BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0605900 Os02g0605900|AK064754
(271 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54420.1 | chr3:20145935-20147034 FORWARD LENGTH=274 335 2e-92
AT2G43590.1 | chr2:18081592-18082749 REVERSE LENGTH=265 273 6e-74
AT2G43580.1 | chr2:18078817-18080013 REVERSE LENGTH=266 265 3e-71
AT2G43570.1 | chr2:18076389-18077435 REVERSE LENGTH=278 256 1e-68
AT2G43610.1 | chr2:18088058-18089184 REVERSE LENGTH=282 246 7e-66
AT2G43620.1 | chr2:18093954-18095025 REVERSE LENGTH=284 239 1e-63
AT1G56680.1 | chr1:21250428-21251417 REVERSE LENGTH=281 193 6e-50
AT3G12500.1 | chr3:3962501-3963984 REVERSE LENGTH=336 182 1e-46
AT2G43600.1 | chr2:18086049-18087018 REVERSE LENGTH=274 180 6e-46
AT3G47540.2 | chr3:17521044-17522467 FORWARD LENGTH=284 174 3e-44
AT4G01700.1 | chr4:732413-733487 REVERSE LENGTH=281 172 2e-43
AT1G02360.1 | chr1:472138-473116 REVERSE LENGTH=273 170 9e-43
AT1G05850.1 | chr1:1766833-1768117 REVERSE LENGTH=322 105 2e-23
AT3G16920.1 | chr3:5776663-5777886 REVERSE LENGTH=349 97 1e-20
>AT3G54420.1 | chr3:20145935-20147034 FORWARD LENGTH=274
Length = 273
Score = 335 bits (858), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/245 (65%), Positives = 183/245 (74%), Gaps = 3/245 (1%)
Query: 28 CGCASDQCCSKWGFCGTGSDYCGTGCQAGPCDVPA-TNDVSVASIVTPEFFAALVAQADD 86
CGC+S+ CCS++GFCG SDYCG GCQ GPC P N VSVA IVT EFF +++QA
Sbjct: 31 CGCSSELCCSQFGFCGNTSDYCGVGCQQGPCFAPPPANGVSVAEIVTQEFFNGIISQAAS 90
Query: 87 GCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIKFCYIEEIDGPS 146
CA FY+R AFL A Y FGR GS DDS+REIAAFFAH HET FCYIEEIDG S
Sbjct: 91 SCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREIAAFFAHVTHETGHFCYIEEIDGAS 150
Query: 147 KNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQ 206
K+YCDE +TQ+PC KGYYGRGP+Q+SWNFNYGPAG +IGFDGL P+ VA PV++F+
Sbjct: 151 KDYCDENATQYPCNPNKGYYGRGPIQLSWNFNYGPAGTAIGFDGLNAPETVATDPVISFK 210
Query: 207 TALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPG 266
TALWYWTN V V QGFGATIRAINGALECDG N V RV YY +C+Q GVDPG
Sbjct: 211 TALWYWTNRVQP--VISQGFGATIRAINGALECDGANTATVQARVRYYTDYCRQLGVDPG 268
Query: 267 SNLTC 271
+NLTC
Sbjct: 269 NNLTC 273
>AT2G43590.1 | chr2:18081592-18082749 REVERSE LENGTH=265
Length = 264
Score = 273 bits (698), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 133/245 (54%), Positives = 173/245 (70%), Gaps = 8/245 (3%)
Query: 28 CGCASDQCCSKWGFCGTGSDYCGTGCQAGPCDVPAT-NDVSVASIVTPEFFAALVAQADD 86
CGCA + CCS++G+CGT YCG GC++GPC T SV SIVT FF ++ QA +
Sbjct: 27 CGCAPNLCCSQFGYCGTDDAYCGVGCRSGPCRGSGTPTGGSVGSIVTQGFFNNIINQAGN 86
Query: 87 GCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIKFCYIEEIDGPS 146
GCA K FYTRD+F+ AA +P+F + ++REIA FAH HET FCYIEEI+G +
