BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0556700 Os02g0556700|AK073875
(1166 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G22930.1 | chr1:8117521-8121854 FORWARD LENGTH=1132 758 0.0
AT4G09150.2 | chr4:5828753-5833475 FORWARD LENGTH=1099 393 e-109
>AT1G22930.1 | chr1:8117521-8121854 FORWARD LENGTH=1132
Length = 1131
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/1144 (39%), Positives = 667/1144 (58%), Gaps = 94/1144 (8%)
Query: 55 TAEEIEAKLRDADLRRQQFHEALSCKARCTVRYPSCPSQEEDPKKRLEAKLVAAEQKRLS 114
+ ++IE KL A LRRQQF+ +S KAR R PS S EE +R+EA+L+AAEQKRL
Sbjct: 47 SVQDIEDKLLHAHLRRQQFYHNVSRKARAKPRSPSRSSDEE-LGQRIEARLLAAEQKRLE 105
Query: 115 LLAKEQSRLAKLDELRQAAKNDAELRFKKEREELGMKVESRVRQAEEKRTQLMHARSQRR 174
+LAK Q RLAKLDELRQAAK E+R ++ER +LG +VESRV++AE R +++ A Q+R
Sbjct: 106 ILAKAQMRLAKLDELRQAAKTSVEIRSERERVKLGTQVESRVQKAEANRMKILKASHQKR 165
Query: 175 AALEERTTKYLVQRVAWENKYRERVHSAILQKRTAAEKRRTGLLEGEKRRAQGRFSQVQL 234
A +ERT++ +++R+A E+KY+ERV ++I QKR AAEK+R GLLE EK++A+ R QV+
Sbjct: 166 ACAKERTSQSMMRRMARESKYKERVRASINQKRVAAEKKRLGLLEAEKKKARARVQQVRH 225
Query: 235 AARTLSCQREADRSKLKEQLEDKLQRAKRQRAEYLKQR---GSTHSFTYTASVKHGDFLS 291
A ++S QRE +RSK++++LEDKLQRAKR R+E+L+QR + S + D LS
Sbjct: 226 VANSVSNQREIERSKMRDKLEDKLQRAKRYRSEFLRQRRRQRDSISLYCDMMQEDADLLS 285
Query: 292 RNLARCWRRFITSRKTTVVLARAFDMLRINEESVKPMPFEKLALCIESPTVLQTTRAFLD 351
R L+RCWR F+ ++TT+ LA+A+D L+INE +PFE+LA+ +ES L+T ++ LD
Sbjct: 286 RKLSRCWRCFVRQKRTTLDLAKAYDGLKINES----LPFEQLAMLLESLNTLKTVKSLLD 341
Query: 352 RLESRF----TLXXXXXXXXXENIDHLLKHLGSPKRTLSKSGGRTR----VTPTKAARNS 403
RLE R + +NIDHLLK + +P+R + S R+R V+ + +
Sbjct: 342 RLEIRLEASKNVTTVSQPSILDNIDHLLKRVATPRRKATPSTLRSRKGKKVSSVRNVAGT 401
Query: 404 DVSKLPRYSPRIVLCAYMILGHPSVVFNERGEREKLLVESAENFVKEFELLIKTILDGSS 463
V K+ RY R+VL A+MILGHP VFN +G++E L +A+ FV+E +LLI I +G
Sbjct: 402 SV-KMSRYPVRVVLSAFMILGHPDAVFNGQGDQEAALNNAAKGFVRELKLLINVIQEG-- 458
Query: 464 GACILKQPILDDLSPGSSNYQESSAVVADRKKFRSQLASFDKAWCAYLYHFVVWKAKDAK 523
P+ +S G S + + RSQL FDKAWC++L FV+WK KDA+
Sbjct: 459 -------PV--QVSGGESKH----------RTLRSQLDLFDKAWCSFLNSFVIWKVKDAR 499
Query: 524 SLEEDLVRAACKLELSMMQTCKFTAEGQPENLNDNLKAIQKEVMVDQTLLREKVRHLGGE 583
