BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0631000 Os02g0631000|AK068667
         (389 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G31080.2  | chr4:15121186-15123072 FORWARD LENGTH=444          342   3e-94
AT2G24330.1  | chr2:10347340-10349566 REVERSE LENGTH=409          341   4e-94

>AT4G31080.2 | chr4:15121186-15123072 FORWARD LENGTH=444
          Length = 443

 Score =  342 bits (876), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 170/346 (49%), Positives = 224/346 (64%), Gaps = 40/346 (11%)

Query: 29  VLGRMWRALFGGR-EDYEKRLQYLSKEEAAVHARMRRRTQFSRTAVRNLIVLSVLAEVVA 87
              R+W  +F  R +D+EKRLQY+S+EEA V +RM+RR+   R   RNLIV SVL E++A
Sbjct: 41  FFSRLWNGIFRVRGDDFEKRLQYISREEATVLSRMKRRSISWRKLTRNLIVSSVLFEIIA 100

Query: 88  IVYAIMTTRNEHITWEMRAIRVLPMFVLPAVSSVIYSTVVKFTRMLERKDQKTLEKLRAE 147
           + YAI+TTR E + W MR+ R+LPMF+LPAVS++ YS++V F++M +R+DQKTLEKLRAE
Sbjct: 101 VGYAILTTRTEDLDWRMRSFRILPMFILPAVSALAYSSIVSFSKMFDRRDQKTLEKLRAE 160

Query: 148 RKAKIDELKERTNYYLTQQLIQ----------------------------------KYDL 173
           R AKI+ELKERTNYY TQQLIQ                                  +YD 
Sbjct: 161 RLAKINELKERTNYYTTQQLIQAWHSHATKERSMFADLKRLTTACRAGANRIVLMQRYDP 220

Query: 174 DPXXXXXXXXXXXXXXGEETGLKVHVGEEPKLDSAVARSNDVEISPSEGLRNRKQSNARG 233
           DP              G ++GLKV++G+E +LD +  +SND+E++ S GLRNR+Q N R 
Sbjct: 221 DPAAKAAAATVLASKLGADSGLKVYLGDESQLDPSSGKSNDMEVNQSRGLRNRRQPNTRP 280

Query: 234 SRTGGTTAAQNPAQGAESSLTS---SSGLEQPPMVVEHF--QGSGASDGGWIAKIAALLV 288
             +G T+   +  +   S  +     +  +   M+VEH+  QG  A DG WI++IAALLV
Sbjct: 281 HGSGSTSTHHSDDESHHSGTSERFPGTTEQNQQMLVEHYSPQGYAAHDGSWISRIAALLV 340

Query: 289 GEDPSQSYALICGNCHMHNGLARKEDYPHITYYCPHCHALNTSKQS 334
           GEDP+QSYALICGNC MHNGLARKED+ +ITYYCPHC+ALN  K S
Sbjct: 341 GEDPTQSYALICGNCRMHNGLARKEDFAYITYYCPHCNALNKPKHS 386



>AT2G24330.1 | chr2:10347340-10349566 REVERSE LENGTH=409
          Length = 408

 Score =  341 bits (875), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 177/333 (53%), Positives = 227/333 (68%), Gaps = 19/333 (5%)

Query: 29  VLGRMWRALFGGR-EDYEKRLQYLSKEEAAVHARMRRRTQFSRTAVRNLIVLSVLAEVVA 87
           +  R+W A+F  R +D+EKRL+ +SKEEA V  RM+RR+   R  +RNLI  SV  EV+A
Sbjct: 40  LFSRLWNAIFRVRGDDFEKRLKNISKEEATVRNRMKRRSITRRNFIRNLIAFSVFFEVIA 99

Query: 88  IVYAIMTTRNEHITWEMRAIRVLPMFVLPAVSSVIYSTVVKFTRMLERKDQKTLEKLRAE 147
           + YAIMTTR+E + W++R+ R+LPMF+LPAV+ ++YS++V F RM +R+DQ TLEKL+AE
Sbjct: 100 VSYAIMTTRDEDLDWKLRSFRILPMFLLPAVAFLLYSSLVGFWRMCDRRDQHTLEKLQAE 159

Query: 148 RKAKIDELKERTNYYLTQQLIQKYDLDPXXXXXXXXXXXXXXGEETGLKVHVGEEPKLDS 207
              KI+ELKERTNYY+TQQLIQ+YD DP              G E+GLKV VG+E +L+ 
Sbjct: 160 MLGKINELKERTNYYITQQLIQRYDPDPAAKAAAATVLASKLGAESGLKVFVGDESQLEP 219

Query: 208 AVARSNDVEISPSEGLRNRKQSNARGSRTGGTTAAQNPAQGAESSLTSS--SGLEQ-PPM 264
              ++N      S GLRNRKQ+N RG+ +  TT   +    +  S TS   +G EQ   M
Sbjct: 220 TAGKNN---AKHSGGLRNRKQTNTRGN-SAETTPIHHSDNESNHSGTSERITGTEQNQQM 275

Query: 265 VVEHF--QGSGASDGGWIAKIAALLVGEDPSQSYALICGNCHMHNGLARKEDYPHITYYC 322
           V EH+  Q   A DG WI++IAALLVGEDPSQSYALICGNC MHNGLARKED+P+ITYYC
Sbjct: 276 VFEHYNPQEYAAHDGSWISRIAALLVGEDPSQSYALICGNCRMHNGLARKEDFPYITYYC 335

Query: 323 PHCHALNTSKQSLGQHSGSNSGRSTPVAPADGI 355
           PHC ALN  K S  +HS         +APAD +
Sbjct: 336 PHCRALNKPKHS-EEHS--------LIAPADTL 359



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.314    0.128    0.361 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,891,407
Number of extensions: 256657
Number of successful extensions: 721
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 718
Number of HSP's successfully gapped: 2
Length of query: 389
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 289
Effective length of database: 8,364,969
Effective search space: 2417476041
Effective search space used: 2417476041
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 113 (48.1 bits)