BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0612800 Os02g0612800|AK072455
(755 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31880.1 | chr4:15419435-15423939 REVERSE LENGTH=874 211 9e-55
AT1G15940.1 | chr1:5473672-5478050 FORWARD LENGTH=991 200 3e-51
AT1G80810.2 | chr1:30365575-30368898 FORWARD LENGTH=775 181 2e-45
AT5G47690.3 | chr5:19317899-19327014 FORWARD LENGTH=1608 165 7e-41
AT1G77600.3 | chr1:29152890-29162156 REVERSE LENGTH=1425 116 4e-26
AT5G10950.1 | chr5:3459557-3461632 REVERSE LENGTH=396 86 8e-17
AT4G02070.1 | chr4:906079-912930 FORWARD LENGTH=1325 51 2e-06
AT4G32620.2 | chr4:15731968-15737222 FORWARD LENGTH=1541 51 2e-06
>AT4G31880.1 | chr4:15419435-15423939 REVERSE LENGTH=874
Length = 873
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 154/247 (62%), Gaps = 3/247 (1%)
Query: 6 ELEGKLRDVGEKLQSPPDDVDALLKLIHEAEIYILKVEQAPSESMISAITPAMKALIKKE 65
ELE ++ + GEKL PP +D LL + + + + +VEQ+P +SM +A+TP MK L+ +
Sbjct: 7 ELENQIIEAGEKLIDPPSSLDELLSFLDKLFVSLAEVEQSPPDSMQNALTPLMKGLVGGK 66
Query: 66 LLDNSSYEVKLSVVSCISEITRITAPDTPYDDDVMKDVFSIMVGSFEKLDDMENPLFRRI 125
L +S +VK++V +CISEITRITAPD PYDDD MK+VF ++V SFE L D + + +
Sbjct: 67 LFKHSDVDVKVAVAACISEITRITAPDAPYDDDQMKEVFKLIVSSFEDLVDKSSRSYAKR 126
Query: 126 VAILETVAKVRLCVVMLDLECEDLILQMFHNFFTTVKPNHPENVTNCMTTXXXXXXXXXX 185
++ILETVAKVR CVVMLDLEC+ L+++MF +F ++ +H NV + M
Sbjct: 127 ISILETVAKVRSCVVMLDLECDALLIEMFQHFLKAIRDHHSGNVFSSMENIMTLVLEESE 186
Query: 186 XXXXXXXXCLLKHAKSELKETSAASFELAEKVIGACSEKLKPVFLQLLK--GTSLNEYDN 243
+L H+ + E S S LAE+V+ C+ KLK + +K G L++Y N
Sbjct: 187 DIPSEMLSPIL-HSVKKDDEISQVSRRLAEQVLSNCASKLKTYLTEAVKSSGVPLDKYSN 245
Query: 244 IIATICE 250
I+A+ICE
Sbjct: 246 IVASICE 252
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Query: 467 NNGSKRKRSQEDEQETPRSRKNKGLDASLVGARIQVWWPDDKKFYKGIVDSFDTASKRHK 526
N+ +KRKRS + K SLVG+RI+VWWP D+ +YKG+V+S+D A K+H
Sbjct: 589 NSNTKRKRSL---------GQGKASGESLVGSRIKVWWPMDQAYYKGVVESYDAAKKKHL 639
Query: 527 IAYDDGDVEVLLLRDEKW 544
+ YDDGD E+L L+++KW
Sbjct: 640 VIYDDGDQEILYLKNQKW 657
>AT1G15940.1 | chr1:5473672-5478050 FORWARD LENGTH=991
Length = 990
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 146/245 (59%), Gaps = 2/245 (0%)
Query: 8 EGKLRDVGEKLQSPPDDVDALLKLIHEAEIYILKVEQAPSESMISAITPAMKALIKKELL 67
E L D E L P DA L L+ E + VEQ S S+ A+ P M+AL+ +LL
Sbjct: 13 EQALTDAAENLLKPHFSTDATLSLLEVMESLLATVEQDLSSSVQKALHPPMRALVSADLL 72
Query: 68 DNSSYEVKLSVVSCISEITRITAPDTPYDDDVMKDVFSIMVGSFEKLDDMENPLFRRIVA 127
N +V++SVVSC++EI RITAP+ PY+D+ MKD+F + + +FEKL D + +R+
Sbjct: 73 RNPDSDVRVSVVSCLTEIMRITAPEAPYNDEQMKDIFQVTIEAFEKLADASSRSYRKAEV 132
Query: 128 ILETVAKVRLCVVMLDLECEDLILQMFHNFFTTVKPNHPENVTNCMTTXXXXXXXXXXXX 187
ILETVAKVR +VMLDLEC+DL+L+MF F ++P+HP+ V M T
Sbjct: 133 ILETVAKVRSSLVMLDLECDDLVLEMFQRFLKIIRPDHPQLVLVSMETIMITVIDESEEV 192
