BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0528100 Os02g0528100|AK063839
(174 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G09980.1 | chr3:3069358-3071145 FORWARD LENGTH=179 146 6e-36
AT2G36410.1 | chr2:15279041-15280270 FORWARD LENGTH=196 131 2e-31
AT2G27740.1 | chr2:11822800-11823575 FORWARD LENGTH=175 130 3e-31
AT3G52920.1 | chr3:19624601-19625981 FORWARD LENGTH=181 129 9e-31
AT5G03660.1 | chr5:938068-939811 FORWARD LENGTH=174 121 2e-28
AT3G52900.1 | chr3:19613134-19613852 FORWARD LENGTH=165 115 1e-26
AT2G36355.1 | chr2:15242449-15243276 FORWARD LENGTH=156 105 1e-23
>AT3G09980.1 | chr3:3069358-3071145 FORWARD LENGTH=179
Length = 178
Score = 146 bits (368), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 98/140 (70%)
Query: 35 SEWDQSSSRSALSXXXXXXXXXXXXXXXXXXXXXSMLGRVEEETKRLAFIRQELEVMSDP 94
S+ D+ SR+ALS + LGRVEEETKRLA IR+ELE ++DP
Sbjct: 39 SKEDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALIREELEGLADP 98
Query: 95 TRREVETIRKRIDKVNRQLKPLGKNCLKKEKEYKACLEAYNEKSNEKATLVNRLMELVGE 154
R+EV +RK+ID VN++LKPLG KKE+EYK LEA+NEK+ EK L+ RLMELVGE
Sbjct: 99 MRKEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLITRLMELVGE 158
Query: 155 SEQLRMKKLEELNKTVESLY 174
SE++RMKKLEEL+K ++S++
Sbjct: 159 SEKMRMKKLEELSKNIDSIH 178
>AT2G36410.1 | chr2:15279041-15280270 FORWARD LENGTH=196
Length = 195
Score = 131 bits (329), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 95/142 (66%), Gaps = 3/142 (2%)
Query: 35 SEWDQSSSRSALSXXXXXXXXXXXXXXXXXXXXXSMLGRVEEETKRLAFIRQELEVMSDP 94
S D+ +RSALS + LGRVE+ETKRL+ IR+ELE M+DP
Sbjct: 54 SREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLSTIREELESMADP 113
Query: 95 TRREVETIRKRIDKVNRQLKPLGKNCLKKEKEYKACLEAYNEKSNEKATLVNRLME---L 151
R+EV +RK+ID VN++LKPLG KKE+EYK L+ +NEK+ EK L+ +LME L
Sbjct: 114 MRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMEMEQL 173
Query: 152 VGESEQLRMKKLEELNKTVESL 173
VGESE+LRM KLEEL+K++E++
Sbjct: 174 VGESEKLRMIKLEELSKSIETV 195
>AT2G27740.1 | chr2:11822800-11823575 FORWARD LENGTH=175
Length = 174
Score = 130 bits (327), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 84/101 (83%)
Query: 71 LGRVEEETKRLAFIRQELEVMSDPTRREVETIRKRIDKVNRQLKPLGKNCLKKEKEYKAC 130
LG EE T+RLA IR+ELE ++DP R+E+ IRKR+D +NR+LKPLG++C +KE+E+K
Sbjct: 70 LGLAEEATRRLAEIREELEALTDPMRKEISAIRKRVDAINRELKPLGQSCQRKEREFKEA 129
Query: 131 LEAYNEKSNEKATLVNRLMELVGESEQLRMKKLEELNKTVE 171
LEAYNEK+ EKA V++L+ELV ESE+LRM KLEEL+K++E
Sbjct: 130 LEAYNEKNKEKAIFVSKLVELVTESEKLRMTKLEELSKSIE 170
>AT3G52920.1 | chr3:19624601-19625981 FORWARD LENGTH=181
Length = 180
Score = 129 bits (323), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 96/141 (68%), Gaps = 3/141 (2%)
