BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0612300 Os02g0612300|AK069360
(243 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G44200.1 | chr5:17802062-17803875 REVERSE LENGTH=258 281 3e-76
AT3G10400.1 | chr3:3232636-3233421 FORWARD LENGTH=262 55 5e-08
AT2G18510.1 | chr2:8031554-8033517 REVERSE LENGTH=364 54 9e-08
AT3G46020.1 | chr3:16912511-16913250 REVERSE LENGTH=103 54 1e-07
AT2G27330.1 | chr2:11695350-11696563 REVERSE LENGTH=117 52 2e-07
AT1G60650.1 | chr1:22340089-22342148 FORWARD LENGTH=293 52 3e-07
AT1G66260.1 | chr1:24695895-24697883 REVERSE LENGTH=296 52 3e-07
AT2G37220.1 | chr2:15634980-15636331 REVERSE LENGTH=290 51 6e-07
AT5G37720.1 | chr5:14981805-14983978 REVERSE LENGTH=289 50 9e-07
AT5G06210.1 | chr5:1878497-1879515 FORWARD LENGTH=147 50 1e-06
AT1G16610.3 | chr1:5675925-5678686 REVERSE LENGTH=426 50 1e-06
AT5G12190.1 | chr5:3940731-3941105 REVERSE LENGTH=125 50 1e-06
AT5G64200.1 | chr5:25681849-25683553 REVERSE LENGTH=304 50 1e-06
AT1G73530.1 | chr1:27643801-27645386 REVERSE LENGTH=182 49 2e-06
AT3G52150.1 | chr3:19342074-19343090 FORWARD LENGTH=254 48 6e-06
>AT5G44200.1 | chr5:17802062-17803875 REVERSE LENGTH=258
Length = 257
Score = 281 bits (718), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/239 (64%), Positives = 177/239 (74%), Gaps = 15/239 (6%)
Query: 1 MASLFKDPTKLSAYRDRRFTGTQEEYEAALQASVTVYVGNMSFYTTEEQAYELFSRAGEI 60
MASLFK+ KLSAYRDRRF+GTQEE++ AL+AS TVY+GN+SFYTTEEQ YELFSRAGEI
Sbjct: 1 MASLFKEQAKLSAYRDRRFSGTQEEFDEALRASTTVYIGNVSFYTTEEQLYELFSRAGEI 60
Query: 61 RKIIMGLDKNSKTPCGFCFILYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEXXXXX 120
+KIIMGLDKN+KTPCGFCF+L+YSRED EDAVKYISGT+LDDRPIRVDFDWGF+E
Sbjct: 61 KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 121 XXXXXXXXXDEYRTDYDPGRGGYGKMVQKELEAQRELVDYG----GAFQPNAPPQYDRGD 176
DEYRTDYDP RGGYGK+VQKELEAQR+LVDYG GA+ AP Y G
Sbjct: 121 RGRSGGQVRDEYRTDYDPARGGYGKLVQKELEAQRQLVDYGTGSLGAYPQAAPTNYGNGR 180
Query: 177 RKRGYGDSYRNDR----DYQRKRYRNDER----SSQRAPDSEFKRDA---IDSEKNPRF 224
R G +R DY RKR R+D+R +S+R D E +RD + EKNPRF
Sbjct: 181 RGGGNYGQGGQNRHGRGDYHRKRQRDDDRYGRDNSRRNTDHESRRDTDSDMRPEKNPRF 239
>AT3G10400.1 | chr3:3232636-3233421 FORWARD LENGTH=262
Length = 261
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 35 TVYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILYYSREDAEDAVKY 94
T+YV N+ F T + LFS G++ ++ + D++++ G F+LY SREDA A +
Sbjct: 58 TLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARS 117
Query: 95 ISGTMLDDRPIRVDF 109
+ +L+ R + V
Sbjct: 118 MDAKILNGRKLTVSI 132
>AT2G18510.1 | chr2:8031554-8033517 REVERSE LENGTH=364
Length = 363
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 35 TVYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILYYSREDAEDAVKY 94
TVYVG + +EE +ELF +AG + + + D+ + + FI Y S EDA+ A+K
Sbjct: 26 TVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIKV 85
Query: 95 ISGTMLDDRPIRVD 108
++ L +PIRV+
Sbjct: 86 LNMIKLHGKPIRVN 99
>AT3G46020.1 | chr3:16912511-16913250 REVERSE LENGTH=103
Length = 102
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%)
Query: 29 ALQASVTVYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILYYSREDA 88
A + S ++V +S YTT++ +LFS G+I++ + D ++ P GF FI + S +DA
Sbjct: 2 AKRISAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDA 61
Query: 89 EDAVKYISGTMLDDRPIRVDFDWGFEE 115
A+K + G ++D R I V+ EE
Sbjct: 62 RKALKSLDGKIVDGRLIFVEVAKNAEE 88
>AT2G27330.1 | chr2:11695350-11696563 REVERSE LENGTH=117
Length = 116
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 48/76 (63%)
Query: 33 SVTVYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILYYSREDAEDAV 92
S T++V +SF +TEE + FS+ G++ K+ + +DK P GF ++ + S+E+AE A+
Sbjct: 20 SSTLFVKGISFSSTEETLTQAFSQYGQVLKVDVIMDKIRCRPKGFAYVTFSSKEEAEKAL 79
Query: 93 KYISGTMLDDRPIRVD 108
++ ++D R + +D
Sbjct: 80 LELNAQLVDGRVVILD 95
>AT1G60650.1 | chr1:22340089-22342148 FORWARD LENGTH=293
Length = 292
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 36 VYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILYYSREDAEDAVKYI 95
++VG +S+ TE Q F R G+I + + + +++ P GF FI + R A+DA+K++
Sbjct: 14 IFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIKHM 73
Query: 96 SGTMLDDRPIRVD 108
G L ++ I V+
Sbjct: 74 HGRELGNKVISVN 86
>AT1G66260.1 | chr1:24695895-24697883 REVERSE LENGTH=296
Length = 295
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 28 AALQASVTVYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILYYSRED 87
+ ++ TVY+ N+ T E EL++ GE+++ + DKN + P G ++Y R D
