BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0515200 Os02g0515200|AK100535
(623 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G33490.1 | chr2:14183552-14187666 FORWARD LENGTH=624 306 3e-83
AT5G41100.1 | chr5:16447429-16450610 FORWARD LENGTH=587 256 4e-68
AT3G26910.2 | chr3:9915304-9918511 REVERSE LENGTH=615 253 2e-67
>AT2G33490.1 | chr2:14183552-14187666 FORWARD LENGTH=624
Length = 623
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 222/584 (38%), Positives = 300/584 (51%), Gaps = 100/584 (17%)
Query: 1 MKSPLLRLKGFGHHQQHRERKSRQPQPQPTPAKLDELADAAQDVEEMRNCYDGFISAAAA 60
MK+ L RL+G H + ++R+ + Q DELA A+QDVE+MR+CYD ++AAAA
Sbjct: 1 MKTSLRRLRGVLHKHESKDRRDLRALVQK-----DELAQASQDVEDMRDCYDSLLNAAAA 55
Query: 61 TTNGVYEFAEALEELGSCLLAKPVLNDDDDDSGRVLMMLGKAQYELQKSADRYRTNIIHT 120
T N YEF+E+L ELG+CLL K LNDD++ SGRVL+MLGK Q+ELQK D+YR++I T
Sbjct: 56 TANSAYEFSESLRELGACLLEKTALNDDEE-SGRVLIMLGKLQFELQKLVDKYRSHIFQT 114
Query: 121 ITTPSESLLKELQTLEEMKQQCDMKRDAYETMRASYSDKGGSRHSKTESFSTEQLDASFL 180
IT PSESLL EL+ +EEM++ CD KR+ YE M +KG S+ K E+FS +QL +
Sbjct: 115 ITIPSESLLNELRIVEEMQRLCDEKRNVYEGMLTRQREKGRSKGGKGETFSPQQLQEAHD 174
Query: 181 EYQEDSALFTFRLKSLKQGQFQSLLTQAARHHAAQLSFFRKGLKCLEALEPRVKAISEKH 240
+Y+ ++ LF FRLKSLKQGQ +SLLTQAARHHAAQL FF+K L LE ++P V+ ++E
Sbjct: 175 DYENETTLFVFRLKSLKQGQTRSLLTQAARHHAAQLCFFKKALSSLEEVDPHVQMVTESQ 234
Query: 241 HIDYNFSGL-------EDDGSDNDGYSTYDSCSDDGELSFDYEINDRDQDFLTSR-GSMD 292
HIDY+FSGL E + ++NDG + DDGELSF+Y +ND+DQD +S GS +
Sbjct: 235 HIDYHFSGLEDDDGDDEIENNENDGSEVH----DDGELSFEYRVNDKDQDADSSAGGSSE 290
Query: 293 FDKSDQTTSPKPIXXXXXXXXXXXXXXIVFPQLKPEF----------------------A 330
SD I FPQ+ +
Sbjct: 291 LGNSD----------------------ITFPQIGGPYTAQENEEGNYRKSHSFRRDVRAV 328
Query: 331 THSAPLFAGN-LLDETDRLRQMRPSSTK--HSYRLPTPVGADNPVPSGSHRLHHSAQFFE 387
+ SAPLF N +++L +MR + T+ ++Y LPTPV S + H +
Sbjct: 329 SQSAPLFPENRTTPPSEKLLRMRSTLTRKFNTYALPTPVETTRSPSSTTSPGHKNVGSSN 388
Query: 388 TKPHAPTNLWHSSPLTKDYNGAMHN---AATKPXXXXXTDD-----------------LK 427
+W+SSPL + + A K ++ L
Sbjct: 389 PTKAITKQIWYSSPLETRGPAKVSSRSMVALKEQVLRESNKNTSRLPPPLADGLLFSRLG 448
Query: 428 KLKRESWSGPIPIKAGSGGKPFSQADHRPSPTMAYPGAMPAAKPHVRHXXXXXXXXXXXX 487
LKR S+SGP+ K KP S H Y G +P
Sbjct: 449 TLKRRSFSGPLTSKPLP-NKPLSTTSH------LYSGPIP-------RNPVSKLPKVSSS 494
Query: 488 XXXXXXXXXXLKISELHLLPLPPANVDPVRPSGLVGYSGPLVSK 531
