BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0307000 Os02g0307000|AK069068
(1082 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G46070.1 | chr5:18683468-18688397 FORWARD LENGTH=1083 1077 0.0
AT1G03830.2 | chr1:962128-966622 REVERSE LENGTH=1014 239 5e-63
AT2G38840.1 | chr2:16227329-16232115 FORWARD LENGTH=603 145 2e-34
>AT5G46070.1 | chr5:18683468-18688397 FORWARD LENGTH=1083
Length = 1082
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/1035 (53%), Positives = 727/1035 (70%), Gaps = 19/1035 (1%)
Query: 55 LRLVYCDERGRFRMDPEAVAALQLVKGPVGVVSVCGRARQGKSFILNQLLGRSSGFQVAS 114
+RLVYCDE+G+FRMDPEAVA LQLVK P+GVVSVCGRARQGKSFILNQLLGRS+GFQVAS
Sbjct: 42 IRLVYCDEKGKFRMDPEAVATLQLVKEPIGVVSVCGRARQGKSFILNQLLGRSNGFQVAS 101
Query: 115 THRPCTKGLWMWSAPIKRTALDGTEYSLLLLDTEGIDAYDQTGTYSIQIFSLAVLLSSMF 174
TH+PCTKGLW+WS+PIKRTALDGTEY+LLLLD+EGIDAYDQTGTYS QIFSLAVLLSSMF
Sbjct: 102 THKPCTKGLWLWSSPIKRTALDGTEYNLLLLDSEGIDAYDQTGTYSTQIFSLAVLLSSMF 161
Query: 175 IYNQMGGIDEAALDRLSLVTEMTKHIRVRANGGKSTASELGQFSPIFIWLLRDFYLDLVE 234
+YNQMGGIDEA+LDRLSLVT+MTKHIRV+A+GG S+ SELGQFSPIF+WLLRDFYLDLVE
Sbjct: 162 VYNQMGGIDEASLDRLSLVTQMTKHIRVKASGGTSSRSELGQFSPIFVWLLRDFYLDLVE 221
Query: 235 NDRKITPRDYLEIALRPLEGRGKDISSKNEIRESIRALFPDRECFTLVRPLNSENELQRL 294
++RKI+PRDYLEIALRP++G G DI +KNEIR+SIRALFPDRECFTLVRPLN+E +LQRL
Sbjct: 222 DNRKISPRDYLEIALRPVQGSGGDIGAKNEIRDSIRALFPDRECFTLVRPLNNEKDLQRL 281
Query: 295 DQIPIEKLRPEFQAGLDELTRFILERTRPKQVAGTVMTGPVLAGVTQSFLDAINNGAVPT 354
DQI +EKLRPEF AGLD T+F+ E+TRPKQ+ GTVMTGP+L G+TQS+LDA+NNGAVPT
Sbjct: 282 DQISLEKLRPEFGAGLDAFTKFVFEKTRPKQLGGTVMTGPILVGITQSYLDALNNGAVPT 341
Query: 355 ISSSWQSVEEAECRRAYDSAAEVYLSAFDRTKQAEEDALRDAHEAALRKALEAYGTVAVG 414
I+SSWQSVEE ECRRAYDS E Y++AFD++K EE ALR+ HE A+RKAL + + AVG
Sbjct: 342 ITSSWQSVEETECRRAYDSGVEAYMAAFDQSKAPEEGALREEHEEAVRKALAIFNSNAVG 401
Query: 415 TGTSRMHYEKVLSNFCRKTFQEYKRNAFLEADKQCSNMIQIMERKLRAACSAPGVKVSNV 474
G++R +E +L +K F++YK+NAF+EAD +C++ IQ ME++LRAAC A + NV
Sbjct: 402 NGSARKKFEDLLHKDLKKKFEDYKKNAFMEADLRCTSTIQRMEKQLRAACHASNANMDNV 461
Query: 475 IQVLESLLTEYETSCSGPSKWRMLAAFLRQCLEGPILDLCLKLVNEAESERTSFALKYRS 534
++VLE+ L EYE SC GP KW+ L+ FL+Q LEGPI DL +L++ E+ S A+K+RS
Sbjct: 462 VKVLEARLAEYEASCHGPGKWQKLSVFLQQSLEGPIYDLTKRLIDSIAIEKNSLAMKFRS 521
Query: 535 NEDQLELLKRQLEANEAHKSEYLKRYEAAISEKQRVSEDHSAHLANLRTKCSTLDERCLS 594
ED ++ LK+QL+ +E +K EY KRY+ + ++K+++ + + + L+ + S+L+ERC +
