BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0258300 Os02g0258300|AK073995
(842 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46380.1 | chr2:19039377-19042171 FORWARD LENGTH=769 304 1e-82
AT3G61670.1 | chr3:22819052-22821870 FORWARD LENGTH=791 291 1e-78
AT4G01090.1 | chr4:470834-473248 REVERSE LENGTH=715 223 4e-58
AT1G01440.1 | chr1:159935-162219 REVERSE LENGTH=665 198 1e-50
AT2G23460.1 | chr2:9995699-9998945 FORWARD LENGTH=889 61 3e-09
AT3G56410.2 | chr3:20916320-20921134 REVERSE LENGTH=1536 59 1e-08
AT4G34390.1 | chr4:16441579-16444840 FORWARD LENGTH=862 56 8e-08
AT1G31930.1 | chr1:11465832-11468961 FORWARD LENGTH=849 49 8e-06
>AT2G46380.1 | chr2:19039377-19042171 FORWARD LENGTH=769
Length = 768
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 229/676 (33%), Positives = 328/676 (48%), Gaps = 97/676 (14%)
Query: 210 EGLNRVNGLEKDRADLLRMLDELRDQVQRSCEITNKPSGSTSTDKA---VDASGLYNPRE 266
+ L+ +E+DRA L+R LD+L++Q+ + E PS S+ KA V +SG
Sbjct: 141 DSLSTDEAIEQDRAGLVRKLDKLKEQLVQPKE-QQIPSSSSGFQKAPLRVFSSGR----- 194
Query: 267 RLSRLRHGSPQLQRSGSQQSPSLNGQAPCIPQAYAPGTAQQDLH------GYGEPMAHMG 320
R P + S+ P PC+ + + +H YG+P G
Sbjct: 195 -----RIAGPSYYQYYSEPEP------PCLYNNNSDVSLHGPMHNPANVPAYGDPH---G 240
Query: 321 APSYPVGTYPWRNFDNYFY-GQYDPDPLISYHHDGFYHQPACSCLHCY---HREFLPVQG 376
P + P ++ Y G D ++ H+G +HQ CSC HCY HR V
Sbjct: 241 FPMHERTLQPSHLHNSRQYIGNNGHDVFDTHPHNGMFHQSTCSCTHCYDPYHRASGSV-F 299
Query: 377 PPLGFNHRRVPPYVMNNPRVYPVDGPAMFGTQNYNSRVNA-------------------- 416
PP G P + NP YP + FGT ++ R
Sbjct: 300 PPSGL------PDALRNPGFYPHERSFGFGTSLHSPRTFIPPGSQSPGPQLRGRCTSGFK 353
Query: 417 SMQRNHMRAAMSKKPAQT------CEPIACGAPFTICYNCYEVLQLPKKSPVPGKDEYKL 470
M+ N + KP + +P+A GAPF C NC+++L+LP+K + + ++
Sbjct: 354 DMRMNAVSRVHPSKPVSSSGGSRLIQPVAGGAPFINCINCFKLLKLPEKIDSATRKKQRM 413
Query: 471 RCGSCSHALVVKLDGSRLDVXXXXXXXXXXXXXXXXXNDGQGSNANSAPHERVLPLYSFS 530
RCG+CS + +L + + + AN + + Y F
Sbjct: 414 RCGACSCVIDYSFVDKKLILSTDPASARKPETHSRLRWE---TTANFSSDDYDNAAYEFH 470
Query: 531 AASHGSQDLPSN----SSEAEKMQGXXXXXXXXEDENSPARSNSQRDTPGSRDLHPEAEV 586
A GS D+ + S+ A++MQ ++ + S++ R + LH + E
