BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0573200 Os02g0573200|AK064910
(718 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G08920.1 | chr4:5724260-5726905 FORWARD LENGTH=682 835 0.0
AT1G04400.2 | chr1:1185719-1187901 REVERSE LENGTH=613 629 e-180
AT3G15620.1 | chr3:5293475-5296548 REVERSE LENGTH=557 169 5e-42
AT5G24850.1 | chr5:8535399-8538016 REVERSE LENGTH=527 117 2e-26
AT2G47590.1 | chr2:19521888-19523732 FORWARD LENGTH=448 51 2e-06
>AT4G08920.1 | chr4:5724260-5726905 FORWARD LENGTH=682
Length = 681
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/706 (63%), Positives = 530/706 (75%), Gaps = 57/706 (8%)
Query: 21 VVWFRRDLRVEDNPXXXXXXXXXGEVVPVYVWAPEEDGPYYPGRVSRWWLSQSLKHLDAS 80
+VWFRRDLRVEDNP G V+ ++VWAPEE+G Y+PGRVSRWWL SL LD+S
Sbjct: 15 IVWFRRDLRVEDNPALAAAVRA-GPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQLDSS 73
Query: 81 LRRLGASRLVTRRSADAVVALIELVRSIGATHLFFNHLYDPLSLVRDHRVKALLTAEGIA 140
LR LG L+T+RS D+V +L+++V+S GA+ +FFNHLYDPLSLVRDHR K +LTA+GIA
Sbjct: 74 LRSLGTC-LITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQGIA 132
Query: 141 VQSFNADLLYEPWEVVDDDGCPFTMFAPFWDRCLCMP-DPAAPLLPPKRIAPGELPARRC 199
V+SFNADLLYEPWEV D+ G PF+MFA FW+RCL MP DP +PLLPPK+I G++ +C
Sbjct: 133 VRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKIISGDV--SKC 190
Query: 200 PSDELVFEDESERGSNALLARAWSPGWQNADKALAAFLNGPLMDYSVNRKKADSASTSLL 259
+D LVFED+SE+GSNALLARAWSPGW N DKAL F+NGPL++YS NR+KADSA+TS L
Sbjct: 191 VADPLVFEDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTSFL 250
Query: 260 SPYLHFGELSVRKVFHQVRMKQLMWSNEGNHAGDESCVLFLRSIGLREYSRYLTFNHPCS 319
SP+LHFGE+SVRKVFH VR+KQ+ W+NEGN AG+ES LFL+SIGLREYSRY++FNHP S
Sbjct: 251 SPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHPYS 310
Query: 320 LEKPLLAHLRFFPWVVDEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV 379
E+PLL HL+FFPW VDE YFK WRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV
Sbjct: 311 HERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV 370
Query: 380 KVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQLEGYKFDPHG 439
KVLQLPWRWGMKYFWDTLLDADLESDALGWQYI+G+LPD RE DRIDNPQ EGYKFDP+G
Sbjct: 371 KVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNG 430
Query: 440 EYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDAAKTRLQDALSE 499
EYVRRWLPEL+RLPT+WIHHPW+APESVLQAAGIELGSNYPLPIV LD AK RL +ALS+
Sbjct: 431 EYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEALSQ 490
Query: 500 MWELEAASRAAMENGMEEGLGDSSDV--PPIAFPPELQMEVDRAPAQPTVHGPTTAGRRR 557
MW+LEAASRAA+ENG EEGLGDS++V PI FP ++ ME +PT P RR
Sbjct: 491 MWQLEAASRAAIENGSEEGLGDSAEVEEAPIEFPRDITME----ETEPTRLNPN---RRY 543
Query: 558 EDQMVPSMTSSLVRAE--TELSADFDNSM-DSRPEVPSQVL--FQPRMEREETVDXXXXX 612
EDQMVPS+TSSL+R E E S + NS+ DSR EVP ++ Q + R E
Sbjct: 544 EDQMVPSITSSLIRPEEDEESSLNLRNSVGDSRAEVPRNMVNTNQAQQRRAEPASNQVTA 603
Query: 613 XXXXXXXXXXXXXXXXXXXXNFQTTIHRARGVAPSTSEASS-----NWTGREGGVVPVWS 667
R VA ST ++++ R GG+VP WS
Sbjct: 604 MIPE----------------------FNIRIVAESTEDSTAESSSSGRRERSGGIVPEWS 641
Query: 668 PPAASGPSDHYAADEADI----TSRSYLDRHPQSHTLMNWSQLSQS 709
P G S+ + ++E I T+ SYL H H ++NW +LSQ+
Sbjct: 642 P----GYSEQFPSEENGIGGGSTTSSYLQNH---HEILNWRRLSQT 680
>AT1G04400.2 | chr1:1185719-1187901 REVERSE LENGTH=613
Length = 612
Score = 629 bits (1621), Expect = e-180, Method: Compositional matrix adjust.
