189 RVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPE 248
VMIHQPSGG GQA DI I K+I+++ D LN++Y KHTGQ +D + M+RD FM PE
Sbjct: 148 TVMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPE 207
Query: 249 EARDWGLIDEVIENRPASLIPEG 271
EA+ +G+IDEVI+ RP L+ +
Sbjct: 208 EAKAFGIIDEVIDERPLELVKDA 230
>AT1G02560.1 | chr1:538000-539805 FORWARD LENGTH=299
Length = 298
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 119/188 (63%)
Query: 85 ERAYDIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPGGVVTAG 144
ER I S+L + RI+ G + D+ A+++VAQLL+L++ +P K + +Y+NSPGG VTAG
Sbjct: 110 ERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAG 169
Query: 145 LAIYDTMQYIRCPVTTLCIGQXXXXXXXXXXXXXXXXXXXXPNARVMIHQPSGGAQGQAT 204
+AI+DTM++IR V+T+C+G PN+R+MIHQP GGAQG T
Sbjct: 170 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 229
Query: 205 DIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLIDEVIENRP 264
DI IQA E+L + LN HTGQ ++KI Q +RD FM +EA+++GLID VI N
Sbjct: 230 DIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPL 289
Query: 265 ASLIPEGA 272
+L P A
Sbjct: 290 KALQPLAA 297
>AT1G66670.1 | chr1:24863995-24865646 REVERSE LENGTH=310
Length = 309
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 118/184 (64%), Gaps = 1/184 (0%)
Query: 89 DIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPGGVVTAGLAIY 148
D + LL++RIV + + D TA LV++QLL L++E+ + + L+INSPGG +TAG+ IY
Sbjct: 85 DTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIY 144
Query: 149 DTMQYIRCPVTTLCIGQXXXXXXXXXXXXXXXXXXXXPNARVMIHQPSGGAQGQATDIAI 208
D M+ + V+T+C+G PN++VMIHQP G A G+AT+++I
Sbjct: 145 DAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSI 204
Query: 209 QAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLIDEVIEN-RPASL 267
+ +E++ + +LNKI+ + TG+ +IE +RD F++P EA+++GLID VI++ +P +
Sbjct: 205 RIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLI 264
Query: 268 IPEG 271
P G
Sbjct: 265 APIG 268
>AT5G45390.1 | chr5:18396351-18397586 FORWARD LENGTH=293
Length = 292
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 114/191 (59%), Gaps = 3/191 (1%)
Query: 79 ETTSRGERAYDIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPG 138
E+ RG + D+ LL+ERIV + I D A +++QLL L++++P K + L+INSPG
Sbjct: 70 ESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG 128
Query: 139 GVVTAGLAIYDTMQYIRCPVTTLCIGQXXXXXXXXXXXXXXXXXXXXPNARVMIHQPSGG 198
G ++A +AIYD +Q +R V+T+ +G PN R+MIHQP GG
Sbjct: 129 GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGG 188
Query: 199 AQGQATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLIDE 258
A GQA D+ IQAKE++ ++ + I T + +++ + ++RD +M P EA ++GLID
Sbjct: 189 ASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDG 248
Query: 259 VIENRPASLIP 269
VI+ S+IP
Sbjct: 249 VIDGD--SIIP 257
>ATCG00670.1 | chrC:69910-71882 REVERSE LENGTH=197
Length = 196
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 105/172 (61%), Gaps = 1/172 (0%)
Query: 89 DIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPGGVVTAGLAIY 148
DI++RL +ER+ + + E ++ +++ +++L E K ++L+INSPGG V +G+AIY
Sbjct: 22 DIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIY 81
Query: 149 DTMQYIRCPVTTLCIGQXXXXXXXXXXXXXXXXXXXXPNARVMIHQP-SGGAQGQATDIA 207
DTMQ++R V T+C+G P+ARVMIHQP S + Q +
Sbjct: 82 DTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFI 141
Query: 208 IQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLIDEV 259
++A+E+LKLR+ + ++Y + TG+ I I + MERD+FM EA+ G++D V
Sbjct: 142 LEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMSATEAQAHGIVDLV 193
>AT4G17040.1 | chr4:9586740-9589297 REVERSE LENGTH=306
Length = 305
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 109/206 (52%), Gaps = 11/206 (5%)
Query: 72 GLVPMVI---ETTSRGERAYDIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLK 128
G+V MVI + ++ + D+ S L K RIV + + L++A+ L+L+ E+ K
Sbjct: 85 GVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEK 144
Query: 129 PVHLYINSPG--------GVVTAGLAIYDTMQYIRCPVTTLCIGQXXXXXXXXXXXXXXX 180
P++LYINS G G T AIYD M Y++ P+ TLC+G