Sbjct: 471 AMDRGSADVSTALVLISNTAQEMQITDATSPSVSEDELSSDSSTVRKVNLASPLHKQFEY 530
Query: 587 STRVPSLHLRDHFGYSPSEKVVDGSGKGSRSTRSEHEKAVLTES-FKQNTVKDVSVVNIM 645
S S+++RD SG S+S+RSE ++ L+++ +QN++K+ SV M
Sbjct: 531 S----SINVRDR------------SGPRSQSSRSEQDRVTLSKTAMRQNSMKEASVAIEM 574
Query: 646 XXXXXXXXXXXXXXXRGDVAQPVDHPRAVKTGDSFFTNLIKKSFK-INNGMGN-GRAKVF 703
D D R K G F +++K SFK + + N GR+ V
Sbjct: 575 DVNDYSHNNEVSQDSANDCTD--DQGRTKKGG---FASIMKNSFKDLKKSIQNEGRSDVS 629
Query: 704 INGYPISDRAVRKAEKIAGPIYPGEYWYDYRAGFWGVMGQSCLGMIPPYIPELNYPMPKK 763
ING+P+++R V+ AEK AGPI PG YWYDYRAGFWGV+G CLG++PP+I ELNYPMP+
Sbjct: 630 INGHPVAERLVKMAEKQAGPIRPGNYWYDYRAGFWGVLGSHCLGILPPFIEELNYPMPEN 689
Query: 764 CAAGNTGVFVNGRELHQKDLDLLVGRGLPDSPGRSYRVEMSGKVSDEVSGEELYCLGKLA 823
CA G T VFVNGRELHQKDL LL RGLP RSY V +SG+V DE +GEEL LGKLA
Sbjct: 690 CAGGTTRVFVNGRELHQKDLRLLTARGLPRDRDRSYTVYISGRVIDEDTGEELDSLGKLA 749
Query: 824 PTVEKMKRGFGMRVPR 839
PTV+K+KRGFGMRVPR
Sbjct: 750 PTVDKLKRGFGMRVPR 765
>AT3G61670.1 | chr3:22819052-22821870 FORWARD LENGTH=791
Length = 790
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 228/655 (34%), Positives = 322/655 (49%), Gaps = 89/655 (13%)
Query: 217 GLEKDRADLLRMLDELRDQVQRSCEITNKPSGSTSTDKAVDASGLYN--PRERLSRLRHG 274
+E+DRA LLR L+++++Q+ +SC + S + + ASGL P S H
Sbjct: 190 AIEQDRAGLLRQLEKIKEQLVQSCNVATDKSKEQAPSSS-SASGLNKAPPMRFHSTGNHA 248
Query: 275 SPQLQRSGSQQSPSLNGQAPCIPQAYAPGTAQQDLH-GYGEPMAHMGAPSYPVGTYPWRN 333
Q P N P ++ +H YG+P P + G +P
Sbjct: 249 VGGPSYYHQPQFPYNNNNINEAPMHHSL------MHPSYGDPHRF---PIHGRGPHP--- 296
Query: 334 FDNYFYGQY------DPDPLISY-HHDGFYHQPACSCLHCYHREFLPVQGPPL------- 379
YF GQY D +Y +G +H +CSC HCY ++ P +
Sbjct: 297 ---YFSGQYVGNNNNGHDLFDAYPQQNGHFHHSSCSCYHCYDNKYWRGSAPVVPDAPYNA 353
Query: 380 GFN-HRRV----PPYVMNNPRVYPVDGPAMFGT--QNYNSRVNASMQRNHMRAAMSKKPA 432
GF H V PP+ NPR Y G G N++ ++ R + +
Sbjct: 354 GFYPHESVMGFAPPH---NPRTYGSRGLQPHGRWPSNFSDAQMDALSRIRPPKVVLSGGS 410
Query: 433 QTCEPIACGAPFTICYNCYEVLQLPKKSPVPGKDEYKLRCGSCSHALVVKLDGSRLDVXX 492
+ P+A GAPF C NC+E+LQLPKK K + K+RCG+CS + + + ++ +
Sbjct: 411 RHIRPLAGGAPFITCQNCFELLQLPKKPEAGTKKQQKVRCGACSCLIDLSVVNNKFVLST 470
Query: 493 XXXXXXXXXXXXXXXNDGQGSNANSAPHERVLPLYSFSAASHGSQDLPS-NSSEAEKMQG 551