Sbjct: 87 GCAGKRFYTRDSFVNAANTFPNFANS----VTRREIATMFAHFTHETGHFCYIEEINGAT 142
Query: 147 KNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQ 206
+NYC ++TQ+PC GKGY+GRGP+Q+SWN+NYG GQS+G D L P+ V +P +AF+
Sbjct: 143 RNYCQSSNTQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLGLDLLRQPELVGSNPTVAFR 202
Query: 207 TALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPG 266
T LW+W N+V V QGFGATIRAING +EC+G N AV+ R+ YY+ +C Q GVDPG
Sbjct: 203 TGLWFWMNSVRP--VLNQGFGATIRAING-MECNGGNSGAVNARIGYYRDYCGQLGVDPG 259
Query: 267 SNLTC 271
NL+C
Sbjct: 260 PNLSC 264
>AT2G43580.1 | chr2:18078817-18080013 REVERSE LENGTH=266
Length = 265
Score = 265 bits (676), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 129/246 (52%), Positives = 171/246 (69%), Gaps = 9/246 (3%)
Query: 28 CGCASDQCCSKWGFCGTGSDYCGTGCQAGPCDV--PATNDVSVASIVTPEFFAALVAQAD 85
C CA + CCS++G+CGT +DYCG+ CQ+GPC V P T V +IVT FF ++ QA
Sbjct: 27 CDCAPNLCCSQFGYCGTTADYCGSTCQSGPCRVGGPPTGAGLVGNIVTQIFFNNIINQAG 86
Query: 86 DGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIKFCYIEEIDGP 145
+GCA K FYTRD+F+ A +PSF T ++REIA FAH +ET FCYIEEI+G
Sbjct: 87 NGCAGKSFYTRDSFINATNTFPSFANT----VTRREIATMFAHFTYETGHFCYIEEINGA 142
Query: 146 SKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAF 205
S+ CD+ + Q+PC K Y+GRGPL +SWNFNYG GQS+G D L P+ V+ +PV+AF
Sbjct: 143 SRVMCDQNNRQYPCAPAKSYHGRGPLLLSWNFNYGACGQSLGLDLLRQPELVSSNPVVAF 202
Query: 206 QTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDP 265
+TALW+W +V V QGFGATIRAI+G +CDG+N V+ R+ YY+ +C Q G+DP
Sbjct: 203 RTALWFWMKSVRP--VLNQGFGATIRAISG-FDCDGRNLGGVNARIGYYRDYCGQLGLDP 259
Query: 266 GSNLTC 271
G+N+TC
Sbjct: 260 GANITC 265
>AT2G43570.1 | chr2:18076389-18077435 REVERSE LENGTH=278
Length = 277
Score = 256 bits (653), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/252 (53%), Positives = 168/252 (66%), Gaps = 16/252 (6%)
Query: 28 CGCASDQCCSKWGFCGTGSDYCGTGCQAGPCDVPATND---VSVASIVTPEFFAALVAQA 84
CGCASD CCSK+G+CGT ++CG GCQAGPC VS+ VTP+FF +++ Q
Sbjct: 34 CGCASDFCCSKYGYCGTTDEFCGEGCQAGPCRSSGGGGDPAVSLEGTVTPDFFNSILNQR 93
Query: 85 DDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIKFCYIEEIDG 144
D C KGFYT D F+ AA YPSFG SKREIAAFFAH ET CYIEEIDG
Sbjct: 94 GD-CPGKGFYTHDTFMAAANSYPSFG----ASISKREIAAFFAHVAQETGFMCYIEEIDG 148
Query: 145 PSK----NYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARS 200
P+K YCD ++PC GKGYYGRG +Q+SWN+NYG G+++ + L P+ VA+
Sbjct: 149 PAKAASGEYCDTEKPEFPCAQGKGYYGRGAIQLSWNYNYGLCGKALDENLLASPEKVAQD 208
Query: 201 PVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTA-VSNRVAYYQQFCQ 259
VLAF+TA W+WT NV +F S GFGATIRA+N + EC G + TA +NR+ Y+Q +C
Sbjct: 209 QVLAFKTAFWFWTTNVRTSFKS--GFGATIRAVN-SRECSGGDSTAKAANRIKYFQDYCG 265
Query: 260 QFGVDPGSNLTC 271
+ GV PG NLTC
