BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0579800 Os02g0579800|AK059931
(162 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G14870.1 | chr1:5128591-5129458 REVERSE LENGTH=153 186 6e-48
AT5G35525.1 | chr5:13707084-13707818 FORWARD LENGTH=153 179 6e-46
AT1G14880.1 | chr1:5132791-5133663 REVERSE LENGTH=152 166 7e-42
AT3G18460.1 | chr3:6333048-6333948 REVERSE LENGTH=185 147 2e-36
AT1G68610.1 | chr1:25763623-25764105 FORWARD LENGTH=161 147 2e-36
AT3G18470.1 | chr3:6335000-6335698 REVERSE LENGTH=134 143 5e-35
AT1G49030.1 | chr1:18136794-18137846 FORWARD LENGTH=225 142 6e-35
AT1G58320.1 | chr1:21634123-21635303 REVERSE LENGTH=149 133 4e-32
AT3G18450.1 | chr3:6331229-6332118 REVERSE LENGTH=185 133 4e-32
AT1G68630.1 | chr1:25768653-25769458 FORWARD LENGTH=162 119 7e-28
AT1G52200.1 | chr1:19442271-19443407 REVERSE LENGTH=191 109 6e-25
AT2G40935.1 | chr2:17083199-17084216 FORWARD LENGTH=191 88 2e-18
AT2G45010.1 | chr2:18568045-18569615 FORWARD LENGTH=245 56 8e-09
>AT1G14870.1 | chr1:5128591-5129458 REVERSE LENGTH=153
Length = 152
Score = 186 bits (471), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 107/137 (78%), Gaps = 1/137 (0%)
Query: 27 WSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTGCNCVY 86
WSTG +CF DC NCC+T CPCITFGQ+AEI+DRGS+SCGT+GALYAL+ ++TGC C+Y
Sbjct: 16 WSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCACIY 75
Query: 87 SCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHANMERQGH 146
SCFYR KMR+QY ++ C DC HF CE C+L+Q+YRELK RG+DM+LGW N+ERQ +
Sbjct: 76 SCFYRGKMRAQYNIKGDDCTDCLKHFCCELCSLTQQYRELKHRGYDMSLGWAGNVERQQN 135
Query: 147 KPAMTMPPHMFP-GMTR 162
+ + M +F GMTR
Sbjct: 136 QGGVAMGAPVFQGGMTR 152
>AT5G35525.1 | chr5:13707084-13707818 FORWARD LENGTH=153
Length = 152
Score = 179 bits (454), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 104/137 (75%), Gaps = 1/137 (0%)
Query: 27 WSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTGCNCVY 86
WSTG +CF DC NCC+T LCPCITFGQ+A+I+DRG++SCGT+GALY L+ +TGC C+Y
Sbjct: 16 WSTGFCDCFSDCQNCCITWLCPCITFGQVADIVDRGNTSCGTAGALYVLLAAITGCGCLY 75
Query: 87 SCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHANMERQGH 146
SC YR K+R+QY ++ C DC HF CE CAL+QEYRELK RGFDM+LGW N+E+Q +
Sbjct: 76 SCIYRGKIRAQYNIRGDGCTDCLKHFCCELCALTQEYRELKHRGFDMSLGWAGNVEKQQN 135
Query: 147 KPAMTM-PPHMFPGMTR 162
+ + M P GM+R
Sbjct: 136 QGGVAMGAPAFQGGMSR 152
>AT1G14880.1 | chr1:5132791-5133663 REVERSE LENGTH=152
Length = 151
Score = 166 bits (419), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 97/137 (70%), Gaps = 1/137 (0%)
Query: 27 WSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTGCNCVY 86
WSTG +CF DC NCC+T CPCITFGQ+AEI+DRGS SC +GALY L+ L+T C +Y
Sbjct: 15 WSTGFCDCFSDCRNCCITLCCPCITFGQVAEIVDRGSKSCCAAGALYMLIDLITSCGRMY 74
Query: 87 SCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHANMERQGH 146
+CFY KMR+QY ++ C DC HF C CAL+Q+YRELK RGFDM+LGW N E+Q +
Sbjct: 75 ACFYSGKMRAQYNIKGDGCTDCLKHFCCNLCALTQQYRELKHRGFDMSLGWAGNAEKQQN 134
Query: 147 KPAMTM-PPHMFPGMTR 162
+ + M P GMTR
Sbjct: 135 QGGVAMGAPAFQGGMTR 151
>AT3G18460.1 | chr3:6333048-6333948 REVERSE LENGTH=185
Length = 184
Score = 147 bits (372), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 86/127 (67%), Gaps = 3/127 (2%)
Query: 27 WSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTGCNCVY 86
WS+ LF+C +D N +TCL PC+T GQIAEI+D G++ C T G LY ++ + G VY
Sbjct: 54 WSSDLFDCMNDSENAVITCLAPCVTLGQIAEIVDEGATPCATGGLLYGMIFFI-GVPFVY 112
