BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0586800 Os02g0586800|AK069595
         (319 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G14110.3  | chr3:4676222-4677602 REVERSE LENGTH=318            249   1e-66

>AT3G14110.3 | chr3:4676222-4677602 REVERSE LENGTH=318
          Length = 317

 Score =  249 bits (637), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 132/218 (60%), Positives = 161/218 (73%), Gaps = 3/218 (1%)

Query: 99  AVISTMSI-LAVPLEASASAETCQPANSMANMPIFXXXXXXXXXXXXXXXRQRKEELKRL 157
           AV+ T S+ +A PLEA A AE C+P +SM +MPI                RQRK EL+RL
Sbjct: 99  AVLLTNSLQMATPLEALA-AEICEPESSMFSMPILLLVALIGATVGGLLARQRKGELQRL 157

Query: 158 NTQLRQINTALRRQAQIESFAPGLTYAPVG-RATETEVIVDPRKQQLTVNLRNGKTFMRN 216
           N QLRQIN ALRRQA+IES+AP L+YAPVG R  ++E+IV+P+KQ+L   L+ GKTF+RN
Sbjct: 158 NEQLRQINAALRRQAKIESYAPSLSYAPVGARIPDSEIIVEPKKQELISKLKTGKTFLRN 217

Query: 217 QDLDMAVKEFRAALELAKSVGDRFEEKKAARGLGASLQRLGKYREAMNCYYKVLELSKET 276
           Q+ + A  EF+ ALELA+S+ D  EEKKAARGLGASLQR GKYREA+  +  VL +SK  
Sbjct: 218 QEPEKAYTEFKIALELAQSLKDPTEEKKAARGLGASLQRQGKYREAIQYHSMVLAISKRE 277

Query: 277 GEDSGCTEAYGAIADCYTELGDLERAAKLYDKYISRLQ 314
            EDSG TEAYGAIADCYTELGDLE+A K YD YI+RL+
Sbjct: 278 SEDSGITEAYGAIADCYTELGDLEKAGKFYDTYIARLE 315



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.316    0.131    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,624,909
Number of extensions: 193071
Number of successful extensions: 756
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 758
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 220
Effective length of database: 8,392,385
Effective search space: 1846324700
Effective search space used: 1846324700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)