BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0474700 Os02g0474700|AK068629
         (675 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G31660.1  | chr2:13464519-13471353 FORWARD LENGTH=1041         973   0.0  
AT3G59020.2  | chr3:21810973-21817418 REVERSE LENGTH=1031         908   0.0  

>AT2G31660.1 | chr2:13464519-13471353 FORWARD LENGTH=1041
          Length = 1040

 Score =  973 bits (2516), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/675 (68%), Positives = 543/675 (80%), Gaps = 2/675 (0%)

Query: 1    MCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTAAMDFVSELVRKRGKSNLQKFIHFIV 60
            MCFNDNDQKLW+EDPHEYVRKGY+IIEDLYSPRTA+MDFV+ELVRKRGK NL KF+ F+V
Sbjct: 359  MCFNDNDQKLWEEDPHEYVRKGYNIIEDLYSPRTASMDFVNELVRKRGKENLPKFVKFVV 418

Query: 61   DIFRRYDEASIEIKPYRQKDGALLAIGTLCDKLKQTDPYKAELERMLVQHVFPEFNSHVG 120
            +IF  Y++A++E KPYRQKDGA+LA+G LCDKLKQTDPYK++LE MLVQH+FP+FNS VG
Sbjct: 419  EIFLSYEKATVEEKPYRQKDGAMLAVGALCDKLKQTDPYKSQLELMLVQHIFPDFNSPVG 478

Query: 121  HLRAKAAWVAGQYAHISFSDQDNFRKAMHCIVSGMRDPDLPVRVDSVFALRSFVEACKDL 180
            HLRAKAAWVAGQYAHI+FSDQ+NFRKA+H +VSG+RDPDLPVRVDSVFALRSFVEACKDL
Sbjct: 479  HLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPDLPVRVDSVFALRSFVEACKDL 538

Query: 181  NEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCM 240
            NEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAP+A GLCQNLAAAFWRC+
Sbjct: 539  NEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPFAFGLCQNLAAAFWRCL 598

Query: 241  XXXXXXXXXXXXXXXXXVGCLRAISTILESVSSLPHLFIQIEPTLLPIMRRMLTSDGQDV 300
                             VGCLRAISTILESVSSLP LF++IEPT+LPIM++MLT+DGQ+V
Sbjct: 599  NTSEANDDSDDMGALAAVGCLRAISTILESVSSLPQLFVEIEPTILPIMQKMLTTDGQEV 658

Query: 301  YEEVLEIVSYMTFFSPSISLDMWSLWPLMMEALNDWAIDFFENILVPLDNYVSRGSDHFL 360
            +EEVLEI SYMTF+SPSISLD+WSLWPLM+EAL DW IDFF NILVP+DN++SRG+ HFL
Sbjct: 659  FEEVLEIASYMTFYSPSISLDIWSLWPLMVEALVDWGIDFFPNILVPMDNFISRGTAHFL 718

Query: 361  ACKNPDYQQSLWSALSSIMMDQNMEDSDIEPAPKLIEVVFQNCKGNVDQWVEPYLSLTID 420
             CK PDYQQSL++ LS++M D+N+EDS+IE APKLIEVVFQNCKG VDQWVEPYL LT+D
Sbjct: 719  TCKEPDYQQSLYNVLSTLMTDRNIEDSEIESAPKLIEVVFQNCKGQVDQWVEPYLRLTVD 778

Query: 421  RLRRAHKPYLKCLLVQVIANAFYYNPSLTLATLHKLGAVTEIFNIWFGMLEQVKKSGVRA 480
            RL+RA   Y+K LL+QV+AN  YYNP LTL  LH  G  +++F++WF ML+Q +KSG+ A
Sbjct: 779  RLQRAETSYVKSLLIQVVANMLYYNPGLTLGVLHNTGLASKVFDLWFQMLQQKRKSGLPA 838

Query: 481  NFKREHDKKVCCLGLTSLISLPADHIPGEALNRIFKATLDLLVAYKEQVAESKKQXXXXX 540
            NFKREHDKKVCCLGLTSL++LP    P EAL R+F+ATLDLLVAYK Q+AE+ K+     
Sbjct: 839  NFKREHDKKVCCLGLTSLLALPGGQFPDEALQRVFRATLDLLVAYKNQLAEAAKETEVDY 898

Query: 541  XXXXXXXXXXXXXXXXXXXXXXMGLDEEDADEVNSLHLQKLAAEARGFQ-PAXXXXXXXX 599
                                  M  D E+ DE  S+ LQKLAA+A+ F            
Sbjct: 899  EEEMNGLQSSDDDYDDDGSDGEMD-DTEEGDEAQSVKLQKLAAQAKAFHYDDDDDDDSDD 957

Query: 600  XXXXXXXLQSPIDEVDPFILFVETVQGLQASDPIRFQSLMQTLDFRYQALASGIAQHAEE 659
                    QSPIDEVD F+ FV+ ++ +QASD  RFQ+L Q+LDF YQA+A+GIAQHAE 
Sbjct: 958  DFSDEDEFQSPIDEVDAFVFFVDAIRVMQASDAQRFQNLNQSLDFTYQAIANGIAQHAEL 1017

Query: 660  RRVEIEKEKLEKANA 674
            RRVEIEKEK +K  A
Sbjct: 1018 RRVEIEKEKQKKLAA 1032



>AT3G59020.2 | chr3:21810973-21817418 REVERSE LENGTH=1031
          Length = 1030