LE+DLVRAAC+LELSM+Q CK T EG L + KAIQ +V DQ LL EKVRHL G
Sbjct: 500 LLEDDLVRAACQLELSMIQKCKLTPEGVDTMLTHDKKAIQMQVTQDQELLTEKVRHLSGV 559
Query: 584 AGIERMEVALSEARTKFFEAKGNRSPLATTIKNV----AATCSSGESPISDMKENSNIND 639
AG+ERME AL E RTK+F+AK + SP+A + + A+ S + +I
Sbjct: 560 AGVERMESALLETRTKYFQAKEDGSPMANQLAHFFSPSPASSPVQSVSSSSSRSKDSIGV 619
Query: 640 KRPSQAVQSMFRVPSSPSESNTAGITMSNPMTVSSTLSEKRPTENEQMVNEILH-GFLA- 697
+ ++ +S+ + + PS S P VS+ ++ +NE MVNE LH G L
Sbjct: 620 EGSNRVNRSLLKDDTPPS---------SGPSRVSNGTVDEVSNQNELMVNEFLHDGNLNF 670
Query: 698 DSSSNIGTVEGGFKEKVRETMEKAFWDVVVDSLRGDMPDYSYLVQLVKEVRDTLYEMVPK 757
S + E K +++ETME+AFWD V++S++ + PDYS + L+KEV D L +MVP
Sbjct: 671 PGGSTVKDEEDNLKRRIKETMERAFWDNVMESMKLEKPDYSCISNLMKEVSDELCQMVPD 730
Query: 758 GWKXXXXXXXXXXXXXQVLESGTQDMQYLGQILQYSLGMLRKLSSPAKEDEMKRSHDKLL 817
WK Q+L SGT D+ YLG++L+++L LRKLS+PA + E + +H LL
Sbjct: 731 SWKVEITETIDLDILSQLLNSGTLDIDYLGKMLEFALATLRKLSAPANDRENESTHRDLL 790
Query: 818 GELTEHSECNNSGSNSFVIAVIKGLRFTMEELKALKTEVSRARIQLLEPIIKGSGGVEYL 877
EL E + N +A++KG+RF +E+++ LK E+ RI +++P ++G G +YL
Sbjct: 791 KELHRLCEAEDESGNFRAVAIVKGIRFILEQIQELKREIGIGRIAIMKPFLQGPAGFDYL 850
Query: 878 QKAFADRYGFPSNASVALRSTAQWISTSKDTVEVEWNEHAQPFVA---TLRSGHGV---- 930
KAF RYG P+ A +L T +WIST + E EW EH A RS G+
Sbjct: 851 TKAFEKRYGPPTQAYESLPVTRRWISTLLSSKE-EWEEHNNTLSALNVVERSSMGISLKT 909
Query: 931 ------PDQRQSTIPVSDDTG-LPECTGQRLDQLIRIGLLQLISGIEGVQMQSVTETFKL 983
P S V D G L EC G+R+D +R+GLL+L++ + G+ + + ETF+L
Sbjct: 910 GGSFLSPVNTTSKSTVMDTAGQLSECKGERVDLAVRLGLLKLVNQVAGLTPEVLPETFQL 969
Query: 984 NWLRLRXXXXXXXXXXXXATSMLVQRQVLATDDPNITPTELESATSQLFNTLAELLDNFP 1043
N R+R TS+L+ RQ+LA ES T + L ELLD
Sbjct: 970 NLFRVRDIQAEIQNIIVVTTSLLIWRQMLAKS---------ESETESMAKKLLELLDGKE 1020
Query: 1044 DVSTAKIMEVMLRXXXXXXXXXXXXXXXDERTESRKQILARVFLKSLQTDDPVFKKVSRS 1103
+I+E + E +K+++ + KSL + V+++V+
Sbjct: 1021 GAGLTEIIETTM----------------SEEDGEKKKMMRGLLGKSLGEGNTVYERVTSC 1064
Query: 1104 VYCAFRAITLGGSGARGRKLADAALRRI-GATKLTDRVVRSAEILIRAASISQQVHGPWY 1162
+Y A R L G+G G+++ + ++++ G L +RV+ +A L A +S +VHGPW
Sbjct: 1065 IYKAARGALLAGNGENGKRMVETEMKKVGGGGGLKERVLETARALGVVACVSVRVHGPWL 1124
Query: 1163 NHLV 1166
L+
Sbjct: 1125 TQLM 1128
