BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0475300 Os02g0475300|AK120516
(634 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G14780.1 | chr1:5091020-5093873 FORWARD LENGTH=628 467 e-132
AT4G24290.2 | chr4:12594856-12597815 FORWARD LENGTH=607 443 e-124
AT1G28380.1 | chr1:9963696-9966060 FORWARD LENGTH=613 398 e-111
AT1G29690.1 | chr1:10379310-10381861 REVERSE LENGTH=562 360 1e-99
>AT1G14780.1 | chr1:5091020-5093873 FORWARD LENGTH=628
Length = 627
Score = 467 bits (1202), Expect = e-132, Method: Compositional matrix adjust.
Identities = 264/626 (42%), Positives = 351/626 (56%), Gaps = 28/626 (4%)
Query: 2 EVGERAAMALGAGFDLTSDFRLKFAKEGRLVELDEXXXXXXXXXXXXXXXXXXXXXXXXX 61
+V E A +LG GFDLT+DFRLK+ K+G D+
Sbjct: 7 DVIETAVKSLGKGFDLTADFRLKYCKDGDGSAGDDRLVVLDQTQNRELHIPGFGVFQNVS 66
Query: 62 XDVGVDKGDRIRFRSDVLEFNQMSELLNQKSSVQGKVPSGYFNTLFDL-SGAWMTDAKET 120
D+ DKG+R RFRSD+L+FN+MSE NQ+SSV GK+PSG FN F SG+W TDA
Sbjct: 67 ADINCDKGERTRFRSDILDFNKMSEYFNQRSSVTGKIPSGNFNATFGFQSGSWATDAANV 126
Query: 121 KHLAFDGYFISLYKLHLKT-SPLVLRDEVRSAVPPKWDPAALSRFIKTYGTHIIVEMAVG 179
K L D ++L+ LH+ + L L D VR+AVP WDP L+RFI+ YGTH+I ++VG
Sbjct: 127 KSLGLDASVVTLFNLHIHNPNRLRLTDRVRNAVPSSWDPQLLARFIERYGTHVITGVSVG 186
Query: 180 GQDVICVKQSPSSTISSADLKLHLEDLGDFLF------SDGRNHSPIHRKTRDGKSKVPD 233
GQDV+ V+Q SS + + L+ HL DLGD LF S R + H + K P+
Sbjct: 187 GQDVVVVRQDKSSDLDNDLLRHHLYDLGDQLFTGSCLLSTRRLNKAYHHS--HSQPKFPE 244
Query: 234 VFVRMEQQPNNLHLSSYSESSTKDGLTITCSKRGGDASIASHSKWLQTVPRVPDAIMFKF 293
F + + + +++S +S ++G+T+ C+KRGGD SHS+WL TVP PDAI F F
Sbjct: 245 AFNVFDDK-QTVAFNNFSINS-QNGITVICAKRGGDGRAKSHSEWLITVPDKPDAINFNF 302
Query: 294 VPITSLLTGIPGSGYLSHAINLYLRYKPDPEDLQHFLEFQVPLQWAPLFNELILGPQKRK 353
+PITSLL +PGSG LSHA++LYLRYKP DLQ+FL+F P WAP+ N+L G
Sbjct: 303 IPITSLLKDVPGSGLLSHAMSLYLRYKPPLMDLQYFLDFSGPRAWAPVHNDLPFGAAPNM 362
Query: 354 GS-YPSLQFRFLGPKLQVSTSQVSSSHKPVVGLRLYLEGRKCNRLAIHVQHLXXXXXXXX 412
S YP+L F+GPKL V+T+ V+S PV G+R +LEG+KCNRLAIH+QHL
Sbjct: 363 ASAYPALHINFMGPKLYVNTTPVTSEKNPVTGMRFFLEGKKCNRLAIHLQHLDNTRTTVG 422
Query: 413 XXXXXXXXXXXXXXXVGAG-YIEPIQWKSYSCVCTSKVDYNPEWLKRVPGGRG----VFV 467
Y EP+ K +S VCT V Y+P W+K + F+
Sbjct: 423 EKITDEHIWRGSDQITDNDRYFEPLNGKKFSHVCTVPVKYDPNWIKTTSNHKSQNDVAFI 482
Query: 468 VTGAQLVTKGTWSRKVLHLRLHYTHVPGCAIQRTEWAAAP-AASQRGXXXXXXXXXXXXX 526
VTGAQL K S+ VLHLRL YT V + + W P SQ+
Sbjct: 483 VTGAQLEVKKHGSKSVLHLRLRYTKVSDHYVVQNSWVHGPIGTSQKSGIFSSMSMPLTSG 542
Query: 527 XXQLQXXXXXXXXXXXXXXXXXLLNSGVYPDGPPVPLQSRKLLKFVDMSEVVKGPHDVPG 586
