BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0504800 Os02g0504800|AK069683
(322 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G02630.1 | chr3:562164-564524 FORWARD LENGTH=397 337 6e-93
AT2G43710.2 | chr2:18120107-18122495 FORWARD LENGTH=402 337 6e-93
AT5G16240.1 | chr5:5306981-5309639 FORWARD LENGTH=395 326 1e-89
AT5G16230.1 | chr5:5303394-5305944 FORWARD LENGTH=402 310 7e-85
AT3G02610.1 | chr3:555665-557458 FORWARD LENGTH=414 309 1e-84
AT3G02620.1 | chr3:560256-561760 FORWARD LENGTH=404 296 8e-81
AT1G43800.1 | chr1:16577662-16579549 FORWARD LENGTH=392 296 1e-80
>AT3G02630.1 | chr3:562164-564524 FORWARD LENGTH=397
Length = 396
Score = 337 bits (864), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 163/250 (65%), Positives = 191/250 (76%), Gaps = 3/250 (1%)
Query: 12 PCSMRRRTSGGGASVSPVVAMASTAGVGGIGNPTPRGKKPFAPWREVPPQVTHTLPPEKK 71
P S R S S V+MAST + G+K + P REV QV H++PP+K
Sbjct: 12 PSSYVYRPCQARGSRSSRVSMAST--IRSATTEVTNGRKLYIPPREVHVQVKHSMPPQKL 69
Query: 72 EVFDSLEGWAADTILPYLKPVEESWQPQDHLPDPRSPSFGDEVAALRERAAGLPDDHLVC 131
E+F SLEGWA +T+L YLKPVE+SWQP D LP+P S F D+V LRER LPDD+ V
Sbjct: 70 EIFKSLEGWADETLLTYLKPVEKSWQPTDFLPEPESEGFYDQVKELRERCKELPDDYFVV 129
Query: 132 LVGDMVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVWTRAWAAEENRHGDLMNKYLYL 191
LVGDM+TEEALPTYQTMLNT+DG VRDETGA + WA+WTRAW AEENRHGDL+NKYLYL
Sbjct: 130 LVGDMITEEALPTYQTMLNTLDG-VRDETGASPTPWAIWTRAWTAEENRHGDLLNKYLYL 188
Query: 192 TGRVDMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTTFQERATSISHGNTARHAGRHGDA 251
+GRVDMRQ+EKTIQYLIGSGMDP+TEN+PY+GFIYT+FQERAT ISHGNTAR A GD
Sbjct: 189 SGRVDMRQIEKTIQYLIGSGMDPKTENNPYLGFIYTSFQERATFISHGNTARLAKDRGDL 248
Query: 252 ALARVCGTVA 261
LA++CGT+A
Sbjct: 249 KLAQICGTIA 258
>AT2G43710.2 | chr2:18120107-18122495 FORWARD LENGTH=402
Length = 401
Score = 337 bits (863), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 155/213 (72%), Positives = 180/213 (84%), Gaps = 1/213 (0%)
Query: 49 KKPFAPWREVPPQVTHTLPPEKKEVFDSLEGWAADTILPYLKPVEESWQPQDHLPDPRSP 108
KKPF P REV QV H++PP+K E+F S+E WA + +L +LK VE+SWQPQD LPDP S
Sbjct: 53 KKPFTPPREVHVQVLHSMPPQKIEIFKSMENWAEENLLIHLKDVEKSWQPQDFLPDPASD 112
Query: 109 SFGDEVAALRERAAGLPDDHLVCLVGDMVTEEALPTYQTMLNTMDGGVRDETGAGGSAWA 168
F D+V LRERA LPDD+ V LVGDM+TEEALPTYQTMLNT+DG VRDETGA ++WA
Sbjct: 113 GFEDQVRELRERARELPDDYFVVLVGDMITEEALPTYQTMLNTLDG-VRDETGASPTSWA 171
Query: 169 VWTRAWAAEENRHGDLMNKYLYLTGRVDMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTT 228
+WTRAW AEENRHGDL+NKYLYL+GRVDMRQ+EKTIQYLIGSGMDPRTEN+PY+GFIYT+
Sbjct: 172 IWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENNPYLGFIYTS 231
Query: 229 FQERATSISHGNTARHAGRHGDAALARVCGTVA 261
FQERAT ISHGNTAR A HGD LA++CGT+A
Sbjct: 232 FQERATFISHGNTARQAKEHGDIKLAQICGTIA 264
>AT5G16240.1 | chr5:5306981-5309639 FORWARD LENGTH=395
