BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0297200 Os02g0297200|AK107164
         (763 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G45470.1  | chr5:18422164-18424764 REVERSE LENGTH=867           58   2e-08
AT5G45530.1  | chr5:18454316-18457222 REVERSE LENGTH=799           56   6e-08

>AT5G45470.1 | chr5:18422164-18424764 REVERSE LENGTH=867
          Length = 866

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 18/196 (9%)

Query: 567 HAILIWHIATCLCDMQMPAAITHKKTRPXXXXXXXXXXXXXXXXXXTSLSRYCAYLVSSA 626
            ++L+WHIAT LC  Q       K+T P                    +S Y  YL+   
Sbjct: 662 QSLLMWHIATELCYQQH-----EKETIPEGYDEQRKHYSNREFSKI--ISDYMMYLLILQ 714

Query: 627 PELLPEHQYTTRTIAEAVLLELRVCL--RGCASDKEV-------LDRLKAVAETATASSP 677
           P L+ E     +      L E       R   +D+ V       LD    +         
Sbjct: 715 PGLMSEVAGIGKIRFRDTLAETHKFFQRRHIENDRSVETATLNILDVESEIEPMGVKGDR 774

Query: 678 ESGIHVHGARLWTQL--MVIPDQEMTWKLLARVWAELMLFVTPADNATAHVQHLTMGGEH 735
              +    +RL   L  M     +  W++L++VW EL+ +     ++TAHV+ L+ GGE 
Sbjct: 775 SKSVLFDASRLAKDLAEMEKTHNKDKWEILSKVWVELLCYAACHCDSTAHVEQLSRGGEL 834

Query: 736 ITHLWALLTHAGIVDR 751
           I  +W L+ H G+ D+
Sbjct: 835 INFVWLLMAHFGLTDQ 850



>AT5G45530.1 | chr5:18454316-18457222 REVERSE LENGTH=799
          Length = 798

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 77/198 (38%), Gaps = 24/198 (12%)

Query: 567 HAILIWHIATCLCDMQMPAAITHKKTRPXXXXXXXXXXXXXXXXXXTSLSRYCAYLVSSA 626
            ++L+WHIAT LC  +       K +R                     +S Y  YL+   
Sbjct: 595 QSLLLWHIATELCFQKEEGGKMEKLSREGYDDREFSKI----------ISDYMMYLLIMR 644

Query: 627 PELLPEHQYTTRTIAEAVLLELRVCLRGCASDKEVLDRLKAVAETATASSPESGIHVHG- 685
           P+L+ E              E     +G    K++ D  +A       S+    I V G 
Sbjct: 645 PKLMSEVAGIGTIRFRDTKAEAERFFKG-RQIKDLRDMKRASETVLLVSNDIEPILVKGD 703

Query: 686 ------------ARLWTQLMVIPDQEMTWKLLARVWAELMLFVTPADNATAHVQHLTMGG 733
                       A+    L    +++  W++L++VW EL+ +      AT HV  L+ GG
Sbjct: 704 RSKSVLFDASMLAKELQNLKESSNEDGKWRVLSKVWVELLCYAASHCKATEHVAQLSRGG 763

Query: 734 EHITHLWALLTHAGIVDR 751
           E +  +W L+ H G+ D+
Sbjct: 764 ELLNFVWLLMAHFGLGDQ 781



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.326    0.137    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,452,447
Number of extensions: 461683
Number of successful extensions: 1360
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1360
Number of HSP's successfully gapped: 3
Length of query: 763
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 657
Effective length of database: 8,200,473
Effective search space: 5387710761
Effective search space used: 5387710761
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 116 (49.3 bits)