>AT4G09150.2 | chr4:5828753-5833475 FORWARD LENGTH=1099
Length = 1098
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 237/489 (48%), Positives = 317/489 (64%), Gaps = 38/489 (7%)
Query: 55 TAEEIEAKLRDADLRRQQFHEALSCKARCTVRYPSCPSQEEDPKKRLEAKLVAAEQKRLS 114
+A EI++KLR+ADLRRQQ++E+LS KAR +R P S EE +RLE+KL AAEQKRLS
Sbjct: 46 SAAEIDSKLREADLRRQQYYESLSSKARPKMRSPRSGSIEE-LSQRLESKLNAAEQKRLS 104
Query: 115 LLAKEQSRLAKLDELRQAAKNDAELRFKKEREELGMKVESRVRQAEEKRTQLMHARSQRR 174
+L KE +RLAK+DE RQAAKN E R +KER+EL KVE RV +AE+ R L A +QRR
Sbjct: 105 ILEKELARLAKMDEARQAAKNGLEQRVEKERDELESKVEERVLKAEKNRMLLFKAMAQRR 164
Query: 175 AALEERTTKYLVQRVAWENKYRERVHSAILQKRTAAEKRRTGLLEGEKRRAQGRFSQVQL 234
AA +R + L+++ E +Y+E V +AI QKR AAE +R G+LE E+RRA R ++V
Sbjct: 165 AAKRQRAAQSLMKKAIQETRYKESVRAAIYQKRAAAESKRMGILEAERRRANARLTRVFG 224
Query: 235 AARTLSCQREADRSKLKEQLEDKLQRAKRQRAEYLKQRGSTHSFTYTASV---KHGDFLS 291
AA ++ Q+EA+R K+K++LE++LQRAK+ +A+Y+++R S + + S K+ L
Sbjct: 225 AASSVRSQKEAERRKMKDRLEERLQRAKKLKAQYMRRRRGMDSCSSSRSETMRKNQVHLV 284
Query: 292 RNLARCWRRFITSRKTTVVLARAFDMLRINEESVKPMPFEKLALCIESPTVLQTTRAFLD 351
R L RCWRRF +K+T VLARA+ L INE+S++ +PFE+ A+ + S +V+QT +A LD
Sbjct: 285 RMLVRCWRRFAKYKKSTFVLARAYHELGINEKSIESVPFEQFAIQMNSVSVIQTVKALLD 344
Query: 352 RLESRFTLXXXXXXXXXENIDHLLKHLGSPKRTLSKSGGRTRVTPTKAARNSDVSKL--- 408
RLE R TL ENI+HLLKH+ P R G++ +K +NS SK+
Sbjct: 345 RLEIRLTL---SKASNVENINHLLKHIFPPVRR-----GKSPSPMSKGEQNSPNSKMGYQ 396
Query: 409 -----PRYSPRIVLCAYMILGHPSVVFNERGEREKLLVESAENFVKEFELLIKTILDGSS 463
RY RI LCAYMI HP +F RGE E LVESA ++EFELL+K IL+G
Sbjct: 397 KLKKIARYPARIFLCAYMIKQHPGAIFRGRGEHEIALVESATCLIREFELLVKVILEGPE 456
Query: 464 GACILKQPILDDLSPGSSNYQESSAVVADR-KKFRSQLASFDKAWCAYLYHFVVWKAKDA 522
PG+ ++ VA R KKFRSQL +FDKAWC+YL FVVWK DA
Sbjct: 457 STL-----------PGNVSF------VAQRPKKFRSQLEAFDKAWCSYLEGFVVWKINDA 499
Query: 523 KSLEEDLVR 531
K LE+DL R
Sbjct: 500 KLLEKDLAR 508
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/521 (36%), Positives = 306/521 (58%), Gaps = 35/521 (6%)
Query: 666 MSNPMTVSSTLSEKRPTENEQMVNEILH---GFLADS-SSNIGTVEGGFKEKVRETMEKA 721
+S P V+++ +ENE +VNEI+H ADS N G + +V+ETMEKA
Sbjct: 589 ISTPNVVANSFDAALASENEVIVNEIVHDNSSSFADSLDPNTGDT-SNLQVRVKETMEKA 647
