BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0601300 Os02g0601300|AK099086
(337 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G04120.1 | chr3:1081077-1083131 FORWARD LENGTH=339 580 e-166
AT1G13440.1 | chr1:4608465-4610494 REVERSE LENGTH=339 579 e-166
AT1G16300.1 | chr1:5574433-5577406 FORWARD LENGTH=421 482 e-136
AT1G79530.1 | chr1:29916232-29919088 REVERSE LENGTH=423 481 e-136
AT1G42970.1 | chr1:16127552-16129584 FORWARD LENGTH=448 268 2e-72
AT1G12900.1 | chr1:4392634-4394283 REVERSE LENGTH=400 243 1e-64
AT3G26650.1 | chr3:9795226-9796848 FORWARD LENGTH=397 243 1e-64
>AT3G04120.1 | chr3:1081077-1083131 FORWARD LENGTH=339
Length = 338
Score = 580 bits (1496), Expect = e-166, Method: Compositional matrix adjust.
Identities = 280/331 (84%), Positives = 301/331 (90%)
Query: 3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVK 62
KI+IGINGFGRIGRLVARV LQ +DVELVAVNDPFITTEYMTYMFKYD+VHGQWKH+E+K
Sbjct: 5 KIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHNELK 64
Query: 63 VKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXXVV 122
+KD KTL+FG K V VFG RNPE+IPWA AGA+YVVESTGVFT VV
Sbjct: 65 IKDEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGGAKKVV 124
Query: 123 ISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 182
ISAPSKDAPMFVVGVNE EYKSD++IVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVH+
Sbjct: 125 ISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS 184
Query: 183 ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242
ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPTVDV
Sbjct: 185 ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDV 244
Query: 243 SVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAKAG 302
SVVDLTVRLEK A+YD+IK AIKEE+EGKLKGILGY E+D+VSTDF GD+RSSIFDAKAG
Sbjct: 245 SVVDLTVRLEKAATYDEIKKAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAG 304
Query: 303 IALSDTFVKLVSWYDNEWGYSTRVIDLIRHM 333
IALSD FVKLVSWYDNEWGYS+RV+DLI HM
Sbjct: 305 IALSDKFVKLVSWYDNEWGYSSRVVDLIVHM 335
>AT1G13440.1 | chr1:4608465-4610494 REVERSE LENGTH=339
Length = 338
Score = 579 bits (1492), Expect = e-166, Method: Compositional matrix adjust.
Identities = 278/331 (83%), Positives = 300/331 (90%)
Query: 3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVK 62
KI+IGINGFGRIGRLVARV LQ +DVELVAVNDPFITTEYMTYMFKYD+VHGQWKHHE+K
Sbjct: 5 KIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHHELK 64
Query: 63 VKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXXVV 122
VKD KTL+FG K V VFG RNPE+IPW AGA++VVESTGVFT VV
Sbjct: 65 VKDDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKKVV 124
Query: 123 ISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 182
ISAPSKDAPMFVVGVNE EYKSD++IVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVH+
Sbjct: 125 ISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS 184
Query: 183 ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242
ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLP+LNGKLTGM+FRVPTVDV
Sbjct: 185 ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMSFRVPTVDV 244
Query: 243 SVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAKAG 302
SVVDLTVRLEK A+YD+IK AIKEE+EGK+KGILGY E+D+VSTDF GD+RSSIFDAKAG
Sbjct: 245 SVVDLTVRLEKAATYDEIKKAIKEESEGKMKGILGYTEDDVVSTDFVGDNRSSIFDAKAG 304
Query: 303 IALSDTFVKLVSWYDNEWGYSTRVIDLIRHM 333
IALSD FVKLVSWYDNEWGYS+RV+DLI HM
Sbjct: 305 IALSDKFVKLVSWYDNEWGYSSRVVDLIVHM 335
>AT1G16300.1 | chr1:5574433-5577406 FORWARD LENGTH=421
Length = 420
Score = 482 bits (1241), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/332 (71%), Positives = 265/332 (79%), Gaps = 1/332 (0%)