Sbjct: 522 VEDAMKHLKQQLDDSERYKLEYQKRYDESNNDKKKLEDIYRERITKLQGENSSLNERCST 581
Query: 595 LSKELDLVRHECTDWRVKYEQYVTQQKAEQDGFISQLATLESRYSSAEGKLGXXXXXXXX 654
L K ++ + E +W Y+Q V +QKA Q+ S++ L +R +++E ++
Sbjct: 582 LVKTVESKKEEIKEWIRNYDQIVLKQKAVQEQLSSEMEVLRTRSTTSEARVAAAREQAKS 641
Query: 655 XXXXXTEWRDKYETXXXXXXXXLERLASVQEQINKIAHERESGIRAEFASHLEEKEEEMK 714
EW+ KY+ L++ ASVQE+ K RE +R EF+ L K+EE+
Sbjct: 642 AAEETKEWKRKYDYAVGEARSALQKAASVQERSGKETQLREDALREEFSITLANKDEEIT 701
Query: 715 RLVAKIRHAESEESVLAERLQVAESKAQSHNKETAALKDEIRELTGKLEFLRDRAVSFEK 774
K+ AE +VL L+VAESK +S E A+L+ + E+T KL+ +A+++EK
Sbjct: 702 EKATKLEKAEQSLTVLRSDLKVAESKLESFEVELASLRLTLSEMTDKLDSANKKALAYEK 761
Query: 775 QARMLEQEKNHLQEKFLSECXXXXXXXXXXXXXXXXXXXXTELSDVARTEAVTAQKEKDE 834
+A LEQEK +++K+ SE TEL+D ART+AVT+QKEK E
Sbjct: 762 EANKLEQEKIRMEQKYRSEFQRFDEVKERCKAAEIEAKRATELADKARTDAVTSQKEKSE 821
Query: 835 AQRLSMEKLAVIERIQRQVDRLEQEKVNLLDEVQKMHKSETDALSKVALLESRVAEREKE 894
+QRL+ME+LA IER +RQV+ LE++K +L DE+ ++ SE +A+SKV +LE+RV EREKE
Sbjct: 822 SQRLAMERLAQIERAERQVENLERQKTDLEDELDRLRVSEMEAVSKVTILEARVEEREKE 881
Query: 895 IEELMIQSNEQRSSTVHVLESLLSTXXXXXXXXXXXXXXXXXXXXXXXXKLDVLHQELTS 954
I L+ ++N QR+ V LE LL +D L QEL
Sbjct: 882 IGSLIKETNAQRAHNVKSLEKLLDEERKAHIAANRRAEALSLELQAAQAHVDNLQQELAQ 941
Query: 955 VRLVETALDSKLR--TTTHGKRLRENEVGMESVQDMDI----DRPERSRKRSKSNTSPLK 1008
RL ETALD+K+R +++HGKR R E V DMDI DR R+ KR++S
Sbjct: 942 ARLKETALDNKIRAASSSHGKRSR-----FEDVVDMDIGEGSDRILRTNKRARST----- 991
Query: 1009 HFQSEDGGSVHMGEDSVTVSTDT-KDGNPDGYKKLTIAKLKEELTKHGFGAQLLELKNPN 1067
+ +D G G++ D ++ + Y+KLT+ LK ELTK+ G LL + N
Sbjct: 992 --RGDDHGPTDEGDEDFQSHQDNGEEEEEEDYRKLTVQNLKHELTKYDCGHLLLNRGHQN 1049
Query: 1068 KKDILALYKKLVLGK 1082
KK+ILALY+ VL K
Sbjct: 1050 KKEILALYEAHVLPK 1064
>AT1G03830.2 | chr1:962128-966622 REVERSE LENGTH=1014
Length = 1013
Score = 239 bits (611), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 162/550 (29%), Positives = 291/550 (52%), Gaps = 20/550 (3%)
Query: 309 GLDELTRFILERTRPKQVAGTVMTGPVLAGVTQSFLDAINNGAVPTISSSWQSVEEAECR 368
G+D L +F+ ER RPKQ T++TGP LAG T++F + +NN VP ISS WQ+VEE E R
Sbjct: 210 GVDALMKFVSERVRPKQRGDTIVTGPPLAGFTKAFSENVNNNIVPKISSLWQTVEELEGR 269
Query: 369 RAYDSAAEVYLSAFDRTKQAEEDALRDAHEAALRKALEAYGTVAVGTGTSRMHYEKVLSN 428
RA D+A EVY+S+ +R++ +E L +AH A+ +AL A+ ++G + Y++ L +