Query: 722 FWDVVVDSLRGDMPDYSYLVQLVKEVRDTLYEMVPKGWKXXXXXXXXXXXXXQVLESGTQ 781
FWD V++S++ PD+S++++L+KEVRD L E+ PK W+ Q+L SG
Sbjct: 648 FWDGVMESMKQSQPDFSWVIKLMKEVRDELCEISPKDWRQEIVQTIDTDVLSQLLASGNV 707
Query: 782 DMQYLGQILQYSLGMLRKLSSPAKEDEMKRSHDKLLGELTEHSECNNSGSNSFVIAVIKG 841
DM YLG IL++SLG+L KLS+PA E+E++ +H KL+ EL E + ++S+ + ++KG
Sbjct: 708 DMGYLGNILEFSLGILLKLSAPANEEEIRVTHHKLMTELGEIVPTDGHSNSSYAVLMVKG 767
Query: 842 LRFTMEELKALKTEVSRARIQLLEPIIKGSGGVEYLQKAFADRYGFPSNASVALRSTAQW 901
LRF +++++ LK E+S++R++LLEP++KG G+EYL+K+F+ R+G P AS +L T +W
Sbjct: 768 LRFVLQQIQILKKEISKSRLKLLEPLLKGPAGLEYLKKSFSSRHGSPDQASSSLPLTKRW 827
Query: 902 ISTSKDTVEVEWNEHAQPFVA--------------TLRSGHGVPDQRQSTIPVSDDTG-- 945
+ + + E EW EH A T+R+G V + P S G
Sbjct: 828 LLSVRGEAEREWKEHKDALSAVINNHSGSSGLPSTTMRTGGNVSSVSKVNTPSSPFPGIE 887
Query: 946 LPECTGQRLDQLIRIGLLQLISGIEGVQMQSVTETFKLNWLRLRXXXXXXXXXXXXATSM 1005
L EC G+ +D L+RIGLL+++S I G+ +++V ETF+LN RLR + S+
Sbjct: 888 LSECKGETVDLLVRIGLLKMVSEIGGLTLETVPETFQLNLSRLRDVQSQIQKITLVSISV 947
Query: 1006 LVQRQVLATDDPNITPTELESATSQLFNTLAELLDNFPDVSTAKIMEVMLRXXXXXXXXX 1065
L+ +Q L ++ N + ++E+ T N L E+LD PD ++IME +
Sbjct: 948 LILQQTLVSE--NSSSIDMEAITRTCINRLYEMLDAKPDAGLSEIMETL----------- 994
Query: 1066 XXXXXXDERTESRKQILARVFLKSLQTDDPVFKKVSRSVYCAFRAITLGGSGARGRKLAD 1125
E++KQ++A + +KSLQ D VF VS+++Y A RA L G+ + ++L +
Sbjct: 995 -SELLDSNDAETKKQVIANMLVKSLQAGDAVFTHVSQTIYLAIRAAVLAGNNTKRKQLVE 1053
Query: 1126 AALRRIGATKLTDRVVRSAEILIRAASISQQVHGPWYNHLV 1166
LR+IGA L+D+V+ ++IL+ A++S+ VHG WY L+
Sbjct: 1054 TMLRKIGAASLSDKVIEVSDILVLVATVSRSVHGLWYEELL 1094
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.129 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 20,692,775
Number of extensions: 805035
Number of successful extensions: 3438
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 3397
Number of HSP's successfully gapped: 5
Length of query: 1166
Length of database: 11,106,569
Length adjustment: 110
Effective length of query: 1056
Effective length of database: 8,090,809
Effective search space: 8543894304
Effective search space used: 8543894304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 117 (49.7 bits)