Query: 188 XXXXXXCLLKHAKSELKETSAASFELAEKVIGACSEKLKPVFLQLLK--GTSLNEYDNII 245
LL K + ++ S A+ L EKV+ +C+ KL+P ++ LK GTSL+ Y ++
Sbjct: 193 PMDLLEILLTTVKKDSQDVSPAALTLVEKVLSSCTCKLQPCIMEALKSSGTSLDMYSPVV 252
Query: 246 ATICE 250
++IC+
Sbjct: 253 SSICQ 257
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 491 LDASLVGARIQVWWPDDKKFYKGIVDSFDTASKRHKIAYDDGDVEVLLLRDEKWEFV 547
L LVG R+ VWWP DKKFY+G++ S+ K H++ Y DGDVE L L+ E+++ +
Sbjct: 567 LGEELVGKRVNVWWPLDKKFYEGVIKSYCRVKKMHQVTYSDGDVEELNLKKERFKII 623
>AT1G80810.2 | chr1:30365575-30368898 FORWARD LENGTH=775
Length = 774
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 128/203 (63%), Gaps = 2/203 (0%)
Query: 50 MISAITPAMKALIKKELLDNSSYEVKLSVVSCISEITRITAPDTPYDDDVMKDVFSIMVG 109
M SA+ P+ AL+ +LL + +V++SVVSC++EI RITAP+TPY DD+MK++F + +
Sbjct: 1 MQSALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRITAPETPYSDDLMKEIFRLTIE 60
Query: 110 SFEKLDDMENPLFRRIVAILETVAKVRLCVVMLDLECEDLILQMFHNFFTTVKPNHPENV 169
+FEKL D + +++ +L+ VAKV+ C+VMLDLEC DLILQMF NFF ++ +HP+ V
Sbjct: 61 AFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFKFIRSDHPQLV 120
Query: 170 TNCMTTXXXXXXXXXXXXXXXXXXCLLKHAKSELKETSAASFELAEKVIGACSEKLKPVF 229
+ M LL K E + S S+ LAEKV+ C+ KLKP
Sbjct: 121 FSSMELIMIAIIDETEQVSTDLLDSLLATVKKENQNVSPMSWSLAEKVLSRCARKLKPYI 180
Query: 230 LQLLK--GTSLNEYDNIIATICE 250
++ LK GTSL+ Y ++++IC+
Sbjct: 181 IEALKSRGTSLDMYSPVVSSICQ 203
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 15/105 (14%)
Query: 472 RKRSQEDEQETPRSRKNK----------GLDASLVGARIQVWWPDDKKFYKGIVDSFDTA 521
R+ + E E+ETP+S + G LVG R+ +WWP DK FY+G++DS+ T
Sbjct: 472 RQLANESEEETPKSHPTRRRTVRKEVSDGFGEDLVGKRVNIWWPLDKTFYEGVIDSYCTR 531
Query: 522 SKRHKIAYDDGDVEVLLLRDEKWEFV-----SEEQDKTPDVASEI 561
K H++ Y DGD E L L +E+WE + ++EQDK D+ I
Sbjct: 532 KKMHRVIYSDGDSEELNLTEERWELLEDDTSADEQDKEIDLPESI 576
>AT5G47690.3 | chr5:19317899-19327014 FORWARD LENGTH=1608
Length = 1607
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 117/166 (70%)
Query: 8 EGKLRDVGEKLQSPPDDVDALLKLIHEAEIYILKVEQAPSESMISAITPAMKALIKKELL 67
E +L+++G KL P D+LLKL+ EA + + ++EQ+P +++ +I P + A+IK E+L
Sbjct: 6 EEQLKELGSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPPPAVLKSIQPFLDAVIKPEIL 65
Query: 68 DNSSYEVKLSVVSCISEITRITAPDTPYDDDVMKDVFSIMVGSFEKLDDMENPLFRRIVA 127
++ +VKL V SC+SEITRITAP+ PY D++MKD+F ++V +F L+D+ P F R V
Sbjct: 66 NHQDKDVKLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAGLNDVSGPSFGRRVL 125
Query: 128 ILETVAKVRLCVVMLDLECEDLILQMFHNFFTTVKPNHPENVTNCM 173
ILETVAK R CVVMLDLEC+DL+ ++F F + +HPE V + M
Sbjct: 126 ILETVAKYRSCVVMLDLECDDLVKEVFTTFLDVARDDHPEIVFSSM 171
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 450 KSVSKGSAKTKGSQGQDNNGSKRKRSQEDEQETPRSRKNKGLDASLVGARIQVWWPDDKK 509
+S G +K K + +GS +KR +++NK ++ L+G RI+VWWP DK+