 Score =  908 bits (2346), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/675 (66%), Positives = 523/675 (77%), Gaps = 5/675 (0%)

Query: 1    MCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTAAMDFVSELVRKRGKSNLQKFIHFIV 60
            MCFNDNDQ LWDEDPHEYVRKGYDIIEDLYSPRTA+MDFV+ELVRKRGK N  KFI F+V
Sbjct: 355  MCFNDNDQMLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVTELVRKRGKENFPKFIQFVV 414

Query: 61   DIFRRYDEASIEIKPYRQKDGALLAIGTLCDKLKQTDPYKAELERMLVQHVFPEFNSHVG 120
            DIF+RY+EAS+E KPYR KDGALLA+GTLCDKL+QT+PYK+ELE MLVQHVFPEF+S  G
Sbjct: 415  DIFKRYNEASLENKPYRLKDGALLAVGTLCDKLRQTEPYKSELENMLVQHVFPEFSSPAG 474

Query: 121  HLRAKAAWVAGQYAHISFSDQDNFRKAMHCIVSGMRDPDLPVRVDSVFALRSFVEACKDL 180
            HLRAKAAWVAGQYA+I FSDQ NF KA+HC++SGM D +LPVRVDSVFALRSF+EACKDL
Sbjct: 475  HLRAKAAWVAGQYANIDFSDQSNFSKALHCVISGMCDLELPVRVDSVFALRSFIEACKDL 534

Query: 181  NEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCM 240
            +EIRP+LPQLLDEFFKLM EVENEDL FTLETIV KFGEE++PYALGLCQNLA+AFWRC+
Sbjct: 535  DEIRPVLPQLLDEFFKLMKEVENEDLAFTLETIVYKFGEEISPYALGLCQNLASAFWRCI 594

Query: 241  XXXXXXXXXXXXXXXXXVGCLRAISTILESVSSLPHLFIQIEPTLLPIMRRMLTSDGQDV 300
                             VGCLRAISTILES+SSLPHL+ QIEP LLPIMR+MLT+DGQDV
Sbjct: 595  DTDNGDDETDDAGALAAVGCLRAISTILESISSLPHLYGQIEPQLLPIMRKMLTTDGQDV 654

Query: 301  YEEVLEIVSYMTFFSPSISLDMWSLWPLMMEALNDWAIDFFENILVPLDNYVSRGSDHFL 360
            +EEVLEIVSY+T FSP+ISL+MWSLWPLMMEAL DWAIDFF NILVPL NY+SRG+ H+L
Sbjct: 655  FEEVLEIVSYITTFSPTISLEMWSLWPLMMEALVDWAIDFFPNILVPLHNYISRGTGHYL 714

Query: 361  ACKNPDYQQSLWSALSSIMMDQNMEDSDIEPAPKLIEVVFQNCKGNVDQWVEPYLSLTID 420
             CK PDYQQ+LW+ +S +M ++N++DSD+EPAPKL+ +V Q CKG VDQWVEPYL +T+D
Sbjct: 715  TCKEPDYQQNLWNVISVLMANKNIDDSDLEPAPKLLGIVLQTCKGQVDQWVEPYLRITLD 774

Query: 421  RLRRAHKPYLKCLLVQVIANAFYYNPSLTLATLHKLGAVTEIFNIWFGMLEQVKKSGVRA 480
            RLR A K   KCLLV+V+ANAFYYN  L L  L + G  TEIF +WF ML++ KKSG R+
Sbjct: 775  RLRGAEKSSFKCLLVEVVANAFYYNTPLALGILQRFGIATEIFTLWFQMLQEKKKSGARS 834

Query: 481  NFKREHDKKVCCLGLTSLISLPADHIPGEALNRIFKATLDLLVAYKEQVAESKKQXXXXX 540
            NFKREHDKKVC LGLTSL SLPA  +PGE L  +F+A L+LLVAYK+Q+AE+ K      
Sbjct: 835  NFKREHDKKVCILGLTSLFSLPAGQLPGEVLPHVFRALLELLVAYKDQLAEAAKAEEEEE 894

Query: 541  XXXXXXXXXXXXXXXXXXXXXXMGLDEEDADEVNSLHLQKLAAEARGFQP-AXXXXXXXX 599
                                       E+ DE +   L+KLAA+A+ F+  +        
Sbjct: 895  DEDGDDDDMDEFQTDDEDEDGDD----ENPDETDGSTLRKLAAQAKDFRSYSDDDDFSDD 950

Query: 600  XXXXXXXLQSPIDEVDPFILFVETVQGLQASDPIRFQSLMQTLDFRYQALASGIAQHAEE 659
                   L+SPIDEVDPF+LF++ V  +Q SD  RFQSL QTLD  Y  LAS IAQH E 
Sbjct: 951  DFSDDEELESPIDEVDPFVLFMDAVTAMQVSDSPRFQSLTQTLDPHYHGLASTIAQHTEL 1010

Query: 660  RRVEIEKEKLEKANA 674
            RR EI KEKLEK ++
Sbjct: 1011 RRAEILKEKLEKQSS 1025



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.137    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,318,284
Number of extensions: 526718
Number of successful extensions: 1321
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1316
Number of HSP's successfully gapped: 3
Length of query: 675
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 570
Effective length of database: 8,227,889
Effective search space: 4689896730
Effective search space used: 4689896730
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 115 (48.9 bits)