Query: 2 GKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEV 61
GK K+GINGFGRIGRLV R+A +D+E+VAVNDPFI +YM YMFKYD+ HG +K +
Sbjct: 83 GKTKVGINGFGRIGRLVLRIATFRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGNYKG-TI 141
Query: 62 KVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXXV 121
V D TL K+V V R+P EIPWA GAEYVVES+GVFT V
Sbjct: 142 NVIDDSTLEINGKQVKVVSKRDPAEIPWADLGAEYVVESSGVFTTVGQASSHLKGGAKKV 201
Query: 122 VISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVH 181
+ISAPS DAPMFVVGVNEK Y +++IVSNASCTTNCLAPLAKV+++ FGI+EGLMTTVH
Sbjct: 202 IISAPSADAPMFVVGVNEKTYLPNMDIVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVH 261
Query: 182 AITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVD 241
A TATQKTVDGPSMKDWRGGR AS NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +
Sbjct: 262 ATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPN 321
Query: 242 VSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAKA 301
VSVVDLT RLEK ASY+ +KAAIK +EG L+GILGY EED+VS DF GDSRSSIFDA A
Sbjct: 322 VSVVDLTCRLEKDASYEDVKAAIKFASEGPLRGILGYTEEDVVSNDFLGDSRSSIFDANA 381
Query: 302 GIALSDTFVKLVSWYDNEWGYSTRVIDLIRHM 333
GI LS +F+KLVSWYDNEWGYS RV+DLI HM
Sbjct: 382 GIGLSKSFMKLVSWYDNEWGYSNRVLDLIEHM 413
>AT1G79530.1 | chr1:29916232-29919088 REVERSE LENGTH=423
Length = 422
Score = 481 bits (1238), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 264/332 (79%), Gaps = 1/332 (0%)
Query: 2 GKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEV 61
GK K+GINGFGRIGRLV R+A +D+E+VAVNDPFI +YM YM KYD+ HG +K +
Sbjct: 85 GKTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMLKYDSTHGNFKG-SI 143
Query: 62 KVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXXV 121
V D TL K+V V R+P EIPWA GA+YVVES+GVFT V
Sbjct: 144 NVIDDSTLEINGKKVNVVSKRDPSEIPWADLGADYVVESSGVFTTLSKAASHLKGGAKKV 203
Query: 122 VISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVH 181
+ISAPS DAPMFVVGVNE Y+ +++IVSNASCTTNCLAPLAKV+++ FGI+EGLMTTVH
Sbjct: 204 IISAPSADAPMFVVGVNEHTYQPNMDIVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVH 263
Query: 182 AITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVD 241
A TATQKTVDGPSMKDWRGGR AS NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +
Sbjct: 264 ATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTSN 323
Query: 242 VSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAKA 301
VSVVDLT RLEK ASY+ +KAAIK +EG LKGILGY +ED+VS DF GDSRSSIFDA A
Sbjct: 324 VSVVDLTCRLEKGASYEDVKAAIKHASEGPLKGILGYTDEDVVSNDFVGDSRSSIFDANA 383
Query: 302 GIALSDTFVKLVSWYDNEWGYSTRVIDLIRHM 333
GI LS +FVKLVSWYDNEWGYS RV+DLI HM
Sbjct: 384 GIGLSKSFVKLVSWYDNEWGYSNRVLDLIEHM 415
>AT1G42970.1 | chr1:16127552-16129584 FORWARD LENGTH=448
Length = 447
Score = 268 bits (686), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 216/335 (64%), Gaps = 9/335 (2%)
Query: 1 MGKIKIGINGFGRIGRLVARVALQSED--VELVAVNDPFITTEYMTYMFKYDTVHGQWKH 58
+ K+K+ INGFGRIGR R +D +E+V +ND + +++ KYD++ G +K
Sbjct: 79 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSG-GVKNASHLLKYDSMLGTFKA 137
Query: 59 HEVKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXX 118
EVK+ D++T+ K + V R+P ++PWA G + V+E TGVF
Sbjct: 138 -EVKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 196
Query: 119 XXVVISAPSK--DAPMFVVGVNEKEYKSDV-NIVSNASCTTNCLAPLAKVINDRFGIVEG 175
V+I+AP+K D P +V+GVNE++Y DV NI+SNASCTTNCLAP AKV+++ FGIV+G
Sbjct: 197 SKVIITAPAKGADIPTYVMGVNEQDYGHDVANIISNASCTTNCLAPFAKVLDEEFGIVKG 256
Query: 176 LMTTVHAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAF 235
MTT H+ T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A