Sbjct: 1328 RSAGGGDSKLKSA-----SGSMKKRKNVSGLAKCSTKENKLVNDELIGCRIEVWWPMDKR 1382
Query: 510 FYKGIVDSFDTASKRHKIAYDDGDVEVLLLRDEKWEFV 547
FY+G V S+D+ +RH I Y+DGDVEVL L+ E+WE +
Sbjct: 1383 FYEGTVKSYDSTKQRHVILYEDGDVEVLNLKKEQWELI 1420
>AT1G77600.3 | chr1:29152890-29162156 REVERSE LENGTH=1425
Length = 1424
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 102/162 (62%), Gaps = 9/162 (5%)
Query: 18 LQSPPDDVDALLKLIHEAEIYILKVEQAPSES-------MISA-ITPAMKALIKKELLDN 69
LQ + D+L+KL+ E + K++Q PS + +I A + P K++IK LL N
Sbjct: 17 LQLSRPNKDSLVKLLREVANTLSKIDQ-PSATNKEKGLKLIEAELRPLKKSIIKHALLKN 75
Query: 70 SSYEVKLSVVSCISEITRITAPDTPYDDDVMKDVFSIMVGSFEKLDDMENPLFRRIVAIL 129
+V L V C+SE+ RI AP P++D+ ++D+F++ + F +L D +P F + IL
Sbjct: 76 RDNDVSLLVTVCVSELFRILAPHLPFEDEYLRDIFTLFIAEFSELSDTVSPYFSKRAKIL 135
Query: 130 ETVAKVRLCVVMLDLECEDLILQMFHNFFTTVKPNHPENVTN 171
ETV++++ C++MLD +C+DL+ +MF+ FF+ V+ +H +++ N
Sbjct: 136 ETVSRLKFCLLMLDEDCQDLVHEMFNMFFSLVREHHQQSLIN 177
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 494 SLVGARIQVWWPDDKKFYKGIVDSFDTASKRHKIAYDDGDVEVLLLRDEKWEFVSEE 550
+++G RI++ P D FY G V+ F++ S HKI +D+GDVE++ L E WE +S E
Sbjct: 1270 AIIGQRIKLLSPTDGCFYPGTVEKFNSKSNSHKIIFDNGDVELVCLDSESWETLSHE 1326
>AT5G10950.1 | chr5:3459557-3461632 REVERSE LENGTH=396
Length = 395
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 46/57 (80%)
Query: 494 SLVGARIQVWWPDDKKFYKGIVDSFDTASKRHKIAYDDGDVEVLLLRDEKWEFVSEE 550
+LVG+RI+VWWP D KFYKG+VDS+ ++ K+H++ Y+DGD E L L+ E+WE + E+
Sbjct: 36 ALVGSRIRVWWPMDSKFYKGVVDSYVSSKKKHRVFYEDGDKETLDLKKERWELIEED 92
>AT4G02070.1 | chr4:906079-912930 FORWARD LENGTH=1325
Length = 1324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 495 LVGARIQVWWPDDKKFYKGIVDSFDTASKRHKIAYDDGDVEVLLLRDEKWEFVSEEQ 551
+VG +++V+WP DKK+Y G V +D +H + Y+DG+ E L L EK E+V E+
Sbjct: 124 VVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWVVGEK 180
>AT4G32620.2 | chr4:15731968-15737222 FORWARD LENGTH=1541
Length = 1540
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 495 LVGARIQVWWPDDKKFYKGIVDSFDTASKRHKIAYDDGDVEVLLLRDEKWEFV 547
L+ +I+V+WP D+++Y G VD FD H + YDD D E + L+ E+++ +
Sbjct: 355 LLNKKIKVFWPLDERWYHGFVDGFDGDKNLHHVKYDDRDEEWINLQGERFKIL 407
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.305 0.126 0.343
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,177,720
Number of extensions: 593405
Number of successful extensions: 2500
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 2491
Number of HSP's successfully gapped: 14
Length of query: 755
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 649
Effective length of database: 8,200,473
Effective search space: 5322106977
Effective search space used: 5322106977
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 116 (49.3 bits)