Identities = 300/495 (60%), Positives = 364/495 (73%), Gaps = 5/495 (1%)
Query: 19 RTVVWFRRDLRVEDNPXXXXXXXXXGEVVPVYVWAPEEDGPYYPGRVSRWWLSQSLKHLD 78
+T+VWFRRDLR+EDNP G V PV++W PEE+G +YPGR SRWW+ QSL HL
Sbjct: 6 KTIVWFRRDLRIEDNPALAAAAHE-GSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLS 64
Query: 79 ASLRRLGASRLVTRRSADAVVALIELVRSIGATHLFFNHLYDPLSLVRDHRVKALLTAEG 138
SL+ LG S L ++ + + A+++ +R GAT + FNHLYDP+SLVRDH VK L G
Sbjct: 65 QSLKALG-SDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLVERG 123
Query: 139 IAVQSFNADLLYEPWEVVDDDGCPFTMFAPFWDRCLCMPDPAAPLLPPKRIAPGELPARR 198
I+VQS+N DLLYEPWE+ + G PFT F +W +CL M + L PP R+ P A
Sbjct: 124 ISVQSYNGDLLYEPWEIYCEKGKPFTSFNSYWKKCLDMSIESVMLPPPWRLMPITAAAEA 183
Query: 199 ---CPSDELVFEDESERGSNALLARAWSPGWQNADKALAAFLNGPLMDYSVNRKKADSAS 255
C +EL E+E+E+ SNALL RAWSPGW NADK L F+ L+DY+ N KK S
Sbjct: 184 IWACSIEELGLENEAEKPSNALLTRAWSPGWSNADKLLNEFIEKQLIDYAKNSKKVVGNS 243
Query: 256 TSLLSPYLHFGELSVRKVFHQVRMKQLMWSNEGNHAGDESCVLFLRSIGLREYSRYLTFN 315
TSLLSPYLHFGE+SVR VF RMKQ++W+ + N G+ES LFLR IGLREYSRY+ FN
Sbjct: 244 TSLLSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEESADLFLRGIGLREYSRYICFN 303
Query: 316 HPCSLEKPLLAHLRFFPWVVDEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS 375
P + E+ LL+HLRFFPW D FK WRQGRTGYPLVDAGMRELWATGW+H+RIRV+VS
Sbjct: 304 FPFTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVS 363
Query: 376 SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQLEGYKF 435
SF VK L LPW+WGMKYFWDTLLDADLE D LGWQYISGS+PDG ELDR+DNP L+G K+
Sbjct: 364 SFAVKFLLLPWKWGMKYFWDTLLDADLECDILGWQYISGSIPDGHELDRLDNPALQGAKY 423
Query: 436 DPHGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDAAKTRLQD 495
DP GEY+R+WLPELARLPTEWIHHPWDAP +VL+A+G+ELG+NY PIV++D A+ L
Sbjct: 424 DPEGEYIRQWLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARELLAK 483
Query: 496 ALSEMWELEAASRAA 510
A+S E + AA
Sbjct: 484 AISRTREAQIMIGAA 498
>AT3G15620.1 | chr3:5293475-5296548 REVERSE LENGTH=557
Length = 556
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 152/526 (28%), Positives = 236/526 (44%), Gaps = 42/526 (7%)
Query: 20 TVVWFRRDLRVEDNPXXXXXXXXXGEVVPVYVWAPE--EDGP--YYPGR----VSRW-WL 70
+++WFR+ LRV DNP + PV+V P E P + PG V+R +L
