BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0580500 Os02g0580500|AK108467
(282 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G40770.1 | chr5:16315589-16316621 REVERSE LENGTH=278 400 e-112
AT3G27280.2 | chr3:10076904-10078051 FORWARD LENGTH=280 394 e-110
AT5G14300.1 | chr5:4613102-4614023 FORWARD LENGTH=250 311 3e-85
AT4G28510.1 | chr4:14084970-14086372 REVERSE LENGTH=289 266 1e-71
AT1G03860.1 | chr1:979611-981157 REVERSE LENGTH=287 264 5e-71
AT5G44140.1 | chr5:17762491-17763629 FORWARD LENGTH=279 261 3e-70
AT2G20530.1 | chr2:8842300-8843787 FORWARD LENGTH=287 260 6e-70
>AT5G40770.1 | chr5:16315589-16316621 REVERSE LENGTH=278
Length = 277
Score = 400 bits (1029), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/277 (71%), Positives = 230/277 (83%), Gaps = 2/277 (0%)
Query: 3 GGGQAAASLLTKXXXXXXXXXXXXXXXXXXXYTVDGGQRAVIFDRFRGVLPETSSEGTHF 62
G QAA S L+ +TVDGG+RAVIFDRFRGV+ +T EGTHF
Sbjct: 2 GSQQAAVSFLSNLAKAAFGLGTAATVLNTSLFTVDGGERAVIFDRFRGVMDQTVGEGTHF 61
Query: 63 IVPWLQKPFIFDIRTRPHSFSSTSGTKDLQMVSLTLRVLARPDIDRLPDIFTSLGLEYDE 122
++P LQ+P IFDIRT+PH+FSS SGTKDLQMV+LTLRVL+RP++ RLP IF +LGLEYDE
Sbjct: 62 LIPILQRPHIFDIRTKPHTFSSISGTKDLQMVNLTLRVLSRPEVSRLPYIFQTLGLEYDE 121
Query: 123 KVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRDSLIRRAAEFNIVLDDVAITHLAYG 182
KVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVR+SLI RA +FNIVLDDVAITHL+YG
Sbjct: 122 KVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLITRAKDFNIVLDDVAITHLSYG 181
Query: 183 PEFSQAVEKKQVAQQEAERSRFLVARAEQERRAAIVRAEGESEAARLISEATAAAGTGLI 242
EFS+AVE+KQVAQQEAERS+F+V +A+QERRAA++RAEGESEAA+LIS+ATA AG GLI
Sbjct: 182 VEFSRAVEQKQVAQQEAERSKFVVMKADQERRAAVIRAEGESEAAQLISDATAKAGMGLI 241
Query: 243 ELRRIEAAKEIAGELARSPNVSYIPAGDSSQMLLGLS 279
ELRRIEA++EIA LARSPNV+Y+P G S ML L+
Sbjct: 242 ELRRIEASREIASTLARSPNVAYLPGGQS--MLFALN 276
>AT3G27280.2 | chr3:10076904-10078051 FORWARD LENGTH=280
Length = 279
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/280 (69%), Positives = 226/280 (80%), Gaps = 2/280 (0%)
Query: 3 GGGQAAASLLTKXXXXXXXXXXXXXXXXXXXYTVDGGQRAVIFDRFRGVLPETSSEGTHF 62
G Q A S LT YTVDGG+RAV+FDRFRGVL +T EGTHF
Sbjct: 2 GSQQVAISFLTNLAKAAFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQTVGEGTHF 61
Query: 63 IVPWLQKPFIFDIRTRPHSFSSTSGTKDLQMVSLTLRVLARPDIDRLPDIFTSLGLEYDE 122
++P+LQ P I+DIRT+PH+FSS SGTKDLQMV+LTLRVL RP++ RLP IF +LGLEYDE
Sbjct: 62 LIPYLQTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDE 121
Query: 123 KVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRDSLIRRAAEFNIVLDDVAITHLAYG 182
KVLPSIGNEVLKAVVA FNADQLLTERP VSALVRD+LI+RA EFNI LDD+AITHL+YG
Sbjct: 122 KVLPSIGNEVLKAVVANFNADQLLTERPQVSALVRDALIKRAREFNIELDDIAITHLSYG 181
Query: 183 PEFSQAVEKKQVAQQEAERSRFLVARAEQERRAAIVRAEGESEAARLISEATAAAGTGLI 242
EFS+AVE KQVAQQEAERS+F+V +A+QERRAA++RAEGESEAA+LIS+ATA AG GLI
Sbjct: 182 AEFSRAVEAKQVAQQEAERSKFVVMKADQERRAAVIRAEGESEAAQLISDATAKAGMGLI 241
Query: 243 ELRRIEAAKEIAGELARSPNVSYIPAGDSSQMLLGLSGAR 282