Sbjct: 266 KLGVAPGDNLTC 277
>AT2G43610.1 | chr2:18088058-18089184 REVERSE LENGTH=282
Length = 281
Score = 246 bits (629), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 127/257 (49%), Positives = 166/257 (64%), Gaps = 24/257 (9%)
Query: 29 GCASDQCCSKWGFCGTGSDYCGTGCQAGPCD--------------VPATNDVSVASIVTP 74
GC + CCS+WG+CGT YCGTGCQ+GPC+ + A ++AS++TP
Sbjct: 35 GCKGNMCCSRWGYCGTTKAYCGTGCQSGPCNSKPKPTPTPSGSGGLNAGPRGTIASVITP 94
Query: 75 EFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI 134
FF +++++ GC AKGFYTR AF+ AA + ++ G+V +KREIAA A +HE+
Sbjct: 95 AFFNSIMSKVGSGCPAKGFYTRQAFIAAAESFAAY--KGTV--AKREIAAMLAQFSHESG 150
Query: 135 KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDP 194
FCY EEI YC ST +PC GK YYGRGP+QI+WN+NYG AG+ +G L DP
Sbjct: 151 SFCYKEEIA--RGRYCSP-STTYPCQPGKNYYGRGPIQITWNYNYGAAGKFLGLPLLKDP 207
Query: 195 DAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYY 254
D VARSP +AFQ A+W+W NV V QGFGAT R ING EC+G P AV +RV +Y
Sbjct: 208 DMVARSPTVAFQCAMWFWNKNVRP--VLSQGFGATTRRINGG-ECNGGRPAAVQSRVNHY 264
Query: 255 QQFCQQFGVDPGSNLTC 271
FC++ GV PG+NL+C
Sbjct: 265 LDFCKKLGVTPGTNLSC 281
>AT2G43620.1 | chr2:18093954-18095025 REVERSE LENGTH=284
Length = 283
Score = 239 bits (610), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/259 (48%), Positives = 168/259 (64%), Gaps = 26/259 (10%)
Query: 29 GCASDQCCSKWGFCGTGSDYCGTGCQAGPCD-----VPATND-----------VSVASIV 72
GCA++ CCS++G+CGT YCGTGC++GPC +P T ++ ++V
Sbjct: 35 GCAANLCCSRYGYCGTTDAYCGTGCRSGPCSSSTTPIPPTPSGGAGGLNADPRDTIENVV 94
Query: 73 TPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHE 132
TP FF ++++ +GC AKGFYTR AF+ AA + ++ G+V +KREIAA A +HE
Sbjct: 95 TPAFFDGIMSKVGNGCPAKGFYTRQAFIAAAQSFDAY--KGTV--AKREIAAMLAQFSHE 150
Query: 133 TIKFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLG 192
+ FCY EEI YC ST +PC GK YYGRGP+QI+WN+NYG AG+ +G L
Sbjct: 151 SGSFCYKEEIA--RGKYCSP-STAYPCTPGKDYYGRGPIQITWNYNYGAAGKFLGLPLLT 207
Query: 193 DPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVA 252
DPD VARSP +AFQ A+W+W NV V QGFGAT R ING EC+G+ P AV +RV
Sbjct: 208 DPDMVARSPQVAFQCAMWFWNLNVRP--VLDQGFGATTRKINGG-ECNGRRPAAVQSRVN 264
Query: 253 YYQQFCQQFGVDPGSNLTC 271
YY +FC+ G+ PG+NL+C
Sbjct: 265 YYLEFCRTLGITPGANLSC 283
>AT1G56680.1 | chr1:21250428-21251417 REVERSE LENGTH=281
Length = 280
Score = 193 bits (491), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 109/251 (43%), Positives = 148/251 (58%), Gaps = 22/251 (8%)
Query: 33 DQCCSKWGFCGTGSDYCGTGCQAGPCDVPATNDV---------SVASIVTPEFFAALVAQ 83
++CCS G+CGT ++CG C +GPC + ++ + SIVTP F L+ +
Sbjct: 40 NECCSHTGYCGTNVEHCGFWCLSGPCQLSKSSSSYRLNDGPRGKIESIVTPALFHRLMRK 99
Query: 84 ADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIKFCYIEEID 143
C KGFYTR+AF+TA + G G+V +KREIAA A ++E+ FCY EE+
