BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0550800 Os02g0550800|AK108711
(480 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38290.1 | chr2:16039672-16042291 REVERSE LENGTH=476 591 e-169
AT3G24300.1 | chr3:8805858-8807354 REVERSE LENGTH=499 77 3e-14
AT3G24290.1 | chr3:8801400-8802890 REVERSE LENGTH=497 74 2e-13
AT4G13510.1 | chr4:7858220-7859725 FORWARD LENGTH=502 70 2e-12
AT1G64780.1 | chr1:24061021-24062565 REVERSE LENGTH=515 67 2e-11
AT4G28700.1 | chr4:14161681-14163195 FORWARD LENGTH=505 58 1e-08
>AT2G38290.1 | chr2:16039672-16042291 REVERSE LENGTH=476
Length = 475
Score = 591 bits (1523), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/456 (62%), Positives = 347/456 (76%), Gaps = 11/456 (2%)
Query: 12 TTPSSPDWLNKGDNAWQMTSATLVGLQSMPGLVILYGSIVKKKWAINSAFMALYAFAAVW 71
+ P P+WLNKGDNAWQ+T+ATLVGLQSMPGLVILY SIVKKKWA+NSAFMALYAFAAV
Sbjct: 8 SLPEVPEWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVL 67
Query: 72 ICWVVWAYNMSFGDRLLPFWGKARPALGQSFLVAQSELTATAIRYHNGSAEAPMLKPLYP 131
+CWV+ Y M+FG+ LLPFWGK PA Q +L Q+++ + + P +P
Sbjct: 68 LCWVLLCYKMAFGEELLPFWGKGGPAFDQGYLKGQAKIPNSNVA-----------APYFP 116
Query: 132 VATMVYFQCMFASITIIILAGSLLGRMNIKAWMAFVPLWITFSYTVCAFSLWGGGFLFQW 191
+AT+VYFQ FA+IT I++AGS+LGRMNIKAWMAFVPLW+ FSYTV A+S+WGGGFL+QW
Sbjct: 117 MATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSYTVGAYSIWGGGFLYQW 176
Query: 192 GVIDYSGGYVIHLSSGIAGLTAAYWVGPRSASDRERFPPNNIXXXXXXXXXXXXXXTGFN 251
GVIDYSGGYVIHLSSG+AG AAYWVGPR +DRERFPPNN+ +GFN
Sbjct: 177 GVIDYSGGYVIHLSSGVAGFVAAYWVGPRPKADRERFPPNNVLLMLAGAGLLWMGWSGFN 236
Query: 252 GGDPYSANIDSSMAVLNTHICASTSLLVWTILDVFFFGKPSVIGAVQGMITGLVCITPGA 311
GG PY+AN+ SS+AVLNT++ A+TSLLVWT LDV FFGKPSVIGA+QGM+TGL +TPGA
Sbjct: 237 GGAPYAANLTSSIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGVTPGA 296
Query: 312 GLVQGWAAIVMGILSGSIPWYTMMVLHKKWSFMQRIDDTLGVFHTHAVAGFLGGATTGLF 371
GL+Q WAAI++G++SG+ PW +MM++HKK + +Q++DDTL VF+THAVAG LGG TGLF
Sbjct: 297 GLIQTWAAIIIGVVSGTAPWASMMIIHKKSALLQKVDDTLAVFYTHAVAGLLGGIMTGLF 356
Query: 372 AEPILCSLFLSIPDSKGAFYGGPGGSQFGKQIAGALFVTAWNXXXXXXXXXXXXXXXPLR 431
A P LC L L +P ++GAFYGG GG Q KQ+AGA F+ WN PLR
Sbjct: 357 AHPDLCVLVLPLPATRGAFYGGNGGKQLLKQLAGAAFIAVWNVVSTTIILLAIRVFIPLR 416
Query: 432 IADQELLIGDDAVHGEEAYAIWAEGELNDMTHHNES 467
+A++EL IGDDA HGEEAYA+W +GE D T H +
Sbjct: 417 MAEEELGIGDDAAHGEEAYALWGDGEKFDATRHVQQ 452
>AT3G24300.1 | chr3:8805858-8807354 REVERSE LENGTH=499
Length = 498
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 113/479 (23%), Positives = 170/479 (35%), Gaps = 80/479 (16%)
Query: 24 DNAWQMTSATLVGLQSMPGLVILYGSIVKKKWAINSAFMALYAFAAVWICWVVWAYNMSF 83
DN + + SA LV + G +L V+ K +N + AA + + ++ Y +F
Sbjct: 46 DNTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAF 104
Query: 84 GDRLLPFWGKARPALGQSFLVAQSELTATAIRYHNGSAEAPMLKPLYPVATMVY----FQ 139
G F G+ AL +P T Y +Q
