BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0580400 Os02g0580400|AK103053
         (199 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G23220.1  | chr1:8242614-8244136 FORWARD LENGTH=130            141   2e-34
AT5G20110.1  | chr5:6791542-6793253 REVERSE LENGTH=210            119   8e-28
AT3G16120.1  | chr3:5465035-5465395 FORWARD LENGTH=94              83   1e-16
AT4G15930.1  | chr4:9036344-9037825 FORWARD LENGTH=124             82   2e-16
AT4G27360.1  | chr4:13694032-13694517 FORWARD LENGTH=104           78   2e-15

>AT1G23220.1 | chr1:8242614-8244136 FORWARD LENGTH=130
          Length = 129

 Score =  141 bits (356), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 65/92 (70%), Positives = 76/92 (82%), Gaps = 1/92 (1%)

Query: 105 SVRVRAADMPLAMQRRAVRLAFDAVAAMP-RLDSKRLALALKKEFDATYGPAWHCIVGTG 163
           +VRVRA+DMPL  Q RA  L+ + + A P + D+KRLA ALKK+FD+ YGPAWHCIVGT 
Sbjct: 35  NVRVRASDMPLPQQNRAFSLSREILNATPGKADNKRLAHALKKDFDSAYGPAWHCIVGTS 94

Query: 164 FGSYVTHSVGGFLYFSVDKVYVLLFRTAVEPL 195
           FGSYVTHS GGFLYF +DKVYVLLF+TAVEPL
Sbjct: 95  FGSYVTHSTGGFLYFQIDKVYVLLFKTAVEPL 126



>AT5G20110.1 | chr5:6791542-6793253 REVERSE LENGTH=210
          Length = 209

 Score =  119 bits (299), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 53/90 (58%), Positives = 66/90 (73%)

Query: 105 SVRVRAADMPLAMQRRAVRLAFDAVAAMPRLDSKRLALALKKEFDATYGPAWHCIVGTGF 164
           +VR+ AADMP  MQ  A R A   + ++ +  SK +A  LKKEFD  YGPAWHCIVG+ F
Sbjct: 116 TVRILAADMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSF 175

Query: 165 GSYVTHSVGGFLYFSVDKVYVLLFRTAVEP 194
           GS+VTHS G F+YFS+DK+YVLLF+T V P
Sbjct: 176 GSFVTHSTGCFIYFSMDKLYVLLFKTKVRP 205



>AT3G16120.1 | chr3:5465035-5465395 FORWARD LENGTH=94
          Length = 93

 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 107 RVRAADMPLAMQRRAVRLAFDAVAAMPRLDSKRLALALKKEFDATYGPAWHCIVGTGFGS 166
           +V   DMP+ MQ +A+++A  ++      DS  +A  +KKEFD  YG  W C+VGT FG 
Sbjct: 7   KVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVVGTNFGC 66

Query: 167 YVTHSVGGFLYFSVDKVYVLLFRTAV 192
           + THS G F+YF +  +  L+F+ A 
Sbjct: 67  FFTHSKGTFIYFHLGTLNFLIFKGAT 92



>AT4G15930.1 | chr4:9036344-9037825 FORWARD LENGTH=124
          Length = 123

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 2/84 (2%)

Query: 108 VRAADMPLAMQRRAVRLAFDAVAAMPRLDSKRLALALKKEFDATYGPAWHCIVGTGFGSY 167
           +++ADM   MQ+ A+ +A  A         K +A  +KKEFD  +G  WHCIVG  FGSY
Sbjct: 42  IKSADMKDDMQKEAIEIAISAFEKYSV--EKDIAENIKKEFDKKHGATWHCIVGRNFGSY 99

Query: 168 VTHSVGGFLYFSVDKVYVLLFRTA 191
           VTH    F+YF +D+  VLLF++ 
Sbjct: 100 VTHETNHFVYFYLDQKAVLLFKSG 123



>AT4G27360.1 | chr4:13694032-13694517 FORWARD LENGTH=104
          Length = 103

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 111 ADMPLAMQRRAVRLAFDAVAAMPRLDSKRLALALKKEFDATYGPAWHCIVGTGFGSYVTH 170
            DM   M+  A+ LA  A+      +  ++A  +KKEFD +YG  W CIVGT FGS+VTH
Sbjct: 11  TDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIVGTHFGSFVTH 70

Query: 171 SVGGFLYFSVDKVYVLLFRTAV-EP 194
             G F++FSV  + +LLF+ +V EP
Sbjct: 71  CSGCFIHFSVGSLTILLFKGSVGEP 95



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.324    0.136    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,447,302
Number of extensions: 73646
Number of successful extensions: 170
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 168
Number of HSP's successfully gapped: 5
Length of query: 199
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 106
Effective length of database: 8,556,881
Effective search space: 907029386
Effective search space used: 907029386
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 109 (46.6 bits)