BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0620500 Os02g0620500|Os02g0620500
(498 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G13510.1 | chr4:7858220-7859725 FORWARD LENGTH=502 613 e-176
AT3G24300.1 | chr3:8805858-8807354 REVERSE LENGTH=499 583 e-167
AT3G24290.1 | chr3:8801400-8802890 REVERSE LENGTH=497 575 e-164
AT1G64780.1 | chr1:24061021-24062565 REVERSE LENGTH=515 575 e-164
AT4G28700.1 | chr4:14161681-14163195 FORWARD LENGTH=505 557 e-159
AT2G38290.1 | chr2:16039672-16042291 REVERSE LENGTH=476 72 8e-13
>AT4G13510.1 | chr4:7858220-7859725 FORWARD LENGTH=502
Length = 501
Score = 613 bits (1580), Expect = e-176, Method: Compositional matrix adjust.
Identities = 317/504 (62%), Positives = 368/504 (73%), Gaps = 20/504 (3%)
Query: 1 MATCLDSLGPLLGGAANSTDAANYIC-------NRFTDTSSAVDATYLLFSAYLVFAMQL 53
M+ L LLG N+T AANYIC N+F DT+ A+D TYLLFSAYLVF+MQL
Sbjct: 1 MSCSATDLAVLLG--PNATAAANYICGQLGDVNNKFIDTAFAIDNTYLLFSAYLVFSMQL 58
Query: 54 GFAMLCAGSVRAKNSMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSKGFIGKQFFGLKHM 113
GFAMLCAGSVRAKN+MNIMLTNVLD +PS GFIGK +FGLK +
Sbjct: 59 GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGSPSNGFIGKHYFGLKDI 118
Query: 114 PQTGYDYDFFLFQWXXXXXXXXXXXXXXXERTRFSAYLIYSAFLTGFVYPVVSHWFWSTD 173
P DY FL+QW ERT+F AYLIYS+FLTGFVYPVVSHWFWS D
Sbjct: 119 PTASADYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 178
Query: 174 GWASAGRLTGPLLFKSGVIDFAGSGVVHLVGGIAGLWGAFIEGPRIGRFDAAGRTVAMKG 233
GWAS R G LLF +G IDFAGSGVVH+VGGIAGLWGA IEGPR+GRFD GR +A++G
Sbjct: 179 GWASPFRTDGDLLFSTGAIDFAGSGVVHMVGGIAGLWGALIEGPRLGRFDNGGRAIALRG 238
Query: 234 HSASLVVLGTXXXXXXXXXXNPGSFTTISKIYGESGTIDGQWSAVGRTAVTTSLAGSVAA 293
HSASLVVLGT NPGSF I Y E+GT +GQWSAVGRTAVTT+LAG AA
Sbjct: 239 HSASLVVLGTFLLWFGWYGFNPGSFNKILVTY-ETGTYNGQWSAVGRTAVTTTLAGCTAA 297
Query: 294 LTTLYGKRWLTGHWNVTDVCNGLLGGFAAITAGCSVVDPWASVICGFVSAWVLIGCNKLS 353
LTTL+GKR L+GHWNVTDVCNGLLGGFAAIT GCSVV+PWA++ICGFV+A VL+GCNKL+
Sbjct: 298 LTTLFGKRLLSGHWNVTDVCNGLLGGFAAITGGCSVVEPWAAIICGFVAALVLLGCNKLA 357
Query: 354 LILKFDDPLEATQLHAGCGAWGIIFTALFARREYVELIYG-VPGRPYGLFMGGGGRLLAA 412
LK+DDPLEA QLH GCGAWG+IFTALFA+ +Y+ IYG PGRP+GLFMGGGG+LL A
Sbjct: 358 EKLKYDDPLEAAQLHGGCGAWGLIFTALFAQEKYLNQIYGNKPGRPHGLFMGGGGKLLGA 417
Query: 413 HIVQILVIVGWVSATMGTLFYVLHRFGLLRVSPATEMEGMDPTCHGGFGYV--DEDEGER 470
++QI+VI GWVSATMGTLF++L + LLR+S EM GMD T HGGF Y+ D+DE +
Sbjct: 418 QLIQIIVITGWVSATMGTLFFILKKMKLLRISSEDEMAGMDMTRHGGFAYMYFDDDESHK 477
Query: 471 RVRAKSAAETARVEPRKSPEQAAA 494
++ + RVEPR SP + A
Sbjct: 478 AIQLR------RVEPR-SPSPSGA 494
>AT3G24300.1 | chr3:8805858-8807354 REVERSE LENGTH=499
Length = 498
Score = 583 bits (1503), Expect = e-167, Method: Compositional matrix adjust.