Sbjct: 270 RARDTATEVYMSSLERSETPDESMLLEAHNKAVVEALTAFCESSIGNVEVKQKYKRDLWS 329
Query: 429 FCRKTFQEYKRNAFLEADKQCSNMIQIMERKLRAACSAPGVKVSNVIQVLESLLTEYETS 488
F K +++KR A +EA +C N I+ M +KL A + + ++I+ L++ + EYE S
Sbjct: 330 FFAKALEDHKRVANVEAYSRCCNAIEDMGKKLWALPCSQDANIGDMIKALDTAVAEYEAS 389
Query: 489 CSGPSKWRMLAAFLRQCLEGPILDLCLKLVNEAESERTSFALKYRSNEDQLELLKRQLEA 548
+GP KW+ L++FLR+ ++ ++ ++E SE + L+ +S E + LLK+QLE
Sbjct: 390 INGPMKWQKLSSFLRESVQDILVHRRGNQMDELMSENSKLKLQQQSLESTMNLLKKQLEG 449
Query: 549 NEAHKSEYLKRYEAAISEKQRVSEDHSAHLANLRTKCSTLDERCLSLSKELDLVRHECTD 608
E EY KRYE+AI + ++S+ + +L +KC ++ + +L + L R E ++
Sbjct: 450 REKMNKEYQKRYESAIDDICKLSDQFKNRINDLESKCKSIHDEHSNLMEVLGSTRLEASE 509
Query: 609 WRVKYEQYVTQQKAEQDGFISQLATLESRYSSAEGKLGXXXXXXXXXXXXXTEWRDKYET 668
W+ KYE + +++G + +++ + KL +W+ KYE
Sbjct: 510 WKRKYEGTL-----DENGVSNIRVGVDASITRCSNKL--------------IDWKIKYEN 550
Query: 669 XXXXXXXXLERLASVQEQINKIAHERESGIRAEFASHLEEKEEEMKRLVAKIRHAESEES 728
E++A+++E++ K A E G+RAEF+ L+EKE+ + AK+ E + +
Sbjct: 551 TVSEQKAVTEKIAAMEEKL-KQASTTEDGLRAEFSRVLDEKEKIITEKAAKLATLEQQLA 609
Query: 729 VLAERLQVAESKAQSHNKETAALKDEIRELTGKLEFLRDRAVSFEKQARMLEQEKNHLQE 788
L+ + K + E ++ ++ L K E ++ + E + L++EK+ L +
Sbjct: 610 STRAELKKSALKVDECSSEAKDVRLQMSLLNEKYESVKSASELLETETETLKREKDELDK 669
Query: 789 KFLSECXXXXXXXXXXXXXXXXXXXXTELSDVARTEAVTAQKEKDEAQRLSMEKLAVIER 848
K +L D + EA A+ +++ Q +E+ I+R
Sbjct: 670 KCHIHLEELEKLVLRLTNVESEALEAKKLVDSLKLEAEAARDNENKLQTSLVERCIEIDR 729
Query: 849 IQRQVDRLEQ 858
+ +++ LE+
Sbjct: 730 AKSRIEELEK 739
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 126/186 (67%), Gaps = 2/186 (1%)
Query: 55 LRLVYCDERGRFRMDPEAVAALQLVKGPVGVVSVCGRARQGKSFILNQLLGRSSGFQVAS 114
++LVY DE G+ + DPEA+ ALQ +KGPV VVS+ G+A QGKSFI NQLL RS GF+V +
Sbjct: 12 VQLVYVDENGKLKTDPEAIGALQKLKGPVAVVSLFGKALQGKSFIWNQLLSRSIGFEVQT 71
Query: 115 THRPCTKGLWMWSAPIKRTALDGTEYSLLLLDTEGIDAYDQTGTYSIQIFSLAVLLSSMF 174
HRPC +WMW P+KR + DGTEYSL+LLD E DA T++ QIFSLA+LLSS+F
Sbjct: 72 LHRPCNGDIWMWIEPVKRISEDGTEYSLVLLDVELEDAKSIPATHNSQIFSLAILLSSVF 131
Query: 175 IYNQMGGIDEAALDRLSLVTEMTKHIRVRANGGKSTASELGQFSPIFIWLLRDFYLDLVE 234
IY G+++ ALD LS + E+ K V +T ELGQFSP+F+ L+ D + VE
Sbjct: 132 IYGPTLGLNDIALD-LSRLLEIRKQDHV-GEAKDNTFFELGQFSPMFVQLMMDINSETVE 189
Query: 235 NDRKIT 240
+T
Sbjct: 190 GGEDVT 195
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 35/45 (77%)
Query: 1038 GYKKLTIAKLKEELTKHGFGAQLLELKNPNKKDILALYKKLVLGK 1082