Query: 35 SEWDQSSSRSALSXXXXXXXXXXXXXXXXXXXXXSMLGRVEEETKRLAFIRQELEVMSDP 94
S+ D+ +RSALS + LGRVEEET+RLA IR+ELE M+DP
Sbjct: 25 SKEDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGRVEEETRRLASIREELETMADP 84
Query: 95 TRREVETIRKRIDKVNRQLKPLGKNCLKKEKEYKACLEAYNEKSNEKATLVNRLME---L 151
R+EV +RK+ID VN++LKPLG KKE+EYK L+ +NEK+ EK L+ +LME L
Sbjct: 85 MRKEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMEMGQL 144
Query: 152 VGESEQLRMKKLEELNKTVES 172
VGESE+LR+KKL+EL++++++
Sbjct: 145 VGESEKLRLKKLDELSRSIDT 165
>AT5G03660.1 | chr5:938068-939811 FORWARD LENGTH=174
Length = 173
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 79/103 (76%)
Query: 69 SMLGRVEEETKRLAFIRQELEVMSDPTRREVETIRKRIDKVNRQLKPLGKNCLKKEKEYK 128
+ LGRVE+E+KRLA IR+ELE +DP R+EV +RK+ID ++++LKPLG KKE EYK
Sbjct: 67 AQLGRVEDESKRLAMIREELEGFADPMRKEVTMVRKKIDSLDKELKPLGNTVQKKETEYK 126
Query: 129 ACLEAYNEKSNEKATLVNRLMELVGESEQLRMKKLEELNKTVE 171
LEA+NEK+ EK L+ +L EL GESE+ R KKLEEL+K ++
Sbjct: 127 DALEAFNEKNKEKVELITKLQELEGESEKFRFKKLEELSKNID 169
>AT3G52900.1 | chr3:19613134-19613852 FORWARD LENGTH=165
Length = 164
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 78/103 (75%)
Query: 71 LGRVEEETKRLAFIRQELEVMSDPTRREVETIRKRIDKVNRQLKPLGKNCLKKEKEYKAC 130
LG EE T+ L +ELE+M DP R+EV +RK+ID NR +K L ++C KKEKEYK
Sbjct: 61 LGFAEEATRCLTQTLEELEIMGDPMRKEVGMVRKKIDMANRDIKSLAQSCQKKEKEYKDT 120
Query: 131 LEAYNEKSNEKATLVNRLMELVGESEQLRMKKLEELNKTVESL 173
LEA+NEK+ EKA LV+ LMEL+ ESE+LR+KKLEE+NKTV +L
Sbjct: 121 LEAFNEKNKEKAHLVSMLMELLAESERLRIKKLEEINKTVGTL 163
>AT2G36355.1 | chr2:15242449-15243276 FORWARD LENGTH=156
Length = 155
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 77/103 (74%)
Query: 71 LGRVEEETKRLAFIRQELEVMSDPTRREVETIRKRIDKVNRQLKPLGKNCLKKEKEYKAC 130
LG EE T+ L + LE+M DP R+EV +RK+I+ NR++K L ++C KKE+EYK
Sbjct: 52 LGFAEEATRSLTQTLEGLEIMGDPMRKEVGMVRKKIEMANREIKSLSQSCQKKEREYKEI 111
Query: 131 LEAYNEKSNEKATLVNRLMELVGESEQLRMKKLEELNKTVESL 173
EA++EK+ EKA LV+ LMEL+ ESE++R+KKLEE+NKT+ SL
Sbjct: 112 HEAFDEKNKEKAHLVSILMELLAESERVRVKKLEEINKTIGSL 154
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.310 0.127 0.341
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,941,692
Number of extensions: 98730
Number of successful extensions: 598
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 597
Number of HSP's successfully gapped: 7
Length of query: 174
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 82
Effective length of database: 8,584,297
Effective search space: 703912354
Effective search space used: 703912354
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 108 (46.2 bits)