BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0247100 Os02g0247100|Os02g0247100
(269 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G58120.1 | chr3:21521289-21523078 REVERSE LENGTH=330 184 5e-47
AT2G42380.2 | chr2:17647205-17648660 REVERSE LENGTH=322 179 1e-45
AT1G43700.1 | chr1:16484352-16486017 FORWARD LENGTH=342 94 9e-20
AT1G06070.1 | chr1:1835201-1837116 REVERSE LENGTH=424 89 2e-18
AT1G58110.1 | chr1:21515919-21517374 REVERSE LENGTH=375 89 3e-18
AT2G31370.3 | chr2:13379448-13381072 FORWARD LENGTH=399 86 1e-17
AT2G40620.1 | chr2:16954804-16956872 REVERSE LENGTH=368 86 1e-17
AT1G06850.1 | chr1:2105233-2106518 FORWARD LENGTH=338 86 2e-17
AT4G38900.1 | chr4:18139564-18141520 REVERSE LENGTH=554 80 9e-16
AT5G04840.1 | chr5:1406005-1407648 FORWARD LENGTH=308 80 9e-16
AT2G21230.3 | chr2:9093920-9096059 REVERSE LENGTH=526 75 3e-14
AT1G35490.1 | chr1:13061856-13063166 FORWARD LENGTH=301 66 2e-11
AT5G07160.1 | chr5:2219971-2220709 REVERSE LENGTH=151 64 9e-11
AT2G13150.1 | chr2:5437056-5438459 FORWARD LENGTH=263 59 3e-09
AT2G12900.1 | chr2:5293897-5295480 FORWARD LENGTH=265 57 1e-08
AT4G06598.1 | chr4:3663945-3665395 FORWARD LENGTH=342 56 2e-08
AT2G12940.1 | chr2:5317513-5319089 FORWARD LENGTH=295 53 2e-07
AT5G11260.1 | chr5:3593583-3594800 REVERSE LENGTH=169 48 5e-06
>AT3G58120.1 | chr3:21521289-21523078 REVERSE LENGTH=330
Length = 329
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/102 (89%), Positives = 95/102 (93%)
Query: 140 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVG 199
DPKRVKRILANRQSAQRSRVRKLQYISELERSVT+LQ EVS LSPRVAFLDHQR LL V
Sbjct: 202 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSVLSPRVAFLDHQRLLLNVD 261
Query: 200 NSHLKQRIAALAQDKIFKDAHQEALKKEIERLRQVYHQQQIK 241
NS +KQRIAALAQDKIFKDAHQEALK+EIERLRQVYHQQ +K
Sbjct: 262 NSAIKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQSLK 303
>AT2G42380.2 | chr2:17647205-17648660 REVERSE LENGTH=322
Length = 321
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/113 (79%), Positives = 98/113 (86%)
Query: 140 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVG 199
DPKRVKRILANRQSAQRSRVRKLQYISELERSVT+LQ EVS LSPRVAFLDHQR LL V
Sbjct: 186 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVD 245
Query: 200 NSHLKQRIAALAQDKIFKDAHQEALKKEIERLRQVYHQQQIKATGGADIATAA 252
NS LKQRIAAL+QDK+FKDAHQEALK+EIERLRQVY+QQ + A+ +A
Sbjct: 246 NSALKQRIAALSQDKLFKDAHQEALKREIERLRQVYNQQSLTNVENANHLSAT 298
>AT1G43700.1 | chr1:16484352-16486017 FORWARD LENGTH=342
Length = 341
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 61/95 (64%)
Query: 140 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVG 199
DPKR KRILANRQSA RS+ RK++Y ELER V TLQ E + LS +V L S L
Sbjct: 194 DPKRAKRILANRQSAARSKERKIRYTGELERKVQTLQNEATTLSAQVTMLQRGTSELNTE 253
