BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0617300 Os02g0617300|AK067382
         (755 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G20190.1  | chr2:8711862-8718813 REVERSE LENGTH=1440           872   0.0  

>AT2G20190.1 | chr2:8711862-8718813 REVERSE LENGTH=1440
          Length = 1439

 Score =  872 bits (2254), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/749 (61%), Positives = 551/749 (73%), Gaps = 11/749 (1%)

Query: 1   MEAALEAARAKDTKQRLAGVXXXXXXXXXXXXXXXTSAEVTSLVDACMDLTKDGNFRXXX 60
           ME ALE ARAKDTK+R+A V               + AEVTSLVD+C+DL KD NFR   
Sbjct: 1   MEEALEMARAKDTKERMAAVERLHQLLEASRKSL-SPAEVTSLVDSCLDLLKDSNFRVSQ 59

Query: 61  XXXXXXXXXXXXXXDHFKIHLNALVPAAVERLGDGKQPVRDAARQLLVTLMEVSSPTIIV 120
                         +H K+HLNALVPA VERLGD KQPVRDAAR+LL TLMEVSSPTIIV
Sbjct: 60  GALQALASAAVLAGEHLKLHLNALVPAVVERLGDSKQPVRDAARRLLTTLMEVSSPTIIV 119

Query: 121 ERAGSYAWTHKSWRVREEFVRTVATAVGLFASTELPLQRVLLSPVLQLLNDLNQSVRDAA 180
           ERAGSYAW HKSWRVREEF RTV +A+GLFASTELPLQRV+L+P+LQ+LND NQ+VR+AA
Sbjct: 120 ERAGSYAWMHKSWRVREEFARTVTSAIGLFASTELPLQRVILAPILQMLNDPNQAVREAA 179

Query: 181 ISCIEEMYRNMGSQFHEELQRHNLPSYMLKDINSRLDKIEPKARSSDGARMQYKVIE-RS 239
           I CIEEMY   GSQF EELQRH+LPSYM+KDIN+RL++IEP+ RS+DG    + V E ++
Sbjct: 180 ILCIEEMYMQGGSQFREELQRHHLPSYMVKDINARLERIEPQLRSTDGRSAHHVVNEVKA 239

Query: 240 VSANAKRGSPRKKSSTRESTLFGGDSDITEKPVEPIRVHSEKELLREMEKIASALDPEKD 299
            S N K+ SPR K+ TRE++LFGGD+DITEKP+EPI+V+SEKEL+RE EKIA+ L PEKD
Sbjct: 240 SSVNPKKSSPRAKAPTRENSLFGGDADITEKPIEPIKVYSEKELIREFEKIAATLVPEKD 299

Query: 300 WSIRIAAMQRIEALVYGGAIDYPSFLTLLKQLVPPLSAQLSDRRSSIVKQACHLLNMLSK 359
           WS+RI+AM+R+E LV GGA DY  F  LLKQLV PLS QL+DRRS+IVKQACHLL +LSK
Sbjct: 300 WSMRISAMRRVEGLVAGGATDYSCFRGLLKQLVGPLSTQLADRRSTIVKQACHLLCLLSK 359

Query: 360 ELLGDFEACAEIFIPVLFKLVVITVLVIAESADNCIKTILRNCKVSRILPLIADTAKNDR 419
           ELLGDFEACAE FIPVLFKLVVITVLVIAESADNCIKT+LRNCK +R+LP IA++AK+DR
Sbjct: 360 ELLGDFEACAETFIPVLFKLVVITVLVIAESADNCIKTMLRNCKAARVLPRIAESAKHDR 419

Query: 420 SAILRARCSEYAILILEYWADAPEIQRASDIYEDLIKCCVADAMSEVRATARSCYRMFTK 479
           +AILRARC EYA+L LE+W DAPEIQR+ D+YEDLI+CCVADAMSEVRATAR CYRMF K
Sbjct: 420 NAILRARCCEYALLTLEHWPDAPEIQRSVDLYEDLIRCCVADAMSEVRATARMCYRMFAK 479

Query: 480 TWPERSRRLFMSFDPAVQRIINDEDGGLQKRYPSPSLREKGVQLSHASSHASGTHLAGYS 539
           TWP+RSRRLF SFDP +QR+IN+EDGG+ +R+ SPS+RE+  Q S + + A  ++L GY 
Sbjct: 480 TWPDRSRRLFSSFDPVIQRLINEEDGGIHRRHASPSVRERHSQPSFSQTSAP-SNLPGYG 538

Query: 540 TSAIVAMDKSAAIXXXXXXXXXXXXXXXKKIGRTAERSIESVLSSSKQKVSAIESLLKG- 598
           TSAIVAMD+S+ +               K + + +ERS+ESVL SSKQKVSAIES+L+G 
Sbjct: 539 TSAIVAMDRSSNLSSGGSLSSGLLLSQSKDVNKGSERSLESVLQSSKQKVSAIESMLRGL 598

Query: 599 -VSGRQNFSAMRSTSLDLGVDPPSSRDPPIPLAATASDHLSLQNSILLDSSLPSIN--NT 655
            +S RQN +A+RS+SLDLGVDPPSSRDPP    A AS+      S     S  SIN  + 
Sbjct: 599 HISDRQNPAALRSSSLDLGVDPPSSRDPPFHAVAPASNS---HTSSAAAESTHSINKGSN 655

Query: 656 RNGGSRLVDTVNPHVANKERXXXXXXXXXXXXXXXXXXXPYARSSSGRSPYGSTMEESND 715
           RNGG  L D +    A+K+                      A+  S R+   S++EESND
Sbjct: 656 RNGGLGLSDIITQIQASKDSGRSSYRGNLLSESHPTFSSLTAKRGSERNER-SSLEESND 714

Query: 716 TWSTRRMPQMQMDRHYLDMTYRDASHRKA 744
               RR      DR  +D  YRD + R++
Sbjct: 715 AREVRRFMAGHFDRQQMDTAYRDLTFRES 743



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.130    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,620,533
Number of extensions: 514648
Number of successful extensions: 1681
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1675
Number of HSP's successfully gapped: 1
Length of query: 755
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 649
Effective length of database: 8,200,473
Effective search space: 5322106977
Effective search space used: 5322106977
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)