BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0469900 Os02g0469900|AK065847
(467 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G04880.1 | chr1:1376106-1378264 REVERSE LENGTH=449 275 3e-74
AT1G76110.1 | chr1:28555287-28557465 REVERSE LENGTH=339 209 3e-54
AT3G13350.1 | chr3:4335721-4337804 REVERSE LENGTH=320 198 7e-51
AT1G55650.1 | chr1:20796340-20798481 FORWARD LENGTH=338 162 3e-40
AT2G17410.1 | chr2:7559869-7563474 FORWARD LENGTH=787 54 2e-07
AT1G20910.1 | chr1:7277209-7280635 REVERSE LENGTH=399 52 1e-06
AT4G11080.1 | chr4:6760898-6763272 REVERSE LENGTH=447 50 3e-06
>AT1G04880.1 | chr1:1376106-1378264 REVERSE LENGTH=449
Length = 448
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/341 (43%), Positives = 206/341 (60%), Gaps = 25/341 (7%)
Query: 69 AGYKXXXXXXXXFRRALEGLHAQMGTKLKVPIIGGKDLDLHQLFKEVTSRGGIDKVKSDN 128
A Y+ F +LE LH+ +GTK VPIIGG+DLDLH+LF EVTSRGGI+K+ ++
Sbjct: 23 ATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILNER 82
Query: 129 RWREVTASFIFPATATNASFMLKKYYMSLLYHFERLYLFEAQGWYQETDSRSIS------ 182
RW+EVTA+F+FP TATNAS++L+KYY SLL ++E++Y F + G +S S
Sbjct: 83 RWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIPPDSMQSPSARPCFI 142
Query: 183 --CIEMKAEGQASRKRKRGSNSCSSDLAASL-DNDVQVIIDGKFEHGYIVTVIMGSKSTK 239
I E QA + + + L SL ++V +IDGKFE GY+VTV +GS+ K
Sbjct: 143 QGAIRPSQELQALTFTPQPKINTAEFLGGSLAGSNVVGVIDGKFESGYLVTVTIGSEQLK 202
Query: 240 AVLYNCTEEPAVPTAVP---HVAIDSAEGIXXXXXXXXKKLS------------TTDPNH 284
VLY + V P H + + I ++ DP+H
Sbjct: 203 GVLYQLLPQNTVSYQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRRRKKSEIKRRDPDH 262
Query: 285 PKPNRSGYNFFFQDQHRKLKPEYPGQDRLISKMIGERWNNLGPEDKAVYQEKGVEDKARY 344
PKPNRSGYNFFF +QH +LKP +PG+DR IS+MIGE WN L ++K +YQ K +EDK RY
Sbjct: 263 PKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKLIYQGKAMEDKERY 322
Query: 345 QRQLALYRE-QRTGQPISNAVPIQQRLPQKEVTIDEVDSKV 384
+ ++ YRE ++ GQ ISNAVP+QQRLP++ V + E D +
Sbjct: 323 RTEMEDYREKKKNGQLISNAVPLQQRLPEQNVDMAEADLPI 363
>AT1G76110.1 | chr1:28555287-28557465 REVERSE LENGTH=339
Length = 338
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 171/304 (56%), Gaps = 21/304 (6%)
Query: 64 YPARVAGYKXXXXXXXXFRRALEGLHAQMGTKLKVPIIGGKDLDLHQLFKEVTSRGGIDK 123
YP +A ++ F L H+ M TK +P+IGGK+LDLH L+ EVT RGG +K
Sbjct: 27 YPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEK 86
Query: 124 VKSDNRWREVTASFIFPATATNASFMLKKYYMSLLYHFERLYLFEAQG---------WYQ 174
V + +WREV F F AT T+ASF+L+K+Y++LL+H+E+++LF A+G
Sbjct: 87 VVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGPLLHPIATFHAN 146
Query: 175 ETDSRSISCIEMKAEGQASRKRKRGSNSCSSDLAASLDNDVQVIIDGKFEHGYIVTVIMG 234
+ S+ ++ +E S SS A I+GKF+ GY+V V +G
Sbjct: 147 PSTSKEMALVEYTPPSIRYHNTHPPSQGSSSFTAIG-------TIEGKFDCGYLVKVKLG 199
Query: 235 SKSTKAVLYNCTE--EPAVPTAVPHVAI---DSAEGIXXXXXXXXKKLSTTDPNHPKPNR 289
S+ VLY+ + + PTAV + A+ + DPN+PKPNR
Sbjct: 200 SEILNGVLYHSAQPGPSSSPTAVLNNAVVPYVETGRRRRRLGKRRRSRRREDPNYPKPNR 259
Query: 290 SGYNFFFQDQHRKLKPEYPGQDRLISKMIGERWNNLGPEDKAVYQEKGVEDKARYQRQLA 349
SGYNFFF ++H KLK YP ++R +K+IGE W+NL E++ VYQ+ G++DK RYQR+L
Sbjct: 260 SGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKERYQRELN 319
Query: 350 LYRE 353
YRE
Sbjct: 320 EYRE 323
>AT3G13350.1 | chr3:4335721-4337804 REVERSE LENGTH=320
Length = 319
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 158/273 (57%), Gaps = 21/273 (7%)
Query: 83 RALEGLHAQMGTKLKVPIIGGKDLDLHQLFKEVTSRGGIDKVKSDNRWREVTASFIFPAT 142
RA GL ++ LKVP +GG LDLH+LF EVTSRGGI++V D +W+EV +F FP T
Sbjct: 51 RAFLGLTSKT---LKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKWKEVIGAFSFPTT 107
Query: 143 ATNASFMLKKYYMSLLYHFERLYLFEAQGWYQETDSRSISCIEMKAEGQASRKRKRGSNS 202