+L+SGV+P GPPVP + K++KFVD+S++ +GP PG
Sbjct: 543 SVH--------HNMIQKDKNEVVLDSGVFPGGPPVPANN-KIVKFVDLSQLCRGPQHSPG 593
Query: 587 HWLVTAAKLVKDGGKIGLNVKFALLN 612
HWLVT +L D GK+ L+VKFALL+
Sbjct: 594 HWLVTGVRLYLDKGKLCLHVKFALLH 619
>AT4G24290.2 | chr4:12594856-12597815 FORWARD LENGTH=607
Length = 606
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 253/617 (41%), Positives = 342/617 (55%), Gaps = 39/617 (6%)
Query: 2 EVGERAAMALGAGFDLTSDFRLKFAKEG----RLVELDEXXXXXXXXXXXXXXXXXXXXX 57
+ E A ++G G+DL D RLK+ K G RL+++ E
Sbjct: 9 KAAEVAIGSIGCGYDLAIDLRLKYCKGGSKDSRLLDIKEGDDNCEIVLPGGISIPNVSK- 67
Query: 58 XXXXXDVGVDKGDRIRFRSDVLEFNQMSELLNQKSSVQGKVPSGYFNTLFDLSGAWMTDA 117
+ DKG+R+RFRSD+L F QM+E NQ+ S+ GK+PSG FN +F+ S W DA
Sbjct: 68 -----SIKCDKGERMRFRSDILPFQQMAEQFNQELSLAGKIPSGLFNAMFEFSSCWQKDA 122
Query: 118 KETKHLAFDGYFISLYKLHLKTSPLVLRDEVRSAVPPKWDPAALSRFIKTYGTHIIVEMA 177
TK+LAFDG FISLY + L S ++LR+ V+ AVP WDPAAL+RFI YGTHIIV +
Sbjct: 123 AYTKNLAFDGVFISLYSVALDKSQVLLREHVKQAVPSTWDPAALARFIDIYGTHIIVSVK 182
Query: 178 VGGQDVICVKQSPSSTISSADLKLHLEDLGDFLFSDGRNHSPIHRKTRDGKSKVPDVFVR 237
+GG+DVI KQ SS + DL+ L+++ D F + S +H T + +
Sbjct: 183 MGGKDVIYAKQQHSSKLQPEDLQKRLKEVADKRFVEA---SVVH-NTGSERVQASSKVET 238
Query: 238 MEQQPNNLHLSSYSESSTKDGLTITCSKRGG-DASIASHSKWLQTVPRVPDAIMFKFVPI 296
EQ+ SS + K+ C +RGG D H++WLQTV PD I F+PI
Sbjct: 239 KEQRLRFADTSSLGSYANKEDYVFMCKRRGGNDNRNLMHNEWLQTVQMEPDVISMSFIPI 298
Query: 297 TSLLTGIPGSGYLSHAINLYLRYKPDPEDLQHFLEFQVPLQWAPLFNELILGPQKRKGSY 356
TSLL G+PGSG+LSHAINLYLRYKP E+L FLEFQ+P QWAP+F+EL LGPQ+++ S
Sbjct: 299 TSLLNGVPGSGFLSHAINLYLRYKPPIEELHQFLEFQLPRQWAPVFSELPLGPQRKQQSC 358
Query: 357 PSLQFRFLGPKLQVSTSQVSSSHKPVVGLRLYLEGRKCNRLAIHVQHLXXXXXXXXXXXX 416
SLQF F GPKL V+T+ V +P+ G+RLYLEGR+ NRLAIH+QHL
Sbjct: 359 ASLQFSFFGPKLYVNTTPVDVGKRPITGMRLYLEGRRSNRLAIHLQHLSSLPKIYQLEDD 418
Query: 417 XXXXXXXXXXXVGAGYIEPIQWKSYSCVCTSKVDYNPEWLKRVPGGRGVFVVTGAQLVTK 476
Y E + WK+YS VCT V+ + + + VVTGAQL +
Sbjct: 419 LNRSIRQESH--DRRYYEKVNWKNYSHVCTEPVESDDD----------LSVVTGAQLHVE 466
Query: 477 GTWSRKVLHLRLHYTHVPGCA-IQRTEWAAAPAASQRGXXXXXXXXXXXXXXXQLQXXXX 535
+ VL LRL ++ V G ++ +EW A + + L
Sbjct: 467 SHGFKNVLFLRLCFSRVVGATLVKNSEWDEAVGFAPKSGLIST-----------LISHHF 515
Query: 536 XXXXXXXXXXXXXLLNSGVYPDGPPVPLQSRKLLKFVDMSEVVKGPHDVPGHWLVTAAKL 595
+NS +YP GPPVP Q+ KLLKFVD SE+ +GP + PG+W+V+ A+L
Sbjct: 516 TAAQKPPPRPADVNINSAIYPGGPPVPTQAPKLLKFVDTSEMTRGPQESPGYWVVSGARL 575
Query: 596 VKDGGKIGLNVKFALLN 612
+ + GKI L VK++L
Sbjct: 576 LVEKGKISLKVKYSLFT 592
