BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0575200 Os02g0575200|AK069567
         (321 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12350.1  | chr1:4198870-4200633 FORWARD LENGTH=318            367   e-102
AT5G02080.1  | chr5:409811-411557 FORWARD LENGTH=271              328   3e-90

>AT1G12350.1 | chr1:4198870-4200633 FORWARD LENGTH=318
          Length = 317

 Score =  367 bits (943), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 185/307 (60%), Positives = 230/307 (74%), Gaps = 5/307 (1%)

Query: 5   EENPESFFAAAPPLRDADAVAARLGEFIARNSSXXXXXXXXRRIVCVTSGGTTVPLEQRC 64
           E+   SFF ++PPL++ + + A L +FI  NSS        RRIVCVTSGGTTVPLEQRC
Sbjct: 9   EDEISSFFESSPPLKNKEEIVANLNQFIELNSSCQGGM---RRIVCVTSGGTTVPLEQRC 65

Query: 65  VRYIDNFSSGHRGAASTEYFLKAGYAVIFLHRRGSCQPYCRFLPDDSFLKFFDVDAESKV 124
           VRYIDNFSSG+RGAASTE F+KAGYAVIFL+RRG+CQPYCR+LPDD FL+ F+      +
Sbjct: 66  VRYIDNFSSGNRGAASTENFVKAGYAVIFLYRRGTCQPYCRYLPDDPFLECFEFPDAKNI 125

Query: 125 QVAECHAPVVKKAIGDYCKAIEGGYLLKLPFTTIFEYLQLLKMVATSISSAGPLGMFYLA 184
           QV   H+  VK A+ D   A+  G LLKLPF+TI+EYLQ+L+++AT +   GP  MFYLA
Sbjct: 126 QVHGSHSGAVKMAVMDQQAAVAEGRLLKLPFSTIYEYLQMLRLIATILKDVGPCSMFYLA 185

Query: 185 AAVSDFYVPWDSMAKHKIQSGGGPLDMRLSQVPKMLSVLRNQWAPLAFCISFKLETDSDI 244
           AAVSDFYVPW SM +HKI+SG GPLD+RL+QVPKMLS+LR+ WAP AFCISFKLETDS I
Sbjct: 186 AAVSDFYVPWLSMTEHKIESGSGPLDIRLAQVPKMLSILRSNWAPKAFCISFKLETDSKI 245

Query: 245 LIQKADMALNKYKMNIVVANLLATYKEEVIIVTDKERSTIRK-MNKDEDL-EMQIIKILS 302
           L++KA  AL KYK++ VVAN L T KEEV++V+      +R+  NK E + E  +I++L 
Sbjct: 246 LLEKATKALQKYKVHAVVANELLTRKEEVVVVSSSGNVVVRRDSNKPESIVEDNLIRLLV 305

Query: 303 QNHSKYI 309
             HS YI
Sbjct: 306 DRHSTYI 312



>AT5G02080.1 | chr5:409811-411557 FORWARD LENGTH=271
          Length = 270

 Score =  328 bits (840), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 171/295 (57%), Positives = 211/295 (71%), Gaps = 28/295 (9%)

Query: 22  DAVAARLGEFIARNSSXXXXXXXXRRIVCVTSGGTTVPLEQRCVRYIDNFSSGHRGAAST 81
           + +   L EFI  NSS        RRIVCVTSGGTTVPLEQRCVRYIDNFSSG+RGAAST
Sbjct: 2   EEILENLNEFIKLNSSSQGG----RRIVCVTSGGTTVPLEQRCVRYIDNFSSGNRGAAST 57

Query: 82  EYFLKAGYAVIFLHRRGSCQPYCRFLPDDSFLKFFDVDAESKVQVAECHAPVVKKAIGDY 141
           E F+KAGYAVIFL+RRG+CQPYCR LPDD FL+ F+   ++ +Q                
Sbjct: 58  ENFVKAGYAVIFLYRRGTCQPYCRSLPDDPFLECFEFSDKTNIQ---------------- 101

Query: 142 CKAIEGGYLLKLPFTTIFEYLQLLKMVATSISSAGPLGMFYLAAAVSDFYVPWDSMAKHK 201
                 G LLKLPF+TI+EYLQ+L+++A ++   GP  MFYLAAAVSDFYVPW SM +HK
Sbjct: 102 ------GSLLKLPFSTIYEYLQMLRLIAEALKDVGPCSMFYLAAAVSDFYVPWKSMTEHK 155

Query: 202 IQSGGGPLDMRLSQVPKMLSVLRNQWAPLAFCISFKLETDSDILIQKADMALNKYKMNIV 261
           I+SG GPLD+RL+QVPKMLSVLR+ WAP AFCISFKLETDS IL++KA  AL KYK++ V
Sbjct: 156 IESGSGPLDIRLAQVPKMLSVLRSNWAPKAFCISFKLETDSKILMEKATKALRKYKVHAV 215

Query: 262 VANLLATYKEEVIIVTDKERSTIRK-MNKDED-LEMQIIKILSQNHSKYICGSTN 314
           VAN L+T KEEV++V+      +R+  +K E  +E  +I+++   HS YI  S N
Sbjct: 216 VANELSTRKEEVVVVSSSGNVVVRRECDKPESFVEDNLIRLIVDRHSTYIKESHN 270



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.136    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,440,962
Number of extensions: 241942
Number of successful extensions: 582
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 580
Number of HSP's successfully gapped: 2
Length of query: 321
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 222
Effective length of database: 8,392,385
Effective search space: 1863109470
Effective search space used: 1863109470
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)