T+ASF+L+KYY+ L+ E +Y E + +S ++ E S + +
Sbjct: 108 ITSASFVLRKYYLKFLFQLEHVYYLE----------KPVSSLQSTDEALKSLANESPNPE 157
Query: 203 CSSDLAASLDNDVQVIIDGKFEHGYIVTVIMGSKSTKAVLYNCTEEPA---VPTAVPHVA 259
D + +VQ IDGKF+ GY+VT+ +GS+ K VLY+ + P+ P
Sbjct: 158 EGID-EPQVGYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQTPSQSQQTMETPSAI 216
Query: 260 IDSAEGIXXXXXXXXKKLSTTDPNHPKPNRSGYNFFFQDQHRKLKPEYPGQDRLISKMIG 319
+ S++ KL+ D PK +RSGYNFFF +Q+ +LKPEY GQ+R I+K IG
Sbjct: 217 VQSSQ----RRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIG 272
Query: 320 ERWNNLGPEDKAVYQEKGVEDKARYQRQLALYR 352
W+NL +K VYQ+KGV+D RY+ ++ Y+
Sbjct: 273 HMWSNLTESEKQVYQDKGVKDVERYRIEMLEYK 305
>AT1G55650.1 | chr1:20796340-20798481 FORWARD LENGTH=338
Length = 337
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 148/289 (51%), Gaps = 42/289 (14%)
Query: 81 FRRALEGLHAQMGTKLKVPIIGGKDLDLHQLFKEVTSRGGIDKVKSDNRWREVTASFIFP 140
F L H K K+PI+GGK LDLH+LF EVTSRGG++KV D R +EV +F F
Sbjct: 40 FWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRCKEVIDAFNFK 99
Query: 141 ATATNASFMLKKYYMSLLYHFERLYLFEA---QGWYQETDSRSISCIEMKAEGQASRKRK 197
T TN++F+L+K Y+ +L+ FE LY F+A W +E +++ E A+R +
Sbjct: 100 TTITNSAFVLRKSYLKMLFEFEHLYYFQAPLSTFWEKE------KALKLLIEKSANRDKD 153
Query: 198 RGSNSCSSDLAASLDNDVQVIIDGKFEHGYIVTVIMGSKSTKAVLYNCTEEPAVPTAVPH 257
S +L + IIDGKFE GY+++ +GS+ K +LY H
Sbjct: 154 ------SQELKPG--TVITGIIDGKFESGYLISTKVGSEKLKGMLY-------------H 192
Query: 258 VAIDSAEGIXXXXXXXXKKLSTTDPNH--PKPNRSGYNFFFQDQHRKLKPEYPGQDRLIS 315
++ ++ G K S+ +H PK R+GYNFF +Q ++K E GQ
Sbjct: 193 ISPETKRG-------KKKAKSSQGDSHKPPKRQRTGYNFFVAEQSVRIKAENAGQKVSSP 245
Query: 316 KMIGERWNNLGPEDKAVYQEKGVEDKARYQRQLALYR---EQRTGQPIS 361
K G W NL D+ VY EK ED RY+ ++ YR E R + ++
Sbjct: 246 KNFGNMWTNLSESDRKVYYEKSREDGKRYKMEILQYRSLMESRVAEIVA 294
>AT2G17410.1 | chr2:7559869-7563474 FORWARD LENGTH=787
Length = 786
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%)
Query: 81 FRRALEGLHAQMGTKLKVPIIGGKDLDLHQLFKEVTSRGGIDKVKSDNRWREVTASFIFP 140
F + L+ + K P G+ L+ +L++ VT GG DKV WR+V SF P
Sbjct: 500 FMKELDSFFRERNMDFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTGSKLWRQVGESFRPP 559
Query: 141 ATATNASFMLKKYYMSLLYHFERLYLFEAQ 170
T T S+ + +Y L +ER + E +
Sbjct: 560 KTCTTVSWTFRGFYEKALLEYERHKVSEGE 589
>AT1G20910.1 | chr1:7277209-7280635 REVERSE LENGTH=399
Length = 398
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%)
Query: 81 FRRALEGLHAQMGTKLKVPIIGGKDLDLHQLFKEVTSRGGIDKVKSDNRWREVTASFIFP 140
F R +E + + + K P G+ L++ +L++ V + GG + V ++ WR+V SF P
Sbjct: 112 FLREVEAFYKESFLEFKPPKFYGQPLNILKLWRAVVNLGGYEVVTTNKLWRQVGESFNPP 171
Query: 141 ATATNASFMLKKYYMSLLYHFER 163
T T S+ + +Y L +E+
Sbjct: 172 KTCTTVSYTFRNFYEKALLEYEK 194
>AT4G11080.1 | chr4:6760898-6763272 REVERSE LENGTH=447
Length = 446
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 275 KKLSTTDPNHPKPNRSGYNFFFQDQHRKLKPEYPG-QDRLISKMIGERWNNLGPEDKAVY 333
KK DPN PK S Y F +D + + E+PG + ++ I +W LG E+K VY
Sbjct: 362 KKNENVDPNKPKKPTSSYFLFCKDARKSVLEEHPGINNSTVTAHISLKWMELGEEEKQVY 421
Query: 334 QEKGVEDKARYQRQLALYREQRTG 357
K E Y++++ Y + +T
Sbjct: 422 NSKAAELMEAYKKEVEEYNKTKTS 445
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.133 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,174,438
Number of extensions: 323517
Number of successful extensions: 602
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 592
Number of HSP's successfully gapped: 11
Length of query: 467
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 365
Effective length of database: 8,310,137
Effective search space: 3033200005
Effective search space used: 3033200005
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 113 (48.1 bits)