>AT1G28380.1 | chr1:9963696-9966060 FORWARD LENGTH=613
Length = 612
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 241/617 (39%), Positives = 320/617 (51%), Gaps = 35/617 (5%)
Query: 4 GERAAMALGAGFDLTSDFRLKFAKE----GRLVELDEXXXXXXXXXXXXXXXXXXXXXXX 59
E+A +G G+DL SD R K RLVE+D
Sbjct: 15 AEKAVSVIGLGYDLCSDVRFSACKTTPDGSRLVEIDPTRNRDLIFPGGIVVNNVSS---- 70
Query: 60 XXXDVGVDKGDRIRFRSDVLEFNQMSELLNQKSSVQGKVPSGYFNTLFDLSGAWMTDAKE 119
+ DKG+R R RSD+L FNQMSE NQ + GK+PSG FN +F S W DA
Sbjct: 71 ---SIKCDKGERTRLRSDILSFNQMSEKFNQDMCLSGKIPSGMFNNMFAFSKCWPKDASS 127
Query: 120 TKHLAFDGYFISLYKLHLKTSPLVLRDEVRSAVPPKWDPAALSRFIKTYGTHIIVEMAVG 179
K LA+DG+FISLY + + L LRDEV+ VP WD AAL+ FI+ YGTH++V + +G
Sbjct: 128 VKTLAYDGWFISLYSVEIVRKQLTLRDEVKREVPSSWDSAALAGFIEKYGTHVVVGVTMG 187
Query: 180 GQDVICVKQSPSSTISSADLKLHLEDLGDFLFSDGRNHSPIHRKTRDGKSKVPDVFVRME 239
G+DVI VKQ S +++ L+ GD F S GK K ++ ++
Sbjct: 188 GKDVIHVKQMRKSNHEPEEIQKMLKHWGDERFCVDPVESKSPASVYSGKPKEENL-LQWG 246
Query: 240 QQPNNLHLSSYSESSTK-DGLTITCSKRGGDASIASHSKWLQTVPRVPDAIMFKFVPITS 298
QP +SS TK + + C +RGG SH +WL TV + P+ I FVPITS
Sbjct: 247 LQPFGTSVSSAVVMHTKNEEIMRVCIRRGGVDLGQSHERWLSTVSQAPNVISMCFVPITS 306
Query: 299 LLTGIPGSGYLSHAINLYLRYKPDPEDLQHFLEFQVPLQWAPLFNELILGPQKRKGSYPS 358
LL+G+PG+G+LSHA+NLYLRYKP E+L FLEFQ+P QWAP++ +L LG ++ K S PS
Sbjct: 307 LLSGLPGTGFLSHAVNLYLRYKPPIEELHQFLEFQLPRQWAPVYGDLPLGLRRSKQSSPS 366
Query: 359 LQFRFLGPKLQVSTSQVSSSHKPVVGLRLYLEGRKCNRLAIHVQHLXXXXXXXXXXXXXX 418
LQF +GPKL V+TS+V S +PV GLR +LEG+K N LAIH+QHL
Sbjct: 367 LQFSLMGPKLYVNTSKVDSGERPVTGLRFFLEGKKGNHLAIHLQHL--SACPPSLHLSHD 424
Query: 419 XXXXXXXXXVGAGYIEPIQWKSYSCVCTSKVDYNPEWLKRVPGGRG---VFVVTGAQLVT 475
V GY P++W +S VCT V YN G R +VT A L
Sbjct: 425 DTYEPIEEPVEKGYYVPVKWGIFSHVCTYPVQYN--------GARSDDTASIVTKAWLEV 476
Query: 476 KGTWSRKVLHLRLHYTHVPGCAIQRTEWAAAPAASQRGXXXXXXXXXXXXXXXQLQXXXX 535
KG RKVL LRL ++ +++ W S++
Sbjct: 477 KGMGMRKVLFLRLGFSLDASAVTRKSCWDNLSTNSRKSGVFSMISTRLSTGLSPNPATTK 536
Query: 536 XXXXXXXXXXXXXLLNSGVYPDGPPVPLQSRKLLKFVDMSEVVKGPHDVPGHWLVTAAKL 595
+NS VYP GP P++ KLL VD EV++GP + PG+W+VT AKL
Sbjct: 537 PQSKID--------INSAVYPRGPSPPVKP-KLLSLVDTKEVMRGPEEQPGYWVVTGAKL 587
Query: 596 VKDGGKIGLNVKFALLN 612
+ GKI + K++LL
Sbjct: 588 CVEAGKISIKAKYSLLT 604
>AT1G29690.1 | chr1:10379310-10381861 REVERSE LENGTH=562
Length = 561
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 226/627 (36%), Positives = 315/627 (50%), Gaps = 109/627 (17%)
Query: 7 AAMALGAGFDLTSDFRLKFAKEG---RLVELDEXXXXXXXXXXXXXXXXXXXXXXXXXXD 63