Length = 394
Score = 326 bits (835), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 151/220 (68%), Positives = 179/220 (81%), Gaps = 1/220 (0%)
Query: 42 GNPTPRGKKPFAPWREVPPQVTHTLPPEKKEVFDSLEGWAADTILPYLKPVEESWQPQDH 101
+ T G+K + P REV QV +++PP+K E+F SLEGWA D +L YLKPVE+SWQP D
Sbjct: 38 SDSTAVGRKLYIPPREVHLQVKYSMPPQKLEIFKSLEGWANDNLLAYLKPVEKSWQPTDF 97
Query: 102 LPDPRSPSFGDEVAALRERAAGLPDDHLVCLVGDMVTEEALPTYQTMLNTMDGGVRDETG 161
LP+P S F D+V LRER L DD+L+ LVGDM+TEEALPTYQTM+NT+DG VRDETG
Sbjct: 98 LPEPESEGFYDQVKELRERCKELSDDYLIVLVGDMITEEALPTYQTMINTLDG-VRDETG 156
Query: 162 AGGSAWAVWTRAWAAEENRHGDLMNKYLYLTGRVDMRQVEKTIQYLIGSGMDPRTENDPY 221
A + WAVWTRAW AEENRHGDL+NKYLYL+GRVDMRQ+EKTIQYLIGSGMDP+TEN+PY
Sbjct: 157 ASPTPWAVWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPKTENNPY 216
Query: 222 MGFIYTTFQERATSISHGNTARHAGRHGDAALARVCGTVA 261
+GFIYT+FQERAT ISHGNTAR A GD L ++CGT+A
Sbjct: 217 LGFIYTSFQERATFISHGNTARLAKDLGDLTLGKICGTIA 256
>AT5G16230.1 | chr5:5303394-5305944 FORWARD LENGTH=402
Length = 401
Score = 310 bits (794), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 167/211 (79%), Gaps = 2/211 (0%)
Query: 52 FAPWREVPPQVTHTLPPEKKEVFDSLEGWAADTILPYLKPVEESWQPQDHLPDPRSP-SF 110
F P +EV Q+THT+P EK E+F S+E WA +LPYLKPVE+SWQPQD LP P + F
Sbjct: 52 FRPIKEVNNQLTHTIPQEKLEIFKSMENWAEQKLLPYLKPVEDSWQPQDFLPAPENDDEF 111
Query: 111 GDEVAALRERAAGLPDDHLVCLVGDMVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVW 170
D V +RER +PDD+ V LVGDM+TEEALPTYQT LNT+DG V+DETG S WAVW
Sbjct: 112 YDRVKEIRERTKEIPDDYFVVLVGDMITEEALPTYQTTLNTLDG-VKDETGGSLSPWAVW 170
Query: 171 TRAWAAEENRHGDLMNKYLYLTGRVDMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTTFQ 230
RAW AEENRHGDL+NKYLYLTGRVDMR VEKTIQYLIGSGMD + EN+PY GFIYT+FQ
Sbjct: 171 IRAWTAEENRHGDLLNKYLYLTGRVDMRHVEKTIQYLIGSGMDSKFENNPYNGFIYTSFQ 230
Query: 231 ERATSISHGNTARHAGRHGDAALARVCGTVA 261
ERAT ISHGNTAR A +GD LA++CGT+A
Sbjct: 231 ERATFISHGNTARLATTYGDVTLAKICGTIA 261
>AT3G02610.1 | chr3:555665-557458 FORWARD LENGTH=414
Length = 413
Score = 309 bits (792), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 149/246 (60%), Positives = 178/246 (72%), Gaps = 3/246 (1%)
Query: 18 RTSGGGASVSP-VVAMASTAGVGGIGNPTPRGKKPFAPWREVPPQVTHTLPPEKKEVFDS 76
RT+ G+S SP + S KK F P +EVP QVTHT+ EK E+F S
Sbjct: 27 RTTCLGSSFSPPRLLRVSCVATNPSKTSEETDKKKFRPIKEVPNQVTHTITQEKLEIFKS 86
Query: 77 LEGWAADTILPYLKPVEESWQPQDHLPDPRSPS-FGDEVAALRERAAGLPDDHLVCLVGD 135
+E WA + +L YLKPVE SWQPQD LP+ F ++V LR+R +PDD+ V LVGD
Sbjct: 87 MENWAQENLLSYLKPVEASWQPQDFLPETNDEDRFYEQVKELRDRTKEIPDDYFVVLVGD 146
Query: 136 MVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVWTRAWAAEENRHGDLMNKYLYLTGRV 195
M+TEEALPTYQT LNT+DG V+DETG + WAVW RAW AEENRHGDL+NKYLYL+GRV
Sbjct: 147 MITEEALPTYQTTLNTLDG-VKDETGGSLTPWAVWVRAWTAEENRHGDLLNKYLYLSGRV 205