Query: 87 SCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHANMERQGH 146
SC +RAKMR++YGL + P D H FCE CAL QEYRELK RGFD N+GW N+ Q
Sbjct: 113 SCMFRAKMRNKYGLPDAPAPDWITHLFCEHCALCQEYRELKHRGFDPNIGWAGNV--QAQ 170
Query: 147 KPAMTMP 153
+P M+ P
Sbjct: 171 QPVMSPP 177
>AT1G68610.1 | chr1:25763623-25764105 FORWARD LENGTH=161
Length = 160
Score = 147 bits (371), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 105/149 (70%), Gaps = 6/149 (4%)
Query: 19 QGKVPLAAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVML 78
QG++ WST L C+ D +CC+TC CPC+ FG+IAE++DRGS+SCG SGA+Y ++ +
Sbjct: 11 QGRIKAKDWSTDLCECWMDINSCCLTCWCPCVAFGRIAEVVDRGSTSCGVSGAMYMIIFM 70
Query: 79 LTGC--NCVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELK-KRGFDMNL 135
LTG + +YSCFYR K+R+QY L+E+PC DC VHF CEPCAL QEYR+L+ R D+ +
Sbjct: 71 LTGYGGSSLYSCFYRTKLRAQYNLKERPCCDCCVHFCCEPCALCQEYRQLQHNRDLDLVI 130
Query: 136 GWHANMERQGHKPAMT--MPPHMFPGMTR 162
GWH NMER A T PP P M+R
Sbjct: 131 GWHGNMERHARLAASTPSAPPLQAP-MSR 158
>AT3G18470.1 | chr3:6335000-6335698 REVERSE LENGTH=134
Length = 133
Score = 143 bits (360), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 84/122 (68%)
Query: 27 WSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTGCNCVY 86
W++GLF+C +D C+TC CPC+TFG+IA+I D G + CG G Y L+ + G C++
Sbjct: 5 WTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGLICCVVGLPCLF 64
Query: 87 SCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHANMERQGH 146
SC YR K+RS++GL E P +DC HFFCE CAL QE+RELK RG D ++GW NM+R
Sbjct: 65 SCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTRGLDPSIGWSGNMQRTMA 124
Query: 147 KP 148
P
Sbjct: 125 PP 126
>AT1G49030.1 | chr1:18136794-18137846 FORWARD LENGTH=225
Length = 224
Score = 142 bits (359), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 90/132 (68%), Gaps = 2/132 (1%)
Query: 25 AAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTGCNC 84
+ W++GLF+C +D N +TC P +TFGQIAE+ID G++SCGT+G LY L+ L C
Sbjct: 86 SNWTSGLFDCMNDGENALITCCFPFVTFGQIAEVIDEGATSCGTAGMLYGLICCLFAIPC 145
Query: 85 VYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHANMERQ 144
VY+C +R K+RS+YGL + P D H FCE CAL QEYRELK RG D ++GW N+++Q
Sbjct: 146 VYTCTFRTKLRSKYGLPDAPAPDWITHCFCEYCALCQEYRELKNRGLDPSIGWIGNVQKQ 205
Query: 145 --GHKPAMTMPP 154
G + M PP
Sbjct: 206 RMGQQQEMMAPP 217
>AT1G58320.1 | chr1:21634123-21635303 REVERSE LENGTH=149
Length = 148
Score = 133 bits (334), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 91/145 (62%), Gaps = 6/145 (4%)
Query: 19 QGKVPLAAWSTGLFNCF-DDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVM 77
+ KV W+TGL++C +D CC T +CPC+ FG+IAEI+D+G +S G +G L + M
Sbjct: 9 EKKVTEGQWTTGLYDCLSEDISTCCFTWVCPCVAFGRIAEILDKGETSRGLAG-LMVVAM 67
Query: 78 LLTGCNCVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGW 137
GC Y+ YRAK+R QY L E PCAD +H FC PCAL+QE+RELK RG D +LGW
Sbjct: 68 SSIGCGWYYASKYRAKLRHQYALPEAPCADGAIHCFCCPCALTQEHRELKHRGLDPSLGW 127
Query: 138 HANMERQGHKPAMTMPPHMFPGMTR 162
N+E G PP + GM R
Sbjct: 128 --NIENGGLNS--NTPPFVASGMDR 148
>AT3G18450.1 | chr3:6331229-6332118 REVERSE LENGTH=185
Length = 184
Score = 133 bits (334), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 88/150 (58%), Gaps = 5/150 (3%)
Query: 4 KPEDVGGGVTTAFAMQGKVPLAAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGS 63
KP ++ G+ + WS+ LF+C +D N +T + PC+TFGQIAEI+D G+
Sbjct: 33 KPANIPTGIPVNYQQTQN----QWSSQLFDCMNDSENAVITLIAPCVTFGQIAEIVDEGA 88