Sbjct: 105 GGSSEGFIGRHNFALRD-----------------------------FPTPTADYSFFLYQ 135
Query: 140 CMFASITIIILAGSLLGRMNIKAWMAFVPLWITFSYTVCAFSLW-----------GGGFL 188
FA I +GS+ R A++ + F Y V + W L
Sbjct: 136 WAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASPFRSADDRL 195
Query: 189 FQWGVIDYSGGYVIHLSSGIAGLTAAYWVGPRSASDRERFPPNNIXXXXXXXXXXXXXX- 247
F G ID++G V+H+ GIAGL A GPR R RF
Sbjct: 196 FSTGAIDFAGSGVVHMVGGIAGLWGALIEGPR----RGRFEKGGRAIALRGHSASLVVLG 251
Query: 248 --------TGFNGGD------PYSANIDSSM------AVLNTHICASTSLLVWTILDVFF 287
GFN G PY++ + +NT + T+ L
Sbjct: 252 TFLLWFGWYGFNPGSFTKILVPYNSGSNYGQWSGIGRTAVNTTLSGCTAALTTLFGKRLL 311
Query: 288 FGKPSVIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWYTMMVLHKKWSFMQRI 347
G +V G++ G IT G +V+ WAAIV G ++ + ++ K + + +
Sbjct: 312 SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFMASVV-----LIGCNKLAELVQY 366
Query: 348 DDTLGVFHTHAVAGFLGGATTGLFA-EPILCSLFLSIPDSKGAFYGGPGGSQFGKQIAGA 406
DD L H G G GLFA E L ++ + P + G GG G Q+
Sbjct: 367 DDPLEAAQLHGGCGAWGLIFVGLFAKEKYLNEVYGATPGRPYGLFMGGGGKLLGAQLVQI 426
Query: 407 LFVTAWNXXXXXXXXXXXXXXXPLRIADQELLIGDDAV-HGEEAYAIWAEGELNDMTHH 464
L + W LRI++Q + G D HG AY I+ + + D +H
Sbjct: 427 LVIVGWVSATMGTLFFILKRLNLLRISEQHEMQGMDMTRHGGFAY-IYHDND--DESHR 482
>AT3G24290.1 | chr3:8801400-8802890 REVERSE LENGTH=497
Length = 496
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 112/482 (23%), Positives = 170/482 (35%), Gaps = 78/482 (16%)
Query: 24 DNAWQMTSATLVGLQSMPGLVILYGSIVKKKWAINSAFMALYAFAAVWICWVVWAYNMSF 83
DN + + SA LV + G +L V+ K +N + AA + + ++ Y +F
Sbjct: 46 DNTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAF 104
Query: 84 GDRLLPFWGKARPALGQSFLVAQSELTATAIRYHNGSAEAPMLKPLYPVATMVYFQCMFA 143
G+ F G R++ G P L Y + +Q FA
Sbjct: 105 GESSDGFIG----------------------RHNFGLQNFPTLTSDY---SFFLYQWAFA 139
Query: 144 SITIIILAGSLLGRMNIKAWMAFVPLWITFSYTVCAFSLWG----------GGFLFQWGV 193
I +GS+ R A++ + F Y V + W LF G
Sbjct: 140 IAAAGITSGSIAERTKFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASPFRSEDRLFGTGA 199
Query: 194 IDYSGGYVIHLSSGIAGLTAAYWVGPRSASDRERFPPNNIXXXXXXXXXXXXXX------ 247
ID++G V+H+ GIAGL A GPR RFP
Sbjct: 200 IDFAGSGVVHMVGGIAGLWGALIEGPRIG----RFPDGGHAIALRGHSASLVVLGTFLLW 255
Query: 248 ---TGFNGGD------PYSANIDSSM------AVLNTHICASTSLLVWTILDVFFFGKPS 292
GFN G PY++ + + T + T+ L G +
Sbjct: 256 FGWYGFNPGSFTKILIPYNSGSNYGQWSGIGRTAVTTTLSGCTAALTTLFGKRLLSGHWN 315
Query: 293 VIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWYTMMVLHKKWSFMQRIDDTLG 352
V G++ G IT G +V WAAIV G ++ + ++ K + + + DD L
Sbjct: 316 VTDVCNGLLGGFAAITAGCSVVDPWAAIVCGFVASLV-----LIGCNKLAELLKYDDPLE 370
Query: 353 VFHTHAVAGFLGGATTGLFA-EPILCSLFLSIPDSKGAFYGGPGGSQFGKQIAGALFVTA 411
H G G GLFA E + ++ + P + G GG G Q+ + +
Sbjct: 371 AAQLHGGCGAWGLIFVGLFAKEKYINEVYGASPGRHYGLFMGGGGKLLGAQLVQIIVIVG 430
Query: 412 WNXXXXXXXXXXXXXXXPLRIADQELLIGDD-AVHGEEAYAIWAEGELNDMTHHNESTHS 470
W LRI++Q + G D A HG AY + H N+