A ALG GFD+TSD RL + K RLV ++E D
Sbjct: 24 AIQALGRGFDVTSDVRLLYCKGAPGSRLVRIEEGQNRDLELSHGFLLPNVPA-------D 76
Query: 64 VGVDKGDRIRFRSDVLEFNQMSELLNQKSSVQGKVPSGYFNTLFDLSGAWMTDAKETKHL 123
+ +G+ R V F++M+E N +S V+G +P G FN +F+ +G+W DA TK L
Sbjct: 77 IDCSRGNSGTQRISVCSFHEMAEEFNVRSGVKGNIPLGCFNAMFNYTGSWQVDAASTKSL 136
Query: 124 AFDGYFISLYKLHLKTSPLVLRDEVRSAVPPKWDPAALSRFIKTYGTHIIVEMAVGGQDV 183
A GYFI LY + L LVL +E+R AVP WDPA+L+ FI+ YGTHI+ + +GG+DV
Sbjct: 137 ALVGYFIPLYDVKLAKLTLVLHNEIRRAVPSSWDPASLASFIENYGTHIVTSVTIGGRDV 196
Query: 184 ICVKQSPSSTISSADLKLHLEDLGDFLFSDGRNHS---PIHRKTRDGKSKVPDVFVRMEQ 240
+ ++Q SS + ++++ ++ D+ F + + S P+ K +D
Sbjct: 197 VYIRQHQSSPLPVSEIENYVNDMIKHRFHEAESQSITGPLKYKDKD-------------- 242
Query: 241 QPNNLHLSSYSESSTKDGLTITCSKRGGDASIASHSKWLQTVPRVPDAIMFKFVPITSLL 300
+T+ +RGGD SH++W +TVP PD I F PI SLL
Sbjct: 243 ------------------ITVIFRRRGGDDLEQSHARWAETVPAAPDIINMTFTPIVSLL 284
Query: 301 TGIPGSGYLSHAINLYLRYKPDPEDLQHFLEFQVPLQWAPLFNELILGPQKRKGSYPSLQ 360
G+PG +L+ AI LYL YKP EDLQ+FL++Q+ WAP + L Q+++ SLQ
Sbjct: 285 EGVPGLRHLTRAIELYLEYKPPIEDLQYFLDYQIARAWAPEQSNL----QRKEPVCSSLQ 340
Query: 361 FRFLGPKLQVSTSQVSSSHKPVVGLRLYLEGRKCNRLAIHVQHLXXXXXXXX----XXXX 416
F +GPKL +S QV+ KPV GLRL LEG K NRL+IH+QHL
Sbjct: 341 FSLMGPKLFISADQVTVGRKPVTGLRLSLEGSKQNRLSIHLQHLVSLPKILQPHWDSHVP 400
Query: 417 XXXXXXXXXXXVGAGYIEPIQWKSYSCVCTSKVDYNPEWLKRVPGGRGVFVVTGAQLVTK 476
+ + EPI+WK++S V TS +++ + + GV +VTGAQL
Sbjct: 401 IGAPKWQGPEEQDSRWFEPIKWKNFSHVSTSPIEHTETHIGDL---SGVHIVTGAQL--- 454
Query: 477 GTW---SRKVLHLRLHYTHVPGCAIQRTEWAAAPAASQRGXXXXXXXXXXXXXXXQLQXX 533
G W S+ VLHL+L ++ VPGC I+R+ W P AS
Sbjct: 455 GVWDFGSKNVLHLKLLFSKVPGCTIRRSVWDHTPVAS----------------------- 491
Query: 534 XXXXXXXXXXXXXXXLLNSGVYPDGPPVPL-------QSRKLLKFVDMSEVVKGPHDVPG 586
+ + P GP QS KL K VD SE++KGP D+PG
Sbjct: 492 -----------------SGRLEPGGPSTSSSTEEVSGQSGKLAKIVDSSEMLKGPQDLPG 534
Query: 587 HWLVTAAKLVKDGGKIGLNVKFALLNY 613
HWLVT AKL + GKI L VK++LLNY
Sbjct: 535 HWLVTGAKLGVEKGKIVLRVKYSLLNY 561
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,708,315
Number of extensions: 502916
Number of successful extensions: 1048
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1030
Number of HSP's successfully gapped: 11
Length of query: 634
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 529
Effective length of database: 8,227,889
Effective search space: 4352553281
Effective search space used: 4352553281
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)