Query: 64 SSCGTSGALYALVMLLTGCNCVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEY 123
+ C T+G LY + TG + VYS +RA++R ++GL + P D H C P AL QEY
Sbjct: 89 TPCATAGLLYG-ALFFTGASFVYSYMFRARIRKKFGLPDAPAPDWITHLVCMPFALCQEY 147
Query: 124 RELKKRGFDMNLGWHANMERQGHKPAMTMP 153
RELK GFD LGW N+++ + MT P
Sbjct: 148 RELKHHGFDPILGWAGNVQQAQQQEMMTPP 177
>AT1G68630.1 | chr1:25768653-25769458 FORWARD LENGTH=162
Length = 161
Score = 119 bits (298), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Query: 21 KVPLAAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLT 80
++P W+TGL +C +D C T + PC++F Q EI++RG+ C +G ++ L +
Sbjct: 23 QLPQGLWTTGLCDCHEDAHICVQTAIMPCVSFAQNVEIVNRGTIPCMNAGLIH-LALGFI 81
Query: 81 GCNCVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHAN 140
GC+ +Y+ R+++R + L E+PC D VH FC PCA+ QE RELK RG D ++GW +N
Sbjct: 82 GCSWLYAFPNRSRLREHFALPEEPCRDFLVHLFCTPCAICQESRELKNRGADPSIGWLSN 141
Query: 141 MERQGHKPAMTMPPHMFPGMTR 162
+E+ + PP + PGM R
Sbjct: 142 VEKWSRE--KVTPPIVVPGMIR 161
>AT1G52200.1 | chr1:19442271-19443407 REVERSE LENGTH=191
Length = 190
Score = 109 bits (273), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 68/112 (60%)
Query: 27 WSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTGCNCVY 86
WSTGLF+C D N +T + PC+TFGQIAE++D G +C +Y L+M + V
Sbjct: 53 WSTGLFDCQADQANAVLTTIVPCVTFGQIAEVMDEGEMTCPLGTFMYLLMMPALCSHWVM 112
Query: 87 SCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWH 138
YR KMR ++ L E P +DC H C C+L QEYRELK R D +LGW+
Sbjct: 113 GSKYREKMRRKFNLVEAPYSDCASHVLCPCCSLCQEYRELKIRNLDPSLGWN 164
>AT2G40935.1 | chr2:17083199-17084216 FORWARD LENGTH=191
Length = 190
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 21/146 (14%)
Query: 3 SKPEDVGGGVTTAFAMQGKVPLAAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRG 62
++ E + A + K WS+G+ CFDD +CCV CPC FG+ AE++ G
Sbjct: 23 TEVETTTPNLEIAVSESTKDDPRQWSSGICACFDDMQSCCVGLFCPCYIFGKNAELLGSG 82
Query: 63 S------SSC------------GTSGALYALVMLLTGCNCVYSCFYRAKMRSQYGLQEKP 104
+ + C T+GAL L C Y+C YR +R++Y LQE P
Sbjct: 83 TFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSC---YACGYRKSLRAKYNLQEAP 139
Query: 105 CADCPVHFFCEPCALSQEYRELKKRG 130
C D HFFC CA+ QEYRE++++
Sbjct: 140 CGDFVTHFFCHLCAICQEYREIREQS 165
>AT2G45010.1 | chr2:18568045-18569615 FORWARD LENGTH=245
Length = 244
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 31/146 (21%)
Query: 27 WSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRG---------SSSCGTSG-ALYALV 76
W+TG+F C +D +C CPC+ FG+ E + + C G AL A+
Sbjct: 62 WTTGIFGCAEDPESCRTGLFCPCVLFGRNIEAVREEIPWTQPCVCHAVCVEGGMALAAVT 121
Query: 77 MLLTG--------------------CNCVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEP 116
L +G C +YS +R +++ +Y L+ PC C VH
Sbjct: 122 ALFSGYIDPQTTVVICEGLFFAWWMCG-IYSGLFRQELQKKYHLKNAPCDHCMVHCCLHW 180
Query: 117 CALSQEYRELKKRGFDMNLGWHANME 142
CAL QE+RE+K D M+
Sbjct: 181 CALCQEHREMKNHLSDTEASSSTTMD 206
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.327 0.139 0.484
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,905,596
Number of extensions: 152045
Number of successful extensions: 501
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 493
Number of HSP's successfully gapped: 14
Length of query: 162
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 71
Effective length of database: 8,611,713
Effective search space: 611431623
Effective search space used: 611431623
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 107 (45.8 bits)