Sbjct: 431 WVSATMGTLFFILKKLNLLRISEQHEMRGMDLAGHGGFAY----------IYHDNDDDSI 480
Query: 471 GV 472
GV
Sbjct: 481 GV 482
>AT4G13510.1 | chr4:7858220-7859725 FORWARD LENGTH=502
Length = 501
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 164/468 (35%), Gaps = 69/468 (14%)
Query: 24 DNAWQMTSATLVGLQSMPGLVILYGSIVKKKWAINSAFMALYAFAAVWICWVVWAYNMSF 83
DN + + SA LV G +L V+ K +N + AA + + ++ Y +F
Sbjct: 42 DNTYLLFSAYLV-FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAF 100
Query: 84 GDRLLPFWGKARPALGQSFLVAQSELTATAIRYHNGSAEAPMLKPLYPVATMVYFQCMFA 143
G F GK ++ G + P Y + +Q FA
Sbjct: 101 GSPSNGFIGK----------------------HYFGLKDIPTASADY---SNFLYQWAFA 135
Query: 144 SITIIILAGSLLGRMNIKAWMAFVPLWITFSYTVCAFSLWG-----------GGFLFQWG 192
I +GS+ R A++ + F Y V + W G LF G
Sbjct: 136 IAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASPFRTDGDLLFSTG 195
Query: 193 VIDYSGGYVIHLSSGIAGLTAAYWVGPRSASDRERFPPNNIXXXXXXXXXXXXXX----- 247
ID++G V+H+ GIAGL A GPR RF
Sbjct: 196 AIDFAGSGVVHMVGGIAGLWGALIEGPRLG----RFDNGGRAIALRGHSASLVVLGTFLL 251
Query: 248 ----TGFNGGDPYSANIDSSMAVLNTHICA------STSLLVWTILDVFFFGKP------ 291
GFN G + N A +T+L T FGK
Sbjct: 252 WFGWYGFNPGSFNKILVTYETGTYNGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLSGHW 311
Query: 292 SVIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWYTMMVLHKKWSFMQRIDDTL 351
+V G++ G IT G +V+ WAAI+ G ++ + ++ K + + DD L
Sbjct: 312 NVTDVCNGLLGGFAAITGGCSVVEPWAAIICGFVAALV-----LLGCNKLAEKLKYDDPL 366
Query: 352 GVFHTHAVAGFLGGATTGLFA-EPILCSLFLSIPDSKGAFYGGPGGSQFGKQIAGALFVT 410
H G G T LFA E L ++ + P + G GG G Q+ + +T
Sbjct: 367 EAAQLHGGCGAWGLIFTALFAQEKYLNQIYGNKPGRPHGLFMGGGGKLLGAQLIQIIVIT 426
Query: 411 AWNXXXXXXXXXXXXXXXPLRIADQELLIGDDAV-HGEEAYAIWAEGE 457
W LRI+ ++ + G D HG AY + + E
Sbjct: 427 GWVSATMGTLFFILKKMKLLRISSEDEMAGMDMTRHGGFAYMYFDDDE 474
>AT1G64780.1 | chr1:24061021-24062565 REVERSE LENGTH=515
Length = 514
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 164/468 (35%), Gaps = 63/468 (13%)
Query: 24 DNAWQMTSATLVGLQSMPGLVILYGSIVKKKWAINSAFMALYAFAAVWICWVVWAYNMSF 83
DN + + SA LV + G +L V+ K +N + AA I + ++ + +F
Sbjct: 52 DNTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVLDAAAGAISYYLFGFAFAF 110
Query: 84 GDRLLPFWGKARPALGQSFLVAQSELTATAIRYHNGSAEAPMLKPLYPVATMVYF--QCM 141
G F G+ SF S P P + +F Q
Sbjct: 111 GTPSNGFIGRH-----HSFFALSS-------------------YPERPGSDFSFFLYQWA 146
Query: 142 FASITIIILAGSLLGRMNIKAWMAFVPLWITFSYTVCAFSLWG-----------GGFLFQ 190
FA I +GS+ R A++ + F Y + W LF
Sbjct: 147 FAIAAAGITSGSIAERTQFVAYLIYSTFLTGFVYPTVSHWFWSSDGWASASRSDNNLLFG 206
Query: 191 WGVIDYSGGYVIHLSSGIAGLTAAYWVGPRSAS-DRE------RFPPNNIXXXXXXXX-- 241
G ID++G V+H+ GIAGL A GPR DR R ++
Sbjct: 207 SGAIDFAGSGVVHMVGGIAGLCGALVEGPRIGRFDRSGRSVALRGHSASLVVLGTFLLWF 266
Query: 242 --------XXXXXXTGFNGGDPYSANIDS-SMAVLNTHICASTSLLVWTILDVFFFGKPS 292
G++ PY + + T + T+ L G +