Sbjct: 101 SGVEVGTTVYITNLDQGVTNEDIRELYAEIGELKRYAIHYDKNGR-PSGSAEVVYMRRSD 159
Query: 88 AEDAVKYISGTMLDDRPIRVDFDWGFEE 115
A A++ + +LD RP++++ G E
Sbjct: 160 AIQAMRKYNNVLLDGRPMKLEILGGNTE 187
>AT2G37220.1 | chr2:15634980-15636331 REVERSE LENGTH=290
Length = 289
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 19 FTGTQEEYEAALQASVTVYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFC 78
F E + A + ++VGN+ F Q +LF AG + + + DK + GF
Sbjct: 76 FADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFG 135
Query: 79 FILYYSREDAEDAVKYISGTMLDDRPIRVD 108
F+ S + E A + +G LD RP+RV+
Sbjct: 136 FVTMSSVSEVEAAAQQFNGYELDGRPLRVN 165
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 36 VYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILYYSREDAEDAVKYI 95
VYVGN+S+ + LFS G++ + + D++S GF F+ Y S ++ ++A+K +
Sbjct: 206 VYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSL 265
Query: 96 SGTMLDDRPIRV 107
G LD R IRV
Sbjct: 266 DGADLDGRQIRV 277
>AT5G37720.1 | chr5:14981805-14983978 REVERSE LENGTH=289
Length = 288
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 21 GTQEEYEAALQASVTVYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFI 80
G + + ++ ++V N+ T E ELFS GE+ + + DKN + P G +
Sbjct: 80 GLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSEIGEVERYAIHYDKNGR-PSGTAEV 138
Query: 81 LYYSREDAEDAVKYISGTMLDDRPIRVDFDWG 112
+Y R DA A+K + +LD RP+R++ G
Sbjct: 139 VYPRRSDAFQALKKYNNVLLDGRPMRLEILGG 170
>AT5G06210.1 | chr5:1878497-1879515 FORWARD LENGTH=147
Length = 146
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%)
Query: 36 VYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILYYSREDAEDAVKYI 95
+++G +SF TTE+ E FS+ G++ + + +D+ S GF F+ + S ++A+ A+
Sbjct: 36 LFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALMEF 95
Query: 96 SGTMLDDRPIRVDF 109
+G L+ R I VD+
Sbjct: 96 NGQQLNGRTIFVDY 109
>AT1G16610.3 | chr1:5675925-5678686 REVERSE LENGTH=426
Length = 425
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%)
Query: 29 ALQASVTVYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILYYSREDA 88
A+Q S+ ++V ++S E E+F GE+ + + +D+ P G ++ + +R DA
Sbjct: 93 AVQESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADA 152
Query: 89 EDAVKYISGTMLDDRPIRVDFDW 111
E A Y+ G +D + ++ F
Sbjct: 153 EKAQLYMDGAQIDGKVVKATFTL 175
>AT5G12190.1 | chr5:3940731-3941105 REVERSE LENGTH=125
Length = 124
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 35 TVYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILYYSREDAEDAVKY 94
+YV N+ F T E+ Y++F + G IR+I +G DK +K G F++Y DA++AV +
Sbjct: 20 VLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGCDKATK---GTAFVVYEDIYDAKNAVDH 76
Query: 95 ISGTMLDDRPIRV 107
+SG + +R + V
Sbjct: 77 LSGFNVANRYLIV 89
>AT5G64200.1 | chr5:25681849-25683553 REVERSE LENGTH=304
Length = 303
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%)
Query: 35 TVYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILYYSREDAEDAVKY 94
++ V N++F TT + Y LF++ G++ + + D+ + GF F+ Y +++A AV+
Sbjct: 17 SLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVER 76
Query: 95 ISGTMLDDRPIRVDF 109
+ G ++D R I V F
Sbjct: 77 LDGRVVDGREITVQF 91
>AT1G73530.1 | chr1:27643801-27645386 REVERSE LENGTH=182
Length = 181
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 36 VYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILYYSREDAEDAVKYI 95
+YV +SF TTE+ + F + G + + M +DK + P GF F+ Y + E+A A++ +
Sbjct: 79 LYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAIQGM 138
Query: 96 SGTMLDDRPIRVD 108
G LD R I V+
Sbjct: 139 HGKFLDGRVIFVE 151
>AT3G52150.1 | chr3:19342074-19343090 FORWARD LENGTH=254
Length = 253
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 23 QEEYEAALQASVTVYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILY 82
Q E A + + VYVGN++ T+E LFS G++ + + GF F+ +
Sbjct: 166 QSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTF 225
Query: 83 YSREDAEDAVKYISGTMLDDRPIRVD 108
S ED E A+ ++ ++L+ + IRV+
Sbjct: 226 SSEEDVEAAIVALNNSLLEGQKIRVN 251
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,906,907
Number of extensions: 205739
Number of successful extensions: 906
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 932
Number of HSP's successfully gapped: 19
Length of query: 243
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 147
Effective length of database: 8,474,633
Effective search space: 1245771051
Effective search space used: 1245771051
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 110 (47.0 bits)