G+ K T+ KL+ E+ +HGFGA+L+ LKNP K+D++ LY++ VL K
Sbjct: 969 GHSKYTMKKLRTEILEHGFGAELVGLKNPRKRDLVQLYERTVLRK 1013
>AT2G38840.1 | chr2:16227329-16232115 FORWARD LENGTH=603
Length = 602
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 204/443 (46%), Gaps = 41/443 (9%)
Query: 65 RFRMDPEAVAALQLVKGPVGVVSVCGRARQGKSFILNQLLGRSS--GFQVASTHRPCTKG 122
+ ++ E + A+ + P+ V+V G R GKSF+LNQLL S GF V TKG
Sbjct: 42 KLQLSREGLEAISRITTPISAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHMRDTKTKG 101
Query: 123 LWMWSAPIKRTALDGTEYSLLLLDTEGIDAYDQTGTYSIQIFSLAVLLSSMFIYNQMGGI 182
+W+W P++ +DG + S++ LDTEG ++ ++ Y +IF+LA ++SS+ IYN I
Sbjct: 102 IWVWGTPLE-LEIDGVKTSVIYLDTEGFESVGKSNVYDDRIFALATVMSSVLIYNLPETI 160
Query: 183 DEAALDRLSLVTEMTKHIRVRANGGKSTASELGQFSPI-FIWLL-RDFYLDLVENDRKIT 240
EA + RLS E+ + R G E F P +WL+ RDF + +
Sbjct: 161 READISRLSFAVELAEEFYGRVKG------EDVAFEPSKLLWLIQRDFL-------QGKS 207
Query: 241 PRDYLEIALR--PLEGRGKDISSKNEIRESIRALFPDRECFTLVRPLNSENELQRLDQIP 298
+ ++ ALR P E K+I N+IR+S+ + + F+L +P +L L
Sbjct: 208 VKQMVDEALRHVPNEDGNKNIDQVNQIRDSLAIMGDNSTAFSLPQPHLMRTKLCDLKD-- 265
Query: 299 IEKLRPEFQAGLDELTRFILERTRPKQVAGTVMTGPVLAGVTQSFLDAINNGAVPTISSS 358
E L + A D+L + + RPK V G + G + LDA+N G +P+
Sbjct: 266 -EDLDSTYVARRDQLKKLVASIIRPKIVQGKTLNGKEFISFLEQILDALNKGEIPSTG-- 322
Query: 359 WQSVEEAECRRAYDSAAEVYLSAFDRTK-QAEEDALRDAHEAALRKALEAYGTVAVGTGT 417
S+ E + + ++Y R + E++L+ AHE A +A++A+ G
Sbjct: 323 --SLVEVFNKDIVERCVKLYNEKMVRVRLPMSEESLQSAHEMAHNEAIKAFDAQHFG--- 377
Query: 418 SRMHYEKVLSNFCRKTFQEYKRNAFLEADKQCSNMIQIMERKLR------AACSAPGVKV 471
R H +K + + QE +N L + Q S + + + A P +
Sbjct: 378 -RQHAKKSVDQL-DEQMQEVYKNFVLANEYQSSKLCEALYTSCEDDMDHLQALRLPSMAK 435
Query: 472 SNVIQVLESLLTEYETSCSGPSK 494
N V + +E C GPSK
Sbjct: 436 FNAGFVYCN--KTFEQQCVGPSK 456
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.129 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 19,117,102
Number of extensions: 741726
Number of successful extensions: 4218
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 4242
Number of HSP's successfully gapped: 14
Length of query: 1082
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 973
Effective length of database: 8,118,225
Effective search space: 7899032925
Effective search space used: 7899032925
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 117 (49.7 bits)