ELRRIEA++E+A LARSPNV+Y+P G S ML L+ R
Sbjct: 242 ELRRIEASREVAATLARSPNVAYLPGGQS--MLFNLNPGR 279
>AT5G14300.1 | chr5:4613102-4614023 FORWARD LENGTH=250
Length = 249
Score = 311 bits (796), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 154/247 (62%), Positives = 192/247 (77%), Gaps = 28/247 (11%)
Query: 34 YTVDGGQRAVIFDRFRGVLPETSSEGTHFIVPWLQKPFIFDIRTRPHSFSSTSGTKDLQM 93
+TVDGGQRAV+F RF G+L E EGTH +PW+QKP+IFDIRT+P+ ++ SGTKDLQM
Sbjct: 25 FTVDGGQRAVMFHRFEGILEEPVGEGTHRKIPWVQKPYIFDIRTKPYKINTDSGTKDLQM 84
Query: 94 VSLTLRVLARPDIDRLPDIFTSLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVS 153
V+LTLRV+ RPD V+KAVVAQFNAD+LLTERP VS
Sbjct: 85 VNLTLRVMFRPD--------------------------VVKAVVAQFNADELLTERPQVS 118
Query: 154 ALVRDSLIRRAAEFNIVLDDVAITHLAYGPEFSQAVEKKQVAQQEAERSRFLVARAEQER 213
AL+R++LI+RA EFNIVLDDV+IT L+YG EFS AVE+KQVAQQEAERS+F+VA+A+QER
Sbjct: 119 ALIRETLIKRAKEFNIVLDDVSITGLSYGKEFSLAVERKQVAQQEAERSKFVVAKADQER 178
Query: 214 RAAIVRAEGESEAARLISEATAAAGTGLIELRRIEAAKEIAGELARSPNVSYIPAGDSSQ 273
RAA++RAEGESEAAR+IS+ATA AG GLI+LRR+EAA+E+A L+ SPNV Y+P+G
Sbjct: 179 RAAVIRAEGESEAARVISKATAGAGMGLIKLRRVEAAREVAITLSNSPNVVYLPSG--GN 236
Query: 274 MLLGLSG 280
ML ++G
Sbjct: 237 MLFAMNG 243
>AT4G28510.1 | chr4:14084970-14086372 REVERSE LENGTH=289
Length = 288
Score = 266 bits (679), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 125/232 (53%), Positives = 173/232 (74%), Gaps = 1/232 (0%)
Query: 34 YTVDGGQRAVIFDRFRGVLPETSSEGTHFIVPWLQKPFIFDIRTRPHSFSSTSGTKDLQM 93
Y V+GG RA++F+R G+ + EGTH ++PW ++P I+D+R RP+ STSG++DLQM
Sbjct: 37 YNVEGGHRAIMFNRLVGIKDKVYPEGTHLMIPWFERPVIYDVRARPYLVESTSGSRDLQM 96
Query: 94 VSLTLRVLARPDIDRLPDIFTSLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVS 153
V + LRVL RP D+LP+I+ SLG Y E+VLPSI NE LKAVVAQ+NA QL+T+R VS
Sbjct: 97 VKIGLRVLTRPMADQLPEIYRSLGENYSERVLPSIINETLKAVVAQYNASQLITQREAVS 156
Query: 154 ALVRDSLIRRAAEFNIVLDDVAITHLAYGPEFSQAVEKKQVAQQEAERSRFLVARAEQER 213
+R L RAA FN+ LDDV+IT+L +G EF+ A+E KQVA QEAER++F+V +AEQ++
Sbjct: 157 REIRKILTERAANFNVALDDVSITNLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDK 216
Query: 214 RAAIVRAEGESEAARLISEATAAAGTGLIELRRIEAAKEIAGELARSPNVSY 265
R+A++RA+GE+++A+LI +A A I LR+IEAA+EIA +A S N Y
Sbjct: 217 RSAVIRAQGEAKSAQLIGQAI-ANNQAFITLRKIEAAREIAQTIANSANKVY 267
>AT1G03860.1 | chr1:979611-981157 REVERSE LENGTH=287
Length = 286
Score = 264 bits (674), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 127/232 (54%), Positives = 172/232 (74%), Gaps = 1/232 (0%)
Query: 34 YTVDGGQRAVIFDRFRGVLPETSSEGTHFIVPWLQKPFIFDIRTRPHSFSSTSGTKDLQM 93
Y VDGG RAV+F+R G+ + EGTHF+VPW ++P I+D+R RP+ ST+G+ DLQM
Sbjct: 37 YNVDGGHRAVMFNRLTGIKEKVYPEGTHFMVPWFERPIIYDVRARPYLVESTTGSHDLQM 96
Query: 94 VSLTLRVLARPDIDRLPDIFTSLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVS 153
V + LRVL RP DRLP I+ +LG Y E+VLPSI +E LKAVVAQ+NA QL+T+R VS
Sbjct: 97 VKIGLRVLTRPMGDRLPQIYRTLGENYSERVLPSIIHETLKAVVAQYNASQLITQREAVS 156