A+ + L Y F + +DLP S +++ MQ
Sbjct: 471 NTASTRQGEARVA---------ADYTSDDYDLLGYVFHSLDDEPRDLPGLISDKSQDMQH 521
Query: 552 XXXXXXXXEDENSPARSNSQRDTPGSRDLHPEAEVSTRVPSLHLRDHFGYSPSEKVVDGS 611
+ + S + + P AE +H D S
Sbjct: 522 VHSHSASLSEGELSSDSLTAK---------PLAEAHENFVDYSSINH----------DRS 562
Query: 612 GKGSRSTRSEHEKAVLTES--FKQNTVKDVSVVNIMXXXXXXXXXXXXXXXRGDVAQPVD 669
G GSRS+RSEH+K L+++ +QN++K+VS+ + M R
Sbjct: 563 GAGSRSSRSEHDKVTLSKATAMRQNSMKEVSLASEMEVNFNDYSH------RNSGVSKDQ 616
Query: 670 HPRAVKTGDSFFTNLIKKSFK-----INNGMGNGRAKVFINGYPISDRAVRKAEKIAGPI 724
RA K+G F +++KKSFK I N GN ++ V ING+P+++R +RKAEK AG I
Sbjct: 617 QQRAKKSG---FASIVKKSFKDLTKSIQNDEGN-KSNVSINGHPLTERLLRKAEKQAGVI 672
Query: 725 YPGEYWYDYRAGFWGVMGQSCLGMIPPYIPELNYPMPKKCAAGNTGVFVNGRELHQKDLD 784
PG YWYDYRAGFWGVMG LG++PP+I ELNYPMP+ C+ G TGVFVNGRELH+KDLD
Sbjct: 673 QPGNYWYDYRAGFWGVMGGPGLGILPPFIEELNYPMPENCSGGTTGVFVNGRELHRKDLD 732
Query: 785 LLVGRGLPDSPGRSYRVEMSGKVSDEVSGEELYCLGKLAPTVEKMKRGFGMRVPR 839
LL GRGLP RSY V+++G+V DE +GEEL CLGKLAPT+EK+KRGFGMR+P+
Sbjct: 733 LLAGRGLPPDRDRSYIVDITGRVIDEDTGEELDCLGKLAPTIEKLKRGFGMRLPK 787
>AT4G01090.1 | chr4:470834-473248 REVERSE LENGTH=715
Length = 714
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 150/454 (33%), Positives = 223/454 (49%), Gaps = 48/454 (10%)
Query: 410 YNSRVNASMQRNHMRAAMSKKPAQTCEPIACGAPFTICYNCYEVLQLPKKSPVPGKDEYK 469
++S + + R +++ A+S + C P+A GAPF C++C+E+L LPKK + + +K
Sbjct: 285 HDSEMGGAFARGYVKKAVSDTGVRRCHPLAGGAPFIACHSCFELLYLPKKKLLSQERLHK 344
Query: 470 LRCGSCSHALVVKLDGSRLDVXXXXXXXXXXXXXXXXXNDGQGSNANSAPHERVLPLYSF 529
L+CG+CS + + +L N N+ E + F
Sbjct: 345 LQCGACSEVISFTIVDRKLVFSSGNEETKPVSLEVEDRN-----TTNTVVIEEEVSSVDF 399
Query: 530 SAASHGSQDLPSNSSEAEKMQGXXXXXXXXEDENSPARSNSQRDTPGSRDLHPEAEVSTR 589
+++ +D+P E E +Q ++ RS SQ R + +
Sbjct: 400 NSS---GRDIP-RKDEEEPVQELRNHQDTITTQS--VRSESQHSDDEERSSNSSEQQQKE 453
Query: 590 VPSLHLRDHFGYSPSEKVVDGSGKGSRSTR-SEHEKAVLTESFKQNTVKDVSVVNIMXXX 648
V S+ R GKGS++ + + A L E F+ + V ++ M
Sbjct: 454 VKSVRRR---------------GKGSKAPEPAAPDNASLLELFEYSNVNRAALAYGMAQL 498
Query: 649 XXXXXXXXXXXXRGDVAQPVDHPRAVKTGDSFFTNL-IKKSFKINNGMGNGRAKVFI--- 704