Identities = 301/490 (61%), Positives = 351/490 (71%), Gaps = 13/490 (2%)
Query: 7 SLGPLLGGAANSTDAANYIC-------NRFTDTSSAVDATYLLFSAYLVFAMQLGFAMLC 59
L LLG N+T AA+YIC N+FTD + A+D TYLLFSAYLVFAMQLGFAMLC
Sbjct: 11 DLATLLG--PNATAAADYICGQLGTVNNKFTDAAFAIDNTYLLFSAYLVFAMQLGFAMLC 68
Query: 60 AGSVRAKNSMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSKGFIGKQFFGLKHMPQTGYD 119
AGSVRAKN+MNIMLTNVLD S+GFIG+ F L+ P D
Sbjct: 69 AGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGGSSEGFIGRHNFALRDFPTPTAD 128
Query: 120 YDFFLFQWXXXXXXXXXXXXXXXERTRFSAYLIYSAFLTGFVYPVVSHWFWSTDGWASAG 179
Y FFL+QW ERT+F AYLIYS+FLTGFVYPVVSHWFWS DGWAS
Sbjct: 129 YSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASPF 188
Query: 180 RLTGPLLFKSGVIDFAGSGVVHLVGGIAGLWGAFIEGPRIGRFDAAGRTVAMKGHSASLV 239
R LF +G IDFAGSGVVH+VGGIAGLWGA IEGPR GRF+ GR +A++GHSASLV
Sbjct: 189 RSADDRLFSTGAIDFAGSGVVHMVGGIAGLWGALIEGPRRGRFEKGGRAIALRGHSASLV 248
Query: 240 VLGTXXXXXXXXXXNPGSFTTISKIYGESGTIDGQWSAVGRTAVTTSLAGSVAALTTLYG 299
VLGT NPGSFT I Y SG+ GQWS +GRTAV T+L+G AALTTL+G
Sbjct: 249 VLGTFLLWFGWYGFNPGSFTKILVPY-NSGSNYGQWSGIGRTAVNTTLSGCTAALTTLFG 307
Query: 300 KRWLTGHWNVTDVCNGLLGGFAAITAGCSVVDPWASVICGFVSAWVLIGCNKLSLILKFD 359
KR L+GHWNVTDVCNGLLGGFAAITAGCSVV+PWA+++CGF+++ VLIGCNKL+ ++++D
Sbjct: 308 KRLLSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFMASVVLIGCNKLAELVQYD 367
Query: 360 DPLEATQLHAGCGAWGIIFTALFARREYVELIYG-VPGRPYGLFMGGGGRLLAAHIVQIL 418
DPLEA QLH GCGAWG+IF LFA+ +Y+ +YG PGRPYGLFMGGGG+LL A +VQIL
Sbjct: 368 DPLEAAQLHGGCGAWGLIFVGLFAKEKYLNEVYGATPGRPYGLFMGGGGKLLGAQLVQIL 427
Query: 419 VIVGWVSATMGTLFYVLHRFGLLRVSPATEMEGMDPTCHGGFGYV--DEDEGERRVRAKS 476
VIVGWVSATMGTLF++L R LLR+S EM+GMD T HGGF Y+ D D+ RV S
Sbjct: 428 VIVGWVSATMGTLFFILKRLNLLRISEQHEMQGMDMTRHGGFAYIYHDNDDESHRVDPGS 487
Query: 477 AAETARVEPR 486
+ PR
Sbjct: 488 PFPRSATPPR 497
>AT3G24290.1 | chr3:8801400-8802890 REVERSE LENGTH=497
Length = 496
Score = 575 bits (1483), Expect = e-164, Method: Compositional matrix adjust.