Sbjct: 100 VGSNCTGKGFYTREAFITAVKSFE--GYKGTV--AKREIAAILAQFSYESGNFCYKEEVT 155
Query: 144 GPSKNYCDETSTQWPCMAGKGYYGRGPLQ-ISWNFNYGPAGQSIGFDGLGDPDAVARSPV 202
S+ YC + T +PC +GK YYGRG LQ I WN YG AG+ +G L DPD VARSP
Sbjct: 156 --SETYCSSSKT-YPCQSGKKYYGRGLLQSIKWNEFYGEAGKYLGLPLLKDPDMVARSPE 212
Query: 203 LAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGK--NPTAVSNRVAYYQQFCQQ 260
+AF+ A+W+W V + GFGAT ING +EC G N A+ NR+ Y + C+
Sbjct: 213 VAFKFAMWFWKTEVGPSL--RLGFGATTMRING-IECGGMSWNAEAMQNRINQYLEICKW 269
Query: 261 FGVDPGSNLTC 271
FGV+PG +L C
Sbjct: 270 FGVNPGKDLYC 280
>AT3G12500.1 | chr3:3962501-3963984 REVERSE LENGTH=336
Length = 335
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 156/280 (55%), Gaps = 42/280 (15%)
Query: 30 CASDQCCSKWGFCGTGSDYCGT-GCQA----GPCDVPATNDVSVASIVTPEFFAALVAQA 84
C + CCS++G+CG YC GCQ+ G T D+S I + +F L +
Sbjct: 45 CPNGLCCSEFGWCGNTEPYCKQPGCQSQCTPGGTPPGPTGDLS-GIISSSQFDDMLKHRN 103
Query: 85 DDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIK--------- 135
D C A+GFYT +AF+TAA +P FG TG K+E+AAFF +HET
Sbjct: 104 DAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGP 163
Query: 136 ----FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGL 191
+C+ +E + P+ +YC+ ++T WPC +GK YYGRGP+Q+SWN+NYG G++IG D L
Sbjct: 164 YSWGYCFKQEQN-PASDYCEPSAT-WPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLL 221
Query: 192 GDPDAVARSPVLAFQTALWYWTN------NVHDAFVSGQ--------------GFGATIR 231
+PD VA V+AF+ A+W+W + H A ++GQ G+G
Sbjct: 222 NNPDLVANDAVIAFKAAIWFWMTAQPPKPSCH-AVIAGQWQPSDADRAAGRLPGYGVITN 280
Query: 232 AINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
ING LEC V++R+ +YQ++C FGV+PG NL C
Sbjct: 281 IINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDC 320
>AT2G43600.1 | chr2:18086049-18087018 REVERSE LENGTH=274
Length = 273
Score = 180 bits (457), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 146/252 (57%), Gaps = 25/252 (9%)
Query: 33 DQCCSKWGFCGTGSDYCGTGCQAGPCDVPATN-----------DVSVASIVTPEFFAALV 81
+CCS+WGFCGT +YCG C +GPC++ + + +++T F +++
Sbjct: 34 KECCSRWGFCGTKDEYCGFFCFSGPCNIKGKSYGYDYNVDAGPRGKIETVITSALFDSIM 93
Query: 82 AQADDGCAAKGFYTRDAFLTAAGGYPSFG-RTGSVDDSKREIAAFFAHANHETIKFCYIE 140
++ + C+AKGFYT +AF+TA + SFG G V +KREIAA AH ++ + FCY E
Sbjct: 94 SKVESNCSAKGFYTYEAFITA---FKSFGAYKGKV--AKREIAAILAHFSYGSKSFCYKE 148
Query: 141 EIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQ-ISWNFNYGPAGQSIGFDGLGDPDAVAR 199
EI ++ YC + S ++PC GK YYGRG LQ I+WN YG AG+ +G L DPD V+R
Sbjct: 149 EIS--NERYCSK-SKKYPCEPGKNYYGRGLLQSITWNEYYG-AGKHLGLPLLKDPDLVSR 204
Query: 200 SPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQ 259
SP +AF+ A+W+W NV A GFG + ++G EC N+V Y +FC+
Sbjct: 205 SPEVAFKFAMWFWNRNVRPALY--LGFGEITKRVDGR-ECGNWRRDDTKNKVKQYIEFCE 261