Query: 154 ALVRDSLIRRAAEFNIVLDDVAITHLAYGPEFSQAVEKKQVAQQEAERSRFLVARAEQER 213
+R L RA+ F+I LDDV+IT L +G EF+ A+E KQVA QEAER++F+V +AEQ+R
Sbjct: 157 REIRKILTERASNFDIALDDVSITTLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDR 216
Query: 214 RAAIVRAEGESEAARLISEATAAAGTGLIELRRIEAAKEIAGELARSPNVSY 265
R+A++RA+GE+++A+LI +A A I LR+IEAA+EIA +A+S N Y
Sbjct: 217 RSAVIRAQGEAKSAQLIGQAI-ANNQAFITLRKIEAAREIAQTIAQSANKVY 267
>AT5G44140.1 | chr5:17762491-17763629 FORWARD LENGTH=279
Length = 278
Score = 261 bits (668), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/237 (52%), Positives = 177/237 (74%), Gaps = 1/237 (0%)
Query: 34 YTVDGGQRAVIFDRFRGVLPETSSEGTHFIVPWLQKPFIFDIRTRPHSFSSTSGTKDLQM 93
Y VDGG RA++F+RF G+ EGTHF +P ++ I+D+R+RP+ +S +G+ DLQ
Sbjct: 37 YNVDGGHRAIVFNRFTGIKDRVYPEGTHFKIPLFERAIIYDVRSRPYVENSQTGSNDLQT 96
Query: 94 VSLTLRVLARPDIDRLPDIFTSLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVS 153
V++ LRVL RP DRLP+I+ +LG Y E+VLPSI NE LKAVVAQ+NA L+T+R VS
Sbjct: 97 VTIGLRVLTRPMGDRLPEIYRTLGQNYGERVLPSIINETLKAVVAQYNASHLITQREAVS 156
Query: 154 ALVRDSLIRRAAEFNIVLDDVAITHLAYGPEFSQAVEKKQVAQQEAERSRFLVARAEQER 213
+R + RAA+FNI LDDV+IT+L +G EF++A+EKKQVA QEAER++F+V +AEQ++
Sbjct: 157 REIRKIVTERAAKFNIALDDVSITNLKFGKEFTEAIEKKQVAAQEAERAKFIVEKAEQDK 216
Query: 214 RAAIVRAEGESEAARLISEATAAAGTGLIELRRIEAAKEIAGELARSPNVSYIPAGD 270
++AI+RA+GE+++A+LI +A A I LR+IEAA+EIA +A+S N Y+ + D
Sbjct: 217 KSAIIRAQGEAKSAQLIGQAI-ANNEAFITLRKIEAAREIAQTIAKSANKVYLNSSD 272
>AT2G20530.1 | chr2:8842300-8843787 FORWARD LENGTH=287
Length = 286
Score = 260 bits (664), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 123/232 (53%), Positives = 173/232 (74%), Gaps = 1/232 (0%)
Query: 34 YTVDGGQRAVIFDRFRGVLPETSSEGTHFIVPWLQKPFIFDIRTRPHSFSSTSGTKDLQM 93
Y VDGG RA++F+R G+ + EGTH ++PW ++P I+D+R +P+ STSG++DLQM
Sbjct: 35 YNVDGGHRAIVFNRLVGIKDKVYPEGTHLMIPWFERPIIYDVRAKPYLVESTSGSRDLQM 94
Query: 94 VSLTLRVLARPDIDRLPDIFTSLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVS 153
V + LRVL RP D+LP+++ SLG Y E+VLPSI +E LKAVVAQ+NA QL+T+R VS
Sbjct: 95 VKIGLRVLTRPMADQLPEVYRSLGENYRERVLPSIIHETLKAVVAQYNASQLITQRESVS 154
Query: 154 ALVRDSLIRRAAEFNIVLDDVAITHLAYGPEFSQAVEKKQVAQQEAERSRFLVARAEQER 213
+R L RAA F+I LDDV+IT L +G EF+ A+E KQVA QEAER++F+V +AEQ++
Sbjct: 155 REIRKILTLRAANFHIALDDVSITGLTFGKEFTAAIEGKQVAAQEAERAKFIVEKAEQDK 214
Query: 214 RAAIVRAEGESEAARLISEATAAAGTGLIELRRIEAAKEIAGELARSPNVSY 265
R+A++RAEGE+++A+LI +A A + LR+IEAA+EIA ++RS N Y
Sbjct: 215 RSAVIRAEGEAKSAQLIGQAI-ANNQAFLTLRKIEAAREIAQTISRSANKVY 265
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,862,156
Number of extensions: 173550
Number of successful extensions: 568
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 564
Number of HSP's successfully gapped: 7
Length of query: 282
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 185
Effective length of database: 8,447,217
Effective search space: 1562735145
Effective search space used: 1562735145
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)