D +P + + ++N I + + +N G+ I
Sbjct: 499 GYEKPDKQKSFMTQDSLKPESVATETEVSYNGYSNTEISEDSRYSNRKGSEYGSTEITTR 558
Query: 705 -----------------NGYPISDRAVRKAEKIAGPIYPGEYWYDYRAGFWGVMGQSCLG 747
NG+ I + V AEK+AGPI G+YWYDYRAGFWGVMG+ CLG
Sbjct: 559 SSTDQNEDQMKSLEVWVNGHLIPEDLVSSAEKLAGPIQAGKYWYDYRAGFWGVMGKPCLG 618
Query: 748 MIPPYIPELNYPMPKKCAAGNTGVFVNGRELHQKDLDLLVGRGLPDSPGRSYRVEMSGKV 807
+IPP+I E ++PM CAAGNT VFVNGRELH++D +LLVGRGLP RSY V++SG++
Sbjct: 619 IIPPFIEEFSHPMLDNCAAGNTDVFVNGRELHKRDFELLVGRGLPRDKNRSYIVDISGRI 678
Query: 808 SDEVSGEELYCLGKLAPTVEKMKRGFGMRVPRII 841
D+ SGEEL+ LGKLAPT+EK+K GFGMRVPR +
Sbjct: 679 LDQDSGEELHSLGKLAPTIEKVKHGFGMRVPRSL 712
>AT1G01440.1 | chr1:159935-162219 REVERSE LENGTH=665
Length = 664
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 90/150 (60%), Positives = 113/150 (75%)
Query: 692 NNGMGNGRAKVFINGYPISDRAVRKAEKIAGPIYPGEYWYDYRAGFWGVMGQSCLGMIPP 751
+N N + +V++NGY I + V AEK AGP+ G+YWYDYRAGFWGVMG CLG+IPP
Sbjct: 513 SNDQNNEQLEVWVNGYLIPEDLVISAEKQAGPVQAGKYWYDYRAGFWGVMGNPCLGIIPP 572
Query: 752 YIPELNYPMPKKCAAGNTGVFVNGRELHQKDLDLLVGRGLPDSPGRSYRVEMSGKVSDEV 811
+I E + PMP C AGNT VFVNGRELH++DL+LL RGLP RSY ++++G+V D
Sbjct: 573 FIEEFSRPMPDNCGAGNTSVFVNGRELHERDLELLSSRGLPRGKNRSYIIDIAGRVLDGD 632
Query: 812 SGEELYCLGKLAPTVEKMKRGFGMRVPRII 841
SGEEL LG+LAPTV+K+K GFGMRVPR +
Sbjct: 633 SGEELKSLGRLAPTVDKVKHGFGMRVPRSL 662
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 49/78 (62%)
Query: 411 NSRVNASMQRNHMRAAMSKKPAQTCEPIACGAPFTICYNCYEVLQLPKKSPVPGKDEYKL 470
+S + + R +++ A+S ++ C P+A GAPF C++C+E+L +PKK + + + K+
Sbjct: 247 DSEMGGAFARGYVQQAVSDTDSRRCHPLAGGAPFIACHSCFELLYVPKKKLLGQERQQKM 306
Query: 471 RCGSCSHALVVKLDGSRL 488
+CG+CS + ++ +L
Sbjct: 307 QCGACSEVITFRVVDKKL 324
>AT2G23460.1 | chr2:9995699-9998945 FORWARD LENGTH=889
Length = 888
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 702 VFINGYPISDRAVRKAEKIAGP---IYPGEYWYDYRAGFWGVMGQSCLGMIPPYIPELNY 758
V++NG P+ + + + P + PG+YWYD +G WG G+ +I P++ +
Sbjct: 317 VYVNGQPLYPEELVTLQTCSNPPKKLKPGDYWYDKVSGLWGKEGEKPYQIISPHL-NVGG 375
Query: 759 PMPKKCAAGNTGVFVNGRELHQKDLDLLVGRGLPDSPGRSYRVEMSGKVSDE 810
P+ + + GNT VF+NGRE+ + +L +L G+ + + V G +E