Sbjct: 26 SLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESDPSAFSPGSSRAGVNRIRFL 85
Query: 71 SQSLKHLDASLRRLGASRLVTRRSADAVVALIELVRSIGATHLFFNHLYDPLSLVRDHRV 130
+SLK LD+SL++LG+ LV + V L+ ++ L F + DP D +V
Sbjct: 86 LESLKDLDSSLKKLGSRLLVFKGEPGEV--LVRCLQEWKVKRLCFEYDTDPYYQALDVKV 143
Query: 131 KALLTAEGIAVQSFNADLLYEPWEVVDDDG----CPFTMFAPFWDRCLCMPDP---AAPL 183
K ++ G+ V S + L+ P +++ +G + F C +
Sbjct: 144 KDYASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFLKVAGEPSCAKSELVMSYSS 203
Query: 184 LPPKRIAPGELPARRCPS-DELVFEDESE------RGSNALLARAWSPGWQNADKALAAF 236
LPP G L PS +EL ++D+ + RG + + + +DKA A
Sbjct: 204 LPPIGDI-GNLGISEVPSLEELGYKDDEQADWTPFRGGESEALKRLTKSI--SDKAWVAN 260
Query: 237 LNGPLMDYSVNRKKADSASTSLLSPYLHFGELSVRKVFHQVRMKQLMWSNEGNHAGDESC 296
P D S K A T+++SPYL FG LS R + + Q ++ + H
Sbjct: 261 FEKPKGDPSAFLKPA----TTVMSPYLKFGCLSSRYFYQCL---QNIYKDVKKHTSPP-- 311
Query: 297 VLFLRSIGLREYSRYLTFNHPCSLEKPLLAHLRFFPWVVDEVYFKVWRQGRTGYPLVDAG 356
V L + RE+ F P + + PW D WR G+TGYP +DA
Sbjct: 312 VSLLGQLLWREFFYTTAFGTPNFDKMKGNRICKQIPWNEDHAMLAAWRDGKTGYPWIDAI 371
Query: 357 MRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGS 415
M +L GW+H R V+ F + L + W G F L+D+D + W ++S S
Sbjct: 372 MVQLLKWGWMHHLARHCVACFLTRGDLFIHWEQGRDVFERLLIDSDWAINNGNWMWLSCS 431
Query: 416 LPDGRELDRIDNPQLEGYKFDPHGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIEL 475
+ +RI +P G K+DP G+Y+R +LP L +P ++I+ PW AP SV A +
Sbjct: 432 -SFFYQFNRIYSPISFGKKYDPDGKYIRHFLPVLKDMPKQYIYEPWTAPLSVQTKANCIV 490
Query: 476 GSNYPLPIVELDAAKTRLQDALSEMWELEAASRAAMENGMEEGLGD 521
G +YP P+V D+A + + E + L ++ EE L D
Sbjct: 491 GKDYPKPMVLHDSASKECKRKMGEAYALNKKMDGKVD---EENLRD 533
>AT5G24850.1 | chr5:8535399-8538016 REVERSE LENGTH=527
Length = 526
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 189/465 (40%), Gaps = 48/465 (10%)
Query: 20 TVVWFRRDLRVEDNPXXXXXXXXXGEVVPVYVWAPEEDGPYY------PGRVSRWWLSQS 73
T++WFR DLRV DN ++PVY P + G + +L +
Sbjct: 43 TILWFRNDLRVLDNDALYKAWSSSDTILPVYCLDPRLFHTTHFFNFPKTGALRGGFLMEC 102
Query: 74 LKHLDASLRRLGASRLVTRRSADAVVALIELVRSIGATHLFFNHLYDPLSLVRDHRVKAL 133
L L +L + G + L+ RS L L + GA +F + + + V
Sbjct: 103 LVDLRKNLMKRGLNLLI--RSGKPEEILPSLAKDFGARTVFAHKETCSEEVDVERLVNQG 160