Query: 260 QFGVDPGSNLTC 271
GV P L C
Sbjct: 262 MLGVTPDQGLDC 273
>AT3G47540.2 | chr3:17521044-17522467 FORWARD LENGTH=284
Length = 283
Score = 174 bits (442), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/219 (44%), Positives = 128/219 (58%), Gaps = 23/219 (10%)
Query: 53 CQAGPCDVPATNDV--SVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFG 110
C GPC T SV+SIVT FF ++ QA +GC K F TRD+F+ AA +P+F
Sbjct: 13 CLVGPCIGAGTTSAAESVSSIVTQGFFNNIINQAGNGCTRKRFNTRDSFIDAANNFPNFA 72
Query: 111 RTGSVDDSKREIAAFFAHANHETIKFCYIEEIDGPSKNYCDETSTQWPCMA-GKGYYGRG 169
+ ++REIA+ FAH HET FCYIEEI S+ CDE Q PC + KG+ GRG
Sbjct: 73 SS----VTRREIASMFAHVTHETGHFCYIEEIKKRSRGRCDENVEQRPCPSQSKGHSGRG 128
Query: 170 PLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGAT 229
QS+G D L P+ V +P +AF+ L +W N+V V QGFGAT
Sbjct: 129 -------------HQSLGLDLLRQPELVGSNPTVAFRKGLSFWINSVRP--VLNQGFGAT 173
Query: 230 IRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSN 268
IRAING +EC+G N AV R+ YY+ +C+Q GVDP ++
Sbjct: 174 IRAING-MECNGGNSGAVKARIGYYRDYCRQLGVDPANH 211
>AT4G01700.1 | chr4:732413-733487 REVERSE LENGTH=281
Length = 280
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 128/237 (54%), Gaps = 34/237 (14%)
Query: 68 VASIVTPEFFAALVAQADD-GCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFF 126
+ S+V + + D+ C AKGFY +AF+ A +P FG G+ +RE+AAF
Sbjct: 38 IMSLVPRTLYDQIFIHKDNNACPAKGFYPYEAFVEATRSFPKFGSVGNFWTRRREVAAFL 97
Query: 127 AHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQI 173
A +HET C+ EE+ P NYCD ++ WPC++GK Y GRGP+Q+
Sbjct: 98 AQISHETTGGWATAPDGPYAWGLCFKEEVS-PQSNYCDASNKDWPCVSGKSYKGRGPIQL 156
Query: 174 SWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNV------HDAFVSGQ--- 224
SWN+NYG AG+++GFDGL +P+ VA + VLAF+TALW+W H+ V+
Sbjct: 157 SWNYNYGQAGRALGFDGLQNPELVANNSVLAFKTALWFWMTEQTPKPSCHNVMVNRYRPT 216
Query: 225 ----------GFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
G+G ING LEC V++RV Y+Q++ Q F V G NL C
Sbjct: 217 KADRAANRTVGYGLVTNIINGGLECGIPGDGRVTDRVGYFQRYAQLFKVTTGPNLDC 273
>AT1G02360.1 | chr1:472138-473116 REVERSE LENGTH=273
Length = 272
Score = 170 bits (430), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 127/242 (52%), Gaps = 34/242 (14%)
Query: 63 TNDVSVASIVTPEFFAALVAQADD-GCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKRE 121
T S+ +V + + + D+ C A GFYT ++F+ A +P FG GS + E
Sbjct: 25 TEATSIERLVPRDLYNKIFIHKDNTACPANGFYTYESFVQATRRFPRFGSVGSPVTQRLE 84
Query: 122 IAAFFAHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGR 168
+AAF A +HET C+ EE+ P YCD + TQWPC K Y GR
Sbjct: 85 VAAFLAQISHETTGGWATAPDGPYAWGLCFKEEVS-PQSTYCDSSDTQWPCFPNKTYQGR 143
Query: 169 GPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTN------NVHDAFVS 222