Sbjct: 267 GWYGFNPGSFLTILKGYDKSRPYYGQWSAVGRTAVTTTLSGCTAALTTLFSKRLLAGHWN 326
Query: 293 VIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWYTMMVLHKKWSFMQRIDDTLG 352
VI G++ G IT G +V+ WAAIV G ++ S +L KK + DD L
Sbjct: 327 VIDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVA-SWVLIGFNLLAKKLKY----DDPLE 381
Query: 353 VFHTHAVAGFLGGATTGLFAEPILCSLFLSIPDSKGAFYGGPGGSQFGKQIAGALFVTAW 412
H G G TGLFA + S G F GG GG QI + + W
Sbjct: 382 AAQLHGGCGAWGLIFTGLFARKEYVNEIYSGDRPYGLFMGG-GGKLLAAQIVQIIVIVGW 440
Query: 413 NXXXXXXXXXXXXXXXPLRIADQELLIGDDAV-HGEEAYAIWAEGELN 459
LRI+ ++ + G D HG AYA E +++
Sbjct: 441 VTVTMGPLFYGLHKMNLLRISAEDEMAGMDMTRHGGFAYAYNDEDDVS 488
>AT4G28700.1 | chr4:14161681-14163195 FORWARD LENGTH=505
Length = 504
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 169/471 (35%), Gaps = 68/471 (14%)
Query: 24 DNAWQMTSATLVGLQSMPGLVILYGSIVKKKWAINSAFMALYAFAAVWICWVVWAYNMSF 83
DN + + SA LV + G +L V+ K +N + AA + + ++ + +F
Sbjct: 51 DNTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVIDAAAGGLFYYLFGFAFAF 109
Query: 84 GDRLLPFWGKARPALGQSFLVAQSELTATAIRYHNGSAEAPMLKPLYPVATMVYFQCMFA 143
G F GK + G + P YP +Q FA
Sbjct: 110 GSPSNGFIGK----------------------HFFGMYDFPQPTFDYP---YFLYQWTFA 144
Query: 144 SITIIILAGSLLGRMNIKAWMAFVPLWITFSYTVCAFSLWGG----------GFLFQWGV 193
I +GS+ R A++ + Y + + W LFQ GV
Sbjct: 145 IAAAGITSGSIAERTQFVAYLIYSSFLTGLVYPIVSHWFWSSDGWASPARSENLLFQSGV 204
Query: 194 IDYSGGYVIHLSSGIAGLTAAYWVGPRSASDRERFPPNNIXXXXXXXXXXXXXXT----- 248
ID++G V+H+ GIAGL A GPR P +
Sbjct: 205 IDFAGSGVVHMVGGIAGLWGALIEGPRIGRFGVGGKPVTLRGHSATLVVLGTFLLWFGWY 264
Query: 249 GFNGG------DPYSANIDSSM-----AVLNTHICASTSLLVWTILDVFFFGKP------ 291
GFN G Y SS AV T + +T+L T FGK
Sbjct: 265 GFNPGSFATIFKAYGETPGSSFYGQWSAVGRTAV--TTTLAGCTAALTTLFGKRLIDGYW 322
Query: 292 SVIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWYTMMVLHKKWSFMQRIDDTL 351
+V G++ G IT G +V+ WAA+V G ++ + +M ++ +Q DD L
Sbjct: 323 NVTDVCNGLLGGFAAITSGCSVVEPWAALVCGFVAA----WVLMGCNRLAEKLQ-FDDPL 377
Query: 352 GVFHTHAVAGFLGGATTGLFAEP-ILCSLFLSIPDSKGAFYGGPGGSQFGKQIAGALFVT 410
H G G TGLFAE + +F P+ G GG + L +T
Sbjct: 378 EAAQLHGGCGAWGIIFTGLFAEKRYIAEIFGGDPNRPFGLLMGGGGRLLAAHVVQILVIT 437
Query: 411 AWNXXXXXXXXXXXXXXXPLRIADQELLIG-DDAVHGEEAYAIWAEGELND 460
W LRI ++ + G D HG AY ++ E E+ +
Sbjct: 438 GWVSVTMGTLFFILHKLKLLRIPAEDEIAGVDPTSHGGLAY-MYTEDEIRN 487
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.137 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,360,586
Number of extensions: 417280
Number of successful extensions: 795
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 787
Number of HSP's successfully gapped: 7
Length of query: 480
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 378
Effective length of database: 8,310,137
Effective search space: 3141231786
Effective search space used: 3141231786
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 114 (48.5 bits)