BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0465400 Os02g0465400|AK100199
         (450 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G50430.1  | chr1:18682175-18685555 REVERSE LENGTH=433          707   0.0  
AT3G52940.1  | chr3:19630369-19633112 REVERSE LENGTH=370          133   3e-31

>AT1G50430.1 | chr1:18682175-18685555 REVERSE LENGTH=433
          Length = 432

 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/429 (79%), Positives = 370/429 (86%), Gaps = 1/429 (0%)

Query: 22  VHSALVTYASMLSLLSLCPPFVILLWYTMVHADGSVVRAYEHLREHGVLEGLKAIWPMPT 81
           VHS +VTYASMLSLL+ CPPFVILLWYTMVH DGSV + +    E+GV +GL  IWP PT
Sbjct: 5   VHSPIVTYASMLSLLAFCPPFVILLWYTMVHQDGSVTQTFGFFWENGV-QGLINIWPRPT 63

Query: 82  MAAWKIIFGFGLFEAALQLLLPGKRFEGPVSPSGNVPVYKANGLQAYAVTLITYLSLWWF 141
           + AWKIIF +G FEA LQLLLPGKR EGP+SP+GN PVYKANGL AY VTL TYL LWWF
Sbjct: 64  LIAWKIIFCYGAFEAILQLLLPGKRVEGPISPAGNRPVYKANGLAAYFVTLATYLGLWWF 123

Query: 142 GIFNPAIVYDHLGEIYSALVFGSFVFCIFLYIKGHLAPXXXXXXXXXNVIIDFYWGMELY 201
           GIFNPAIVYDHLGEI+SAL+FGSF+FC+ LYIKGH+AP         N+IIDFYWGMELY
Sbjct: 124 GIFNPAIVYDHLGEIFSALIFGSFIFCVLLYIKGHVAPSSSDSGSCGNLIIDFYWGMELY 183

Query: 202 PRIGKHFDIKVFTNCRFGMMSWAVLAVTYCIKQYEMNGRVADSMLVNTALMLIYVTKFFW 261
           PRIGK FDIKVFTNCRFGMMSWAVLAVTYCIKQYE+NG+V+DSMLVNT LML+YVTKFFW
Sbjct: 184 PRIGKSFDIKVFTNCRFGMMSWAVLAVTYCIKQYEINGKVSDSMLVNTILMLVYVTKFFW 243

Query: 262 WESGYWCTMDIAHDRAGFYICWGCLVWVPSIYTSPGMYLVNHPVNLGPQLALSILLAGIL 321
           WE+GYW TMDIAHDRAGFYICWGCLVWVPS+YTSPGMYLVNHPV LG QLA+ IL+AGIL
Sbjct: 244 WEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVELGTQLAIYILVAGIL 303

Query: 322 CIYINYDCDRQRQEFRRTNGKCSIWGKAPSKIVASYQTTNGETKXXXXXXXXXXXXXRHF 381
           CIYINYDCDRQRQEFRRTNGKC +WG+APSKIVASY TT+GETK             RHF
Sbjct: 304 CIYINYDCDRQRQEFRRTNGKCLVWGRAPSKIVASYTTTSGETKTSLLLTSGWWGLARHF 363

Query: 382 HYVPEILSAFFWTVPALFDHFLPYFYVIFLTILLFDRAKRDDDRCSSKYGKYWKMYCNKV 441
           HYVPEILSAFFWTVPALFD+FL YFYVIFLT+LLFDRAKRDDDRC SKYGKYWK+YC KV
Sbjct: 364 HYVPEILSAFFWTVPALFDNFLAYFYVIFLTLLLFDRAKRDDDRCRSKYGKYWKLYCEKV 423

Query: 442 PCRVIPGIY 450
             R+IPGIY
Sbjct: 424 KYRIIPGIY 432



>AT3G52940.1 | chr3:19630369-19633112 REVERSE LENGTH=370
          Length = 369

 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 187/380 (49%), Gaps = 29/380 (7%)

Query: 79  MPTMAAWKIIFGFGLFEAALQLLLPGKRFEGPVSPSGNVPVYKANGLQAYAVTLITYLSL 138
           +P++ +  ++  + ++ A    +LPGK   G +   G+   Y+ NGL A  + +      
Sbjct: 11  LPSLQSVYVLVFYFVYLAVAGEILPGKVIRGVLLSDGSQLRYRCNGLLALILLVAILGIC 70

Query: 139 WWFGIFNPAIVYDHLGEIYSALVFGSFVFCIF----LYIKGHLAPXXXXXX---XXXNVI 191
              GI +P +V D   E+ SA    +F+FC+     LY+ G  +             N++
Sbjct: 71  AKLGIVSPLVVADRGLELLSA----TFIFCVLVTLALYVTGRSSSNKGSSLKPHVSGNLV 126

Query: 192 IDFYWGMELYPRIGKHFDIKVFTNCRFGMMSWAVLAVTYCIKQYEMNGRVADSMLVNTAL 251
            D+++G++L P+     D+K F   R GMM W ++ ++   K  + +G ++ SM++    
Sbjct: 127 HDWWFGIQLNPQF-MSIDLKFFF-VRAGMMGWLLINLSILAKSVQ-DGSLSQSMILYQIF 183

Query: 252 MLIYVTKFFWWESGYWCTMDIAHDRAGFYICWGCLVWVPSIYTSPGMYLVNHPVNLG-PQ 310
             +Y+  +F  E     T DI  +R GF + +G L+W+P  ++  G +L+++ V L  P 
Sbjct: 184 CALYILDYFVHEEYMTSTWDIIAERLGFMLVFGDLLWIPFTFSIQGWWLLHNKVELTVPA 243

Query: 311 LALSILLAGILCIYINYDCDRQRQEFRRTNGKCSIWGKAPSKIVASYQTTNGETKXXXXX 370
           + ++ L+   L  Y+ +    +++   + N K  IWGK P  +V      +G        
Sbjct: 244 IVVNCLV--FLIGYMVFRGANKQKHIFKKNPKTPIWGKPPV-VVGGKLLVSG-------- 292

Query: 371 XXXXXXXXRHFHYVPEILSAFFWTVPALFDHFLPYFYVIFLTILLFDRAKRDDDRCSSKY 430
                   RH +Y+ +++ A  +++P      +PYFY I+L ILL  R +RD+ RC+ KY
Sbjct: 293 ---YWGIARHCNYLGDLMLALSFSLPCGISSPVPYFYPIYLLILLIWRERRDEVRCAEKY 349

Query: 431 GKYWKMYCNKVPCRVIPGIY 450
            + W  Y   VP R++P +Y
Sbjct: 350 KEIWAEYLRLVPWRILPYVY 369



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.330    0.144    0.493 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,473,047
Number of extensions: 386597
Number of successful extensions: 889
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 885
Number of HSP's successfully gapped: 2
Length of query: 450
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 348
Effective length of database: 8,310,137
Effective search space: 2891927676
Effective search space used: 2891927676
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 113 (48.1 bits)