Identities = 297/474 (62%), Positives = 344/474 (72%), Gaps = 12/474 (2%)
Query: 7 SLGPLLGGAANSTDAANYIC-------NRFTDTSSAVDATYLLFSAYLVFAMQLGFAMLC 59
L LLG N+T AA+YIC N+FTD + A+D TYLLFSAYLVFAMQLGFAMLC
Sbjct: 11 DLSALLG--PNATAAADYICGQLGSVNNKFTDAAYAIDNTYLLFSAYLVFAMQLGFAMLC 68
Query: 60 AGSVRAKNSMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSKGFIGKQFFGLKHMPQTGYD 119
AGSVRAKN+MNIMLTNVLD S GFIG+ FGL++ P D
Sbjct: 69 AGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGESSDGFIGRHNFGLQNFPTLTSD 128
Query: 120 YDFFLFQWXXXXXXXXXXXXXXXERTRFSAYLIYSAFLTGFVYPVVSHWFWSTDGWASAG 179
Y FFL+QW ERT+F AYLIYS+FLTGFVYPVVSHWFWS DGWAS
Sbjct: 129 YSFFLYQWAFAIAAAGITSGSIAERTKFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASPF 188
Query: 180 RLTGPLLFKSGVIDFAGSGVVHLVGGIAGLWGAFIEGPRIGRFDAAGRTVAMKGHSASLV 239
R + LF +G IDFAGSGVVH+VGGIAGLWGA IEGPRIGRF G +A++GHSASLV
Sbjct: 189 R-SEDRLFGTGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFPDGGHAIALRGHSASLV 247
Query: 240 VLGTXXXXXXXXXXNPGSFTTISKIYGESGTIDGQWSAVGRTAVTTSLAGSVAALTTLYG 299
VLGT NPGSFT I Y SG+ GQWS +GRTAVTT+L+G AALTTL+G
Sbjct: 248 VLGTFLLWFGWYGFNPGSFTKILIPY-NSGSNYGQWSGIGRTAVTTTLSGCTAALTTLFG 306
Query: 300 KRWLTGHWNVTDVCNGLLGGFAAITAGCSVVDPWASVICGFVSAWVLIGCNKLSLILKFD 359
KR L+GHWNVTDVCNGLLGGFAAITAGCSVVDPWA+++CGFV++ VLIGCNKL+ +LK+D
Sbjct: 307 KRLLSGHWNVTDVCNGLLGGFAAITAGCSVVDPWAAIVCGFVASLVLIGCNKLAELLKYD 366
Query: 360 DPLEATQLHAGCGAWGIIFTALFARREYVELIYGV-PGRPYGLFMGGGGRLLAAHIVQIL 418
DPLEA QLH GCGAWG+IF LFA+ +Y+ +YG PGR YGLFMGGGG+LL A +VQI+
Sbjct: 367 DPLEAAQLHGGCGAWGLIFVGLFAKEKYINEVYGASPGRHYGLFMGGGGKLLGAQLVQII 426
Query: 419 VIVGWVSATMGTLFYVLHRFGLLRVSPATEMEGMDPTCHGGFGYVDEDEGERRV 472
VIVGWVSATMGTLF++L + LLR+S EM GMD HGGF Y+ D + +
Sbjct: 427 VIVGWVSATMGTLFFILKKLNLLRISEQHEMRGMDLAGHGGFAYIYHDNDDDSI 480
>AT1G64780.1 | chr1:24061021-24062565 REVERSE LENGTH=515
Length = 514
Score = 575 bits (1482), Expect = e-164, Method: Compositional matrix adjust.