GP+Q+SWN+NYGPAG+++GFDGL +P+ V+ + V+AFQTALW+W + HD +
Sbjct: 144 GPIQLSWNYNYGPAGRALGFDGLRNPETVSNNSVIAFQTALWFWMTPQSPKPSCHDVMIG 203
Query: 223 GQ-------------GFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNL 269
GFG T ING LEC V++R+ ++Q++ F V G NL
Sbjct: 204 KYRPTAADLAANRTGGFGLTTNIINGGLECGIPGDGRVNDRIGFFQRYTGLFKVATGPNL 263
Query: 270 TC 271
C
Sbjct: 264 DC 265
>AT1G05850.1 | chr1:1766833-1768117 REVERSE LENGTH=322
Length = 321
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 43/237 (18%)
Query: 77 FAALVAQADDGCA-AKGFYTRDAFLTAAGGYPS--FGRTGSVDDSKREIAAFFAHANHET 133
F L ++ + A A GF+ +F+TAA + FG TG ++E+AAF H +T
Sbjct: 69 FEQLFSKRNTPIAHAVGFWDYQSFITAAALFEPLGFGTTGGKLMGQKEMAAFLGHVASKT 128
Query: 134 -------------IKFCYIEEIDGPSKNYCDET-STQWPCMAGKGYYGRGPLQISWNFNY 179
CY E+ P ++YCDE+ ++PC G YYGRG L I WNFNY
Sbjct: 129 SCGYGVATGGPLAWGLCYNREMS-PMQSYCDESWKFKYPCSPGAEYYGRGALPIYWNFNY 187
Query: 180 GPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNV-------HDAFV----------- 221
G AG+++ D L P+ + ++ LAFQ A+W W + HD FV
Sbjct: 188 GAAGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTL 247
Query: 222 --SGQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGV-----DPGSNLTC 271
G FG+T+ + G C + ++N +++Y F G+ P L+C
Sbjct: 248 SKRGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPNDELSC 304
>AT3G16920.1 | chr3:5776663-5777886 REVERSE LENGTH=349
Length = 348
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 106/238 (44%), Gaps = 44/238 (18%)
Query: 77 FAALVAQADDGCA-AKGFYTRDAFLTAAGGYPS--FGRTGSVDDSKREIAAFFAHANHET 133
F L ++ + A A GF+ +F+TAA Y FG G +E+AAF H +T
Sbjct: 92 FENLFSKRNSPVAHAVGFWDYRSFITAAAEYQPLGFGTAGEKLQGMKEVAAFLGHVGSKT 151
Query: 134 I-------------KFCYIEEIDGPSKNYCDET-STQWPCMAGKGYYGRGPLQISWNFNY 179
CY +E+ P + YCD+ +PC G Y+GRG L + WN+NY
Sbjct: 152 SCGYGVATGGPLAWGLCYNKEM-SPDQLYCDDYYKLTYPCTPGVSYHGRGALPVYWNYNY 210
Query: 180 GPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTN-------NVHDAFV----------- 221
G G+++ D L P+ + + LAFQ A+W W + HD FV
Sbjct: 211 GQTGEALKVDLLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTA 270
Query: 222 --SGQGFGATIRAINGALECD-GKNPTAVSNRVAYYQQFCQQFGV-----DPGSNLTC 271
GFGATI + G C+ G + ++N V++Y + GV P L+C
Sbjct: 271 AKRTPGFGATINVLYGDQICNSGFDNDEMNNIVSHYLYYLDLIGVGREEAGPHEKLSC 328
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,133,745
Number of extensions: 267583
Number of successful extensions: 512
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 463
Number of HSP's successfully gapped: 14
Length of query: 271
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 174
Effective length of database: 8,447,217
Effective search space: 1469815758
Effective search space used: 1469815758
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)