Sbjct: 145 PIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKG 204
Query: 181 XXXXXPNARVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCME 240
P++ +MI QP QGQATD+ I KEI ++ + K+Y KH G+ ++IE M+
Sbjct: 205 NRSALPSSTIMIKQPIARFQGQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMK 264
Query: 241 RDLFMDPEEARDWGLIDEVIENRPAS 266
R + P EA ++G+ID+V+ N S
Sbjct: 265 RPKYFSPTEAVEYGIIDKVVYNERGS 290
>AT1G11750.2 | chr1:3967609-3969535 FORWARD LENGTH=290
Length = 289
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 93/173 (53%)
Query: 89 DIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPGGVVTAGLAIY 148
D+ S L + RI+ I PI + A V++QL+ L S + + +Y+N PGG + LAIY
Sbjct: 114 DLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAIY 173
Query: 149 DTMQYIRCPVTTLCIGQXXXXXXXXXXXXXXXXXXXXPNARVMIHQPSGGAQGQATDIAI 208
D M +I+ V T+ G PN RVMIHQP G G D+
Sbjct: 174 DCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRR 233
Query: 209 QAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLIDEVIE 261
Q E ++ R +++++Y TGQ ++K++Q ERD F+ EA ++GLID ++E
Sbjct: 234 QVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLE 286
>AT1G12410.1 | chr1:4223099-4224954 FORWARD LENGTH=280
Length = 279
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 103/172 (59%)
Query: 89 DIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPGGVVTAGLAIY 148
DI++ L +ER++ I I +E ++ ++A +L+L++ + + +++Y+N PGG +T LAIY
Sbjct: 89 DIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAIY 148
Query: 149 DTMQYIRCPVTTLCIGQXXXXXXXXXXXXXXXXXXXXPNARVMIHQPSGGAQGQATDIAI 208
DTM+ ++ PV T C+G P +R+ + P+G A+GQA DI
Sbjct: 149 DTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQN 208
Query: 209 QAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLIDEVI 260
+AKE+ ++RD L K+TGQ +++ + + R + EEA ++GLID+++
Sbjct: 209 EAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLIDKIV 260
>AT1G09130.3 | chr1:2939731-2942217 REVERSE LENGTH=371
Length = 370
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 100/183 (54%), Gaps = 11/183 (6%)
Query: 89 DIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPG---------G 139
D+ S LL RIV I P+ LVVA+L++L+ +P +P+++YINS G G
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180
Query: 140 VVTAGLAIYDTMQYIRCPVTTLCIGQXXXXXXXXXXXXXXXXXXXXPNARVMIHQPSGGA 199
+ + G AIYD++ ++ V T+C+G P+A+ MI QP +
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPS 240
Query: 200 QG--QATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLID 257
G A+D+ I+AKE++ RD L ++ KHTG ++ + M R +MD +A+++G+ID
Sbjct: 241 SGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVID 300
Query: 258 EVI 260
++
Sbjct: 301 RIL 303
>AT1G49970.1 | chr1:18501936-18504462 REVERSE LENGTH=388
Length = 387
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 10/189 (5%)
Query: 89 DIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPG---------G 139
D+ S LL RI + PI L+VAQ ++L+ +NP KP++LYINSPG G
Sbjct: 171 DLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVG 230
Query: 140 VVTAGLAIYDTMQYIRCPVTTLCIGQXXXXXXXXXXXXXXXXXXXXPNARVMIHQPS-GG 198
T AI DT+ Y + V T+ G P++ ++ P
Sbjct: 231 SETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNR 290
Query: 199 AQGQATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLIDE 258
+ G A D+ I+AKE+ + ++ K TG+ ++I + ++R ++ + A D+G+ D+
Sbjct: 291 SSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADK 350
Query: 259 VIENRPASL 267
+ +++ +S
Sbjct: 351 IADSQDSSF 359
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.138 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,441,239
Number of extensions: 165238
Number of successful extensions: 464
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 451
Number of HSP's successfully gapped: 10
Length of query: 298
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 200
Effective length of database: 8,419,801
Effective search space: 1683960200
Effective search space used: 1683960200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)