Sbjct: 376 PISPEASNGNTQVFINGREITKVELRMLQLAGVQCAGNPHFWVNEDGSYQEE 427
>AT3G56410.2 | chr3:20916320-20921134 REVERSE LENGTH=1536
Length = 1535
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 20/141 (14%)
Query: 355 FYHQPACSCLH--CYHREFLPVQGPPLGFNHRRVPPYVMNNPRVY-PVDGPA-------M 404
+YH+ + S LH YH + P + P + + + R Y P P
Sbjct: 289 YYHRSSQSQLHDLQYHNLYEPSRS--------ETPHHSVYSERSYVPAAAPHRSTYSEHS 340
Query: 405 FGTQNYNSRVNASMQRNHMRAAMSKKPA--QTCEPIACGAPFTICYNCYEVLQLPKKSPV 462
G ++ S+ RN R + P + P A GAPF C C E+LQLP+ SP
Sbjct: 341 VGISKSDTSSEKSILRNKKRYVRERNPVVKRHILPSAGGAPFATCSYCLELLQLPQVSPQ 400
Query: 463 PGKDEYKLRCGSCSHALVVKL 483
+ Y++RCGSCS L +
Sbjct: 401 GKRQRYQVRCGSCSGVLKFSI 421
>AT4G34390.1 | chr4:16441579-16444840 FORWARD LENGTH=862
Length = 861
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 702 VFINGYPISDRAVRKAEKIAGP---IYPGEYWYDYRAGFWGVMGQSCLGMIPPYIPELNY 758
+ +N P+S+ + + P + PG YWYD AG+WG +G+ +I P Y
Sbjct: 306 IIVNDKPLSEDELYTLQTCPNPPKKLKPGHYWYDKVAGYWGKIGEKPSQIISPNNSIGGY 365
Query: 759 PMPKKCAAGNTGVFVNGRELHQKDLDLLVGRGL 791
+ +K + G+T +++NGRE+ + +L +L G+
Sbjct: 366 -ISEKVSNGDTEIYINGREITKPELTMLKWAGV 397
>AT1G31930.1 | chr1:11465832-11468961 FORWARD LENGTH=849
Length = 848
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 701 KVFINGYPISDRAVRKAEKIAGP---IYPGEYWYDYRAGFWGVMGQSCLGMIPPYIPELN 757
++ +NGYP+ + P + PG YWYD +G WG G+ +I LN
Sbjct: 266 QLIVNGYPLKPEEMADLLNCLLPPQKLKPGRYWYDKESGLWGKEGEKPDRVIS---SNLN 322
Query: 758 YP--MPKKCAAGNTGVFVNGRELHQKDLDLL 786
+ + + GNT V++NGRE+ + +L +L
Sbjct: 323 FTGKLSPDASNGNTEVYINGREITKLELRIL 353
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.134 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,426,282
Number of extensions: 809638
Number of successful extensions: 1930
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1920
Number of HSP's successfully gapped: 11
Length of query: 842
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 735
Effective length of database: 8,173,057
Effective search space: 6007196895
Effective search space used: 6007196895
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 116 (49.3 bits)