KISELH LP PP + S +GYS PLVS+
Sbjct: 495 PTASPTFVSTPKISELHELPRPPPRSS-TKSSRELGYSAPLVSR 537
>AT5G41100.1 | chr5:16447429-16450610 FORWARD LENGTH=587
Length = 586
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 191/518 (36%), Positives = 269/518 (51%), Gaps = 77/518 (14%)
Query: 32 AKLDELADAAQDVEEMRNCYDGFISAAAATTNGVYEFAEALEELGSCLLAKPVLNDDDDD 91
A+++ LA AA+D+++MR YD + AAA N YEF+E+L E+GSCL + + +D +
Sbjct: 29 AQIEGLARAAKDMQDMREGYDRLLEVAAAMANSAYEFSESLGEMGSCL--EQIAPHNDQE 86
Query: 92 SGRVLMMLGKAQYELQKSADRYRTNIIHTITTPSESLLKELQTLEEMKQQCDMKRDAYET 151
SG +L+MLGK Q+EL+K D YR+ I TIT PSESLL +L+T+E+MKQQC+ KRD +
Sbjct: 87 SGGILLMLGKVQFELKKLVDTYRSQIFKTITRPSESLLSDLRTVEDMKQQCEEKRDVVKH 146
Query: 152 MRASY-SDKGGSRHSKTESFSTEQLDASFLEYQEDSALFTFRLKSLKQGQFQSLLTQAAR 210
M + DK + +K E QL+ + E Q+++ L FRLKSLK+GQ +SLLTQAAR
Sbjct: 147 MLMEHVKDKVQVKGTKGERLIRRQLETARDELQDEATLCIFRLKSLKEGQARSLLTQAAR 206
Query: 211 HHAAQLSFFRKGLKCLEALEPRVKAISEKHHIDYNFS--GLEDDGSDNDGYSTYDSCSDD 268
HH AQ+ F GLK LEA+E V+ +++ HID S G E D S+++ + D
Sbjct: 207 HHTAQMHMFFAGLKSLEAVEQHVRIAADRQHIDCVLSDPGNEMDCSEDNDDDDR-LVNRD 265
Query: 269 GELSFDYEINDRDQDFL-TSRGSMDFDKSDQT-TSPKPIXXXXXXXXXXXXXXIVFPQLK 326
GELSFDY +++ + + T GSM D +D + P P + +
Sbjct: 266 GELSFDYITSEQRVEVISTPHGSMKMDDTDLSFQRPSPAGSATVNADPREEHSVSNRDRR 325
Query: 327 PEFATHSAPLFAGNLLDETDR-LRQMRPSSTKHSYRLPTPVGADNPVPSGSHRLHHSAQF 385
++HSAPLF D DR +RQM PS+ ++Y LPTPV + S+
Sbjct: 326 --TSSHSAPLFPDKKADLADRSMRQMTPSA--NAYILPTPVDSK------------SSPI 369
Query: 386 FETKPHAPTN----LWHSSPLT------KDYNGAMHNAATKPXXXXXTDDLKKLKRESWS 435
F TKP TN LWHSSPL KD +++ +P + LK S
Sbjct: 370 F-TKPVTQTNHSANLWHSSPLEPIKTAHKDAESNLYSRLPRPSEHAFSGPLKP---SSTR 425
Query: 436 GPIPIKAGSGGKPFSQADHRPSPTMAYPGAMPAAKPHVRHXXXXXXXXXXXXXXXXXXXX 495
P+P+ + + R SPT + P A + P
Sbjct: 426 LPVPVAVQA-----QSSSPRISPTASPPLA---SSP------------------------ 453
Query: 496 XXLKISELHLLPLPPANVDPVRPS---GLVGYSGPLVS 530
+I+ELH LP PP P R S GLVG+S PL +
Sbjct: 454 ---RINELHELPRPPGQFAPPRRSKSPGLVGHSAPLTA 488
>AT3G26910.2 | chr3:9915304-9918511 REVERSE LENGTH=615
Length = 614
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 198/575 (34%), Positives = 286/575 (49%), Gaps = 55/575 (9%)
Query: 33 KLDELADAAQDVEEMRNCYDGFISAAAATTNGVYEFAEALEELGSCLLAKPVLNDDDDDS 92
++DEL A +D+++MR CYD ++AAAAT N YEF+E+L E+GSCL + + +D++S