Sbjct: 257 TMTTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIAL 315
Query: 236 RVPTVDVSVVDLTVRLEKPA-SYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRS 294
RVPT +VSVVDL + +EK + + + A ++ A G +KGIL + LVS DF+ S
Sbjct: 316 RVPTPNVSVVDLVINVEKKGLTAEDVNEAFRKAANGPMKGILDVCDAPLVSVDFRCSDVS 375
Query: 295 SIFDAKAGIALSDTFVKLVSWYDNEWGYSTRVIDL 329
+ D+ + + D VK+V+WYDNEWGYS RV+DL
Sbjct: 376 TTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 410
>AT1G12900.1 | chr1:4392634-4394283 REVERSE LENGTH=400
Length = 399
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/330 (44%), Positives = 203/330 (61%), Gaps = 6/330 (1%)
Query: 3 KIKIGINGFGRIGRLVARVALQSED--VELVAVNDPFITTEYMTYMFKYDTVHGQWKHHE 60
KIK+ INGFGRIGR R +D +++V +ND + +++ KYD+ G + +
Sbjct: 64 KIKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSTLGIF-DAD 121
Query: 61 VKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXX 120
VK L K + + RNP +PW G + V+E TGVF
Sbjct: 122 VKPSGDSALSVDGKIIKIVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHLQAGAKK 181
Query: 121 VVISAPSK-DAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTT 179
V+I+AP K D P +VVGVN + Y + I+SNASCTTNCLAP KV++ +FGI++G MTT
Sbjct: 182 VLITAPGKGDIPTYVVGVNAELYSHEDTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTT 241
Query: 180 VHAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPT 239
H+ T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A RVPT
Sbjct: 242 THSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPT 300
Query: 240 VDVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDA 299
+VSVVDL V++ K +++ AA ++ AE +LKGIL +E LVS DF+ SS D+
Sbjct: 301 PNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKELKGILDVCDEPLVSVDFRCSDVSSTIDS 360
Query: 300 KAGIALSDTFVKLVSWYDNEWGYSTRVIDL 329
+ + D VK+++WYDNEWGYS RV+DL
Sbjct: 361 SLTMVMGDDMVKVIAWYDNEWGYSQRVVDL 390
>AT3G26650.1 | chr3:9795226-9796848 FORWARD LENGTH=397
Length = 396
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/330 (44%), Positives = 203/330 (61%), Gaps = 6/330 (1%)
Query: 3 KIKIGINGFGRIGRLVARVALQSED--VELVAVNDPFITTEYMTYMFKYDTVHGQWKHHE 60
K+K+ INGFGRIGR R +D ++++A+ND + +++ KYD+ G + +
Sbjct: 61 KLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIF-DAD 118
Query: 61 VKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXX 120
VK + K + V RNP +PW G + V+E TGVF
Sbjct: 119 VKPSGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKK 178
Query: 121 VVISAPSK-DAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTT 179
V+I+AP K D P +VVGVN Y D I+SNASCTTNCLAP KV++ +FGI++G MTT
Sbjct: 179 VIITAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTT 238
Query: 180 VHAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPT 239
H+ T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A RVPT
Sbjct: 239 THSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPT 297
Query: 240 VDVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDA 299
+VSVVDL V++ K +++ AA ++ AE +LKGIL +E LVS DF+ S+ D+
Sbjct: 298 PNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDS 357
Query: 300 KAGIALSDTFVKLVSWYDNEWGYSTRVIDL 329
+ + D VK+++WYDNEWGYS RV+DL
Sbjct: 358 SLTMVMGDDMVKVIAWYDNEWGYSQRVVDL 387
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,731,945
Number of extensions: 261865
Number of successful extensions: 645
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 632
Number of HSP's successfully gapped: 7
Length of query: 337
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 238
Effective length of database: 8,392,385
Effective search space: 1997387630
Effective search space used: 1997387630
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)