Identities = 301/465 (64%), Positives = 339/465 (72%), Gaps = 7/465 (1%)
Query: 25 ICNRFTDTSSAVDATYLLFSAYLVFAMQLGFAMLCAGSVRAKNSMNIMLTNVLDXXXXXX 84
I N+ +DT+ AVD TYLLFSAYLVFAMQLGFAMLCAGSVRAKN+MNIMLTNVLD
Sbjct: 40 ISNKLSDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGAI 99
Query: 85 XXXXXXXXXXXXTPSKGFIGKQ--FFGLKHMPQT-GYDYDFFLFQWXXXXXXXXXXXXXX 141
TPS GFIG+ FF L P+ G D+ FFL+QW
Sbjct: 100 SYYLFGFAFAFGTPSNGFIGRHHSFFALSSYPERPGSDFSFFLYQWAFAIAAAGITSGSI 159
Query: 142 XERTRFSAYLIYSAFLTGFVYPVVSHWFWSTDGWASAGRLTGPLLFKSGVIDFAGSGVVH 201
ERT+F AYLIYS FLTGFVYP VSHWFWS+DGWASA R LLF SG IDFAGSGVVH
Sbjct: 160 AERTQFVAYLIYSTFLTGFVYPTVSHWFWSSDGWASASRSDNNLLFGSGAIDFAGSGVVH 219
Query: 202 LVGGIAGLWGAFIEGPRIGRFDAAGRTVAMKGHSASLVVLGTXXXXXXXXXXNPGSFTTI 261
+VGGIAGL GA +EGPRIGRFD +GR+VA++GHSASLVVLGT NPGSF TI
Sbjct: 220 MVGGIAGLCGALVEGPRIGRFDRSGRSVALRGHSASLVVLGTFLLWFGWYGFNPGSFLTI 279
Query: 262 SKIYGESGTIDGQWSAVGRTAVTTSLAGSVAALTTLYGKRWLTGHWNVTDVCNGLLGGFA 321
K Y +S GQWSAVGRTAVTT+L+G AALTTL+ KR L GHWNV DVCNGLLGGFA
Sbjct: 280 LKGYDKSRPYYGQWSAVGRTAVTTTLSGCTAALTTLFSKRLLAGHWNVIDVCNGLLGGFA 339
Query: 322 AITAGCSVVDPWASVICGFVSAWVLIGCNKLSLILKFDDPLEATQLHAGCGAWGIIFTAL 381
AIT+GC+VV+PWA+++CGFV++WVLIG N L+ LK+DDPLEA QLH GCGAWG+IFT L
Sbjct: 340 AITSGCAVVEPWAAIVCGFVASWVLIGFNLLAKKLKYDDPLEAAQLHGGCGAWGLIFTGL 399
Query: 382 FARREYVELIYGVPGRPYGLFMGGGGRLLAAHIVQILVIVGWVSATMGTLFYVLHRFGLL 441
FAR+EYV IY RPYGLFMGGGG+LLAA IVQI+VIVGWV+ TMG LFY LH+ LL
Sbjct: 400 FARKEYVNEIYS-GDRPYGLFMGGGGKLLAAQIVQIIVIVGWVTVTMGPLFYGLHKMNLL 458
Query: 442 RVSPATEMEGMDPTCHGGFGYVDEDEGERRVRAKSAAETA-RVEP 485
R+S EM GMD T HGGF Y DE + V K A RVEP
Sbjct: 459 RISAEDEMAGMDMTRHGGFAYAYNDEDD--VSTKPWGHFAGRVEP 501
>AT4G28700.1 | chr4:14161681-14163195 FORWARD LENGTH=505
Length = 504
Score = 557 bits (1435), Expect = e-159, Method: Compositional matrix adjust.
Identities = 303/476 (63%), Positives = 352/476 (73%), Gaps = 15/476 (3%)
Query: 6 DSLGPLLGGAANSTDAA---NYICNRF-------TDTSSAVDATYLLFSAYLVFAMQLGF 55
L PLL G AN+T AA YIC RF TD + A+D TYLLFSAYLVFAMQLGF
Sbjct: 10 SDLIPLLSGGANATAAAAAAEYICGRFDTVAGKFTDAAYAIDNTYLLFSAYLVFAMQLGF 69
Query: 56 AMLCAGSVRAKNSMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSKGFIGKQFFGLKHMPQ 115
AMLCAGSVRAKN+MNIMLTNV+D +PS GFIGK FFG+ PQ
Sbjct: 70 AMLCAGSVRAKNTMNIMLTNVIDAAAGGLFYYLFGFAFAFGSPSNGFIGKHFFGMYDFPQ 129
Query: 116 TGYDYDFFLFQWXXXXXXXXXXXXXXXERTRFSAYLIYSAFLTGFVYPVVSHWFWSTDGW 175
+DY +FL+QW ERT+F AYLIYS+FLTG VYP+VSHWFWS+DGW
Sbjct: 130 PTFDYPYFLYQWTFAIAAAGITSGSIAERTQFVAYLIYSSFLTGLVYPIVSHWFWSSDGW 189
Query: 176 ASAGRLTGPLLFKSGVIDFAGSGVVHLVGGIAGLWGAFIEGPRIGRFDAAGRTVAMKGHS 235
AS R + LLF+SGVIDFAGSGVVH+VGGIAGLWGA IEGPRIGRF G+ V ++GHS
Sbjct: 190 ASPAR-SENLLFQSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFGVGGKPVTLRGHS 248
Query: 236 ASLVVLGTXXXXXXXXXXNPGSFTTISKIYGES--GTIDGQWSAVGRTAVTTSLAGSVAA 293
A+LVVLGT NPGSF TI K YGE+ + GQWSAVGRTAVTT+LAG AA
Sbjct: 249 ATLVVLGTFLLWFGWYGFNPGSFATIFKAYGETPGSSFYGQWSAVGRTAVTTTLAGCTAA 308
Query: 294 LTTLYGKRWLTGHWNVTDVCNGLLGGFAAITAGCSVVDPWASVICGFVSAWVLIGCNKLS 353
LTTL+GKR + G+WNVTDVCNGLLGGFAAIT+GCSVV+PWA+++CGFV+AWVL+GCN+L+
Sbjct: 309 LTTLFGKRLIDGYWNVTDVCNGLLGGFAAITSGCSVVEPWAALVCGFVAAWVLMGCNRLA 368
Query: 354 LILKFDDPLEATQLHAGCGAWGIIFTALFARREYVELIY-GVPGRPYGLFMGGGGRLLAA 412
L+FDDPLEA QLH GCGAWGIIFT LFA + Y+ I+ G P RP+GL MGGGGRLLAA
Sbjct: 369 EKLQFDDPLEAAQLHGGCGAWGIIFTGLFAEKRYIAEIFGGDPNRPFGLLMGGGGRLLAA 428
Query: 413 HIVQILVIVGWVSATMGTLFYVLHRFGLLRVSPATEMEGMDPTCHGGFGYV-DEDE 467
H+VQILVI GWVS TMGTLF++LH+ LLR+ E+ G+DPT HGG Y+ EDE
Sbjct: 429 HVVQILVITGWVSVTMGTLFFILHKLKLLRIPAEDEIAGVDPTSHGGLAYMYTEDE 484
>AT2G38290.1 | chr2:16039672-16042291 REVERSE LENGTH=476
Length = 475
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 136/359 (37%), Gaps = 49/359 (13%)
Query: 144 RTRFSAYLIYSAFLTGFVYPVVSHWFWSTDGWASAGRLTGPLLFKSGVIDFAGSGVVHLV 203
R A++ + F Y V ++ W G L++ GVID++G V+HL
Sbjct: 142 RMNIKAWMAFVPLWLIFSYTVGAYSIWG-----------GGFLYQWGVIDYSGGYVIHLS 190
Query: 204 GGIAGLWGAFIEGPRIGRFDAAGRTVAMKGHSASLVVLGTXXXXXXXXXXNPGSFTTISK 263
G+AG A+ GPR A R + +
Sbjct: 191 SGVAGFVAAYWVGPR----PKADRERFPPNNVLLM------------------LAGAGLL 228
Query: 264 IYGESGTIDGQWSAVGRTAVTTSLAGSVAALTTLYGKRWLT------GHWNVTDVCNGLL 317
G SG G A T+ L +++A T+L W T G +V G++
Sbjct: 229 WMGWSGFNGGAPYAANLTSSIAVLNTNLSAATSLL--VWTTLDVIFFGKPSVIGAIQGMV 286
Query: 318 GGFAAITAGCSVVDPWASVICGFVS-----AWVLIGCNKLSLILKFDDPLEATQLHAGCG 372
G A +T G ++ WA++I G VS A ++I K +L+ K DD L HA G
Sbjct: 287 TGLAGVTPGAGLIQTWAAIIIGVVSGTAPWASMMIIHKKSALLQKVDDTLAVFYTHAVAG 346
Query: 373 AWGIIFTALFARREYVELIYGVPGRPYGLFMGGGGRLLAAHIVQILVIVGWVSATMGTLF 432
G I T LFA + L+ +P + G GG+ L + I W + +
Sbjct: 347 LLGGIMTGLFAHPDLCVLVLPLPATRGAFYGGNGGKQLLKQLAGAAFIAVWNVVSTTIIL 406
Query: 433 YVLHRFGLLRVSPATEMEGM-DPTCHGGFGYVDEDEGERRVRAKSAAETARVEPRKSPE 490
+ F LR+ A E G+ D HG Y +GE+ + + R + P
Sbjct: 407 LAIRVFIPLRM--AEEELGIGDDAAHGEEAYALWGDGEKFDATRHVQQFERDQEAAHPS 463
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.139 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,831,839
Number of extensions: 385205
Number of successful extensions: 1082
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1049
Number of HSP's successfully gapped: 6
Length of query: 498
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 395
Effective length of database: 8,282,721
Effective search space: 3271674795
Effective search space used: 3271674795
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 114 (48.5 bits)