Sbjct: 31 QIDELDRAGKDMQDMRECYDRLLAAAAATANSAYEFSESLGEMGSCL--EQIAPHNDEES 88
Query: 93 GRVLMMLGKAQYELQKSADRYRTNIIHTITTPSESLLKELQTLEEMKQQCDMKRDAYETM 152
R+L MLGK Q ELQ+ D YR++I TIT+PSE+LLK+L+ +E+MKQQCD KR+ YE
Sbjct: 89 SRILFMLGKVQSELQRLLDTYRSHIFETITSPSEALLKDLRYVEDMKQQCDGKRNVYEM- 147
Query: 153 RASYSDKGGSRHSKTESFSTEQLDASFLEYQEDSALFTFRLKSLKQGQFQSLLTQAARHH 212
+ +KG + SK E + ++ E+ +++ + FRLKSLK+GQ +SLL QA RHH
Sbjct: 148 -SLVKEKGRPKSSKGERHIPPESRPAYSEFHDEATMCIFRLKSLKEGQARSLLIQAVRHH 206
Query: 213 AAQLSFFRKGLKCLEALEPRVKAISEKHHIDYNFS--GLEDDGS-DNDGYSTYDSCSDDG 269
AQ+ F GLK LEA+E VK EK HID + S G E + S D+D Y + +G
Sbjct: 207 TAQMRLFHTGLKSLEAVERHVKVAVEKQHIDCDLSVHGNEMEASEDDDDDGRY--MNREG 264
Query: 270 ELSFDYEINDR--DQDFLTSRGSMDFDKSDQTTSPKPIXXXXXXXXXXXXXXIVFPQLKP 327
ELSFDY N++ + L++ + D +D + P+P
Sbjct: 265 ELSFDYRTNEQKVEASSLSTPWATKMDDTD-LSFPRPSTTRPAAVNADHREEYPVSTRDK 323
Query: 328 EFATHSAPLFAGNLLDETDRLRQMRPSSTKHSYRLPTPVGADNPVPSGSHRLHHSAQFFE 387
++HSAPLF D ++RLRQ PS ++Y LPTP + P +Q
Sbjct: 324 YLSSHSAPLFPEKKPDVSERLRQANPSF--NAYVLPTPNDSRYSKP--------VSQALN 373
Query: 388 TKP--HAPTNLWHSSPLT-----KDYNGAMHNAATKPXXXXXTDDL-----KKLKRESWS 435
+P H+ N+WHSSPL KD A N+ T D + R ++S
Sbjct: 374 PRPTNHSAGNIWHSSPLEPIKSGKDGKDAESNSFYGRLPRPSTTDTHHHQQQAAGRHAFS 433
Query: 436 GPIPIKAGSGGKPFSQADHRPSPTMAYPGAM-PAAKPHVRHXXXXXXXXXXXXXXXXXXX 494
GP+ S KP + AD +Y GA P P V
Sbjct: 434 GPL---RPSSTKPITMAD-------SYSGAFCPLPTPPVLQSHPHSSSSPRVSPTASPPP 483
Query: 495 XXXLKISELHLLPLPPANVDP----VRPSGLVGYSGPLVS---KRAPTPARASPKXXXXX 547
+++ELH LP PP + P + GLVG+S PL + +R+
Sbjct: 484 ASSPRLNELHELPRPPGHFAPPPRRAKSPGLVGHSAPLTAWNQERSTVTVAVPSATNIVA 543
Query: 548 XXXXXXXXXXXXXYSIPSNSQRTPIITVNKLLEAK 582
YSIPS +QR + +L+E +
Sbjct: 544 SPLPVPPLVVPRSYSIPSRNQR---VVSQRLVERR 575
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.130 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,948,637
Number of extensions: 552633
Number of successful extensions: 1339
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1325
Number of HSP's successfully gapped: 3
Length of query: 623
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 518
Effective length of database: 8,227,889
Effective search space: 4262046502
Effective search space used: 4262046502
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 115 (48.9 bits)