Query: 134 LTAEGIAVQSFNADLLYEPWEVVDDDGCPFTMF------APFWDRCLCMPDPAAPLLPPK 187
L G S +L++ DD PF +F F + P
Sbjct: 161 LKRVG---NSTKLELIWGSTMYHKDD-LPFDVFDLPDVYTQFRKSVEAKCSIRSSTRIPL 216
Query: 188 RIAP-------GELPARR---CPSDELVFEDESERGSNALLARAWSPGWQ-NADKALAAF 236
+ P G++P E+ G +A + R + W+ + K
Sbjct: 217 SLGPTPSVDDWGDVPTLEKLGVEPQEVTRGMRFVGGESAGVGRVFEYFWKKDLLKVYKET 276
Query: 237 LNGPLM-DYSVNRKKADSASTSLLSPYLHFGELSVRKVFHQVRMKQLMWSNEGNHAGDES 295
NG L DYS SP+L FG +S R ++ +V+ E + S
Sbjct: 277 RNGMLGPDYSTK-----------FSPWLAFGCISPRFIYEEVQ------RYEKERVANNS 319
Query: 296 CVLFLRSIGLREYSRYLTFNHPCSLEKPLLAHLRFFPWVVDEVYFKVWRQGRTGYPLVDA 355
L + R+Y R+L+ SL W D+ F+ WR +TGYPL+DA
Sbjct: 320 TYWVLFELIWRDYFRFLSIKCGNSLFHLGGPRNVQGKWSQDQKLFESWRDAKTGYPLIDA 379
Query: 356 GMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGS 415
M+EL TG++ +R R +V SF V+ + L WR G ++F LLD D S+ W Y +G
Sbjct: 380 NMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGV 439
Query: 416 LPDGRELDRIDNPQLEGYKFDPHGEYVRRWLPELARLPTEWIHHP 460
D RE DR + + +DP GEYV WL +L RLP E H P
Sbjct: 440 GNDPRE-DRYFSIPKQAQNYDPEGEYVAFWLQQLRRLPKEKRHWP 483
>AT2G47590.1 | chr2:19521888-19523732 FORWARD LENGTH=448
Length = 447
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 23 WFRRDLRVEDNPXXXXXXXXXGEVVPVYVWAPEEDGPYYPGR-----VSRWWLSQSLKHL 77
WFR DLRV DN V+PVY + P + G G +L +S+ L
Sbjct: 120 WFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIESVSEL 179
Query: 78 DASLRRLGASRLVTRRSADAVVALIELVRSIGATHLFFNHLYDPLSLVRDHRVKALLTAE 137
+L+ G++ +V +AV L+EL + IGA ++ + + + +++ + E
Sbjct: 180 RKNLQARGSNLVVRVGKPEAV--LVELAKEIGADAVYAHREVSHDEVKAEGKIETAMKEE 237
Query: 138 GIAVQSFNADLLYE----PWEVVD 157
G+ V+ F LY P+++ D
Sbjct: 238 GVEVKYFWGSTLYHLDDLPFKIED 261
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,655,201
Number of extensions: 670853
Number of successful extensions: 1503
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1487
Number of HSP's successfully gapped: 5
Length of query: 718
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 612
Effective length of database: 8,200,473
Effective search space: 5018689476
Effective search space used: 5018689476
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)