Query: 196 DMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTTFQERATSISHGNTARHAGRHGDAALAR 255
DMR VEKTIQYLIGSGMD + EN+PY GFIYT+FQERAT ISHGNTA+ A +GD LA+
Sbjct: 206 DMRHVEKTIQYLIGSGMDSKFENNPYNGFIYTSFQERATFISHGNTAKLATTYGDTTLAK 265
Query: 256 VCGTVA 261
+CGT+A
Sbjct: 266 ICGTIA 271
>AT3G02620.1 | chr3:560256-561760 FORWARD LENGTH=404
Length = 403
Score = 296 bits (759), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 135/213 (63%), Positives = 165/213 (77%), Gaps = 2/213 (0%)
Query: 50 KPFAPWREVPPQVTHTLPPEKKEVFDSLEGWAADTILPYLKPVEESWQPQDHLPDPRSPS 109
K F P +EV QVTHT+ EK E+F S+E WA + +L YLKPVE SWQPQD LP+ +
Sbjct: 50 KTFRPIKEVSNQVTHTITQEKLEIFKSMENWAQENLLSYLKPVETSWQPQDFLPETKDED 109
Query: 110 -FGDEVAALRERAAGLPDDHLVCLVGDMVTEEALPTYQTMLNTMDGGVRDETGAGGSAWA 168
F ++V LR+R +PDD+ V LVGDM+TEEALPTYQT++NT+DG +DETG + WA
Sbjct: 110 RFYEQVKELRDRTKEIPDDYFVVLVGDMITEEALPTYQTVMNTLDGA-KDETGVSLTPWA 168
Query: 169 VWTRAWAAEENRHGDLMNKYLYLTGRVDMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTT 228
VW RAW AEENRHGDL+NKYLYL+GRVD R VEKTIQYLIGSGMD + EN+PY G+IYT+
Sbjct: 169 VWLRAWTAEENRHGDLLNKYLYLSGRVDTRHVEKTIQYLIGSGMDTKYENNPYNGYIYTS 228
Query: 229 FQERATSISHGNTARHAGRHGDAALARVCGTVA 261
FQERAT ISH NTA+ A +GD LA++CGT+A
Sbjct: 229 FQERATFISHANTAKLATTYGDTTLAKICGTIA 261
>AT1G43800.1 | chr1:16577662-16579549 FORWARD LENGTH=392
Length = 391
Score = 296 bits (757), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 138/200 (69%), Positives = 162/200 (81%), Gaps = 3/200 (1%)
Query: 64 HTLPPEKKEVFDSLEGWAADTILPYLKPVEESWQPQDHLPDPRSP--SFGDEVAALRERA 121
HT+PPEK E+F SL+GWA D ILP LKPV++ WQP LPDP P F D+V LRER
Sbjct: 53 HTMPPEKMEIFKSLDGWAKDQILPLLKPVDQCWQPASFLPDPALPFSEFTDQVRELRERT 112
Query: 122 AGLPDDHLVCLVGDMVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVWTRAWAAEENRH 181
A LPD++ V LVGDM+TE+ALPTYQTM+NT+DG VRDETGA SAWA WTRAW AEENRH
Sbjct: 113 ASLPDEYFVVLVGDMITEDALPTYQTMINTLDG-VRDETGASESAWASWTRAWTAEENRH 171
Query: 182 GDLMNKYLYLTGRVDMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTTFQERATSISHGNT 241
GDL+ YLYL+GRVDM VE+T+Q+LIGSGMDP TEN+PY+GF+YT+FQERAT +SHGNT
Sbjct: 172 GDLLRTYLYLSGRVDMLMVERTVQHLIGSGMDPGTENNPYLGFVYTSFQERATFVSHGNT 231
Query: 242 ARHAGRHGDAALARVCGTVA 261
AR A GD LAR+CGT+A
Sbjct: 232 ARLAKSAGDPVLARICGTIA 251
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.135 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,636,120
Number of extensions: 347633
Number of successful extensions: 863
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 852
Number of HSP's successfully gapped: 7
Length of query: 322
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 223
Effective length of database: 8,392,385
Effective search space: 1871501855
Effective search space used: 1871501855
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)