Query: 200 NSHLKQRIAALAQDKIFKDAHQEALKKEIERLRQV 234
N HLK R+ AL Q +DA EAL+ E+ RL+ V
Sbjct: 254 NKHLKMRLQALEQQAELRDALNEALRDELNRLKVV 288
>AT1G06070.1 | chr1:1835201-1837116 REVERSE LENGTH=424
Length = 423
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 140 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVG 199
DPKR KRI ANRQSA RS+ RK++YI+ELER V TLQ E ++LS ++ L + L V
Sbjct: 210 DPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLGVE 269
Query: 200 NSHLKQRIAALAQDKIFKDAHQEALKKEIERLRQVYHQQQIKATG------GADIATAAS 253
N+ LK R+ + Q +DA +ALK+E++ L+ + Q T G++ +
Sbjct: 270 NNELKLRVQTMEQQVHLQDALNDALKEEVQHLKVLTGQGPSNGTSMNYGSFGSNQQFYPN 329
Query: 254 MQAKHELLAC 263
Q+ H +LA
Sbjct: 330 NQSMHTILAA 339
>AT1G58110.1 | chr1:21515919-21517374 REVERSE LENGTH=375
Length = 374
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 64/87 (73%)
Query: 149 ANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVGNSHLKQRIA 208
A +Q AQRSRVRKLQYISELER+V TLQ E S +S + FL+ + +L++ N LK+R+
Sbjct: 238 AKQQFAQRSRVRKLQYISELERNVQTLQAEGSKVSAELDFLNQRNLILSMENKALKKRLE 297
Query: 209 ALAQDKIFKDAHQEALKKEIERLRQVY 235
++AQ+K+ K QE L+KEI RLR +Y
Sbjct: 298 SIAQEKLIKQLEQEVLEKEIGRLRALY 324
>AT2G31370.3 | chr2:13379448-13381072 FORWARD LENGTH=399
Length = 398
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%)
Query: 140 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVG 199
DPKR KRI ANRQSA RS+ RK +YI ELER V TLQ E + LS ++ L + LTV
Sbjct: 201 DPKRAKRIWANRQSAARSKERKTRYIFELERKVQTLQTEATTLSAQLTLLQRDTNGLTVE 260
Query: 200 NSHLKQRIAALAQDKIFKDAHQEALKKEIERLRQVYHQ 237
N+ LK R+ + Q +D EALK+EI+ L+ + Q
Sbjct: 261 NNELKLRLQTMEQQVHLQDELNEALKEEIQHLKVLTGQ 298
>AT2G40620.1 | chr2:16954804-16956872 REVERSE LENGTH=368
Length = 367
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 61/93 (65%)
Query: 140 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVG 199
DPKR KRI+ANRQSA RS+ RK +YI ELER V TLQ E + LS +++ + L+
Sbjct: 148 DPKRAKRIIANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLSLFQRDTTGLSSE 207
Query: 200 NSHLKQRIAALAQDKIFKDAHQEALKKEIERLR 232
N+ LK R+ + Q +DA E LKKE+ERL+
Sbjct: 208 NTELKLRLQVMEQQAKLRDALNEQLKKEVERLK 240
>AT1G06850.1 | chr1:2105233-2106518 FORWARD LENGTH=338
Length = 337
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 61/93 (65%)
Query: 140 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVG 199
DPKR KRILANRQSA RS+ RK +YI ELER V +LQ E + LS ++ + L
Sbjct: 148 DPKRAKRILANRQSAARSKERKARYIQELERKVQSLQTEATTLSAQLTLYQRDTNGLANE 207
Query: 200 NSHLKQRIAALAQDKIFKDAHQEALKKEIERLR 232
N+ LK R+ A+ Q ++A EAL+KE+ER++
Sbjct: 208 NTELKLRLQAMEQQAQLRNALNEALRKEVERMK 240
>AT4G38900.1 | chr4:18139564-18141520 REVERSE LENGTH=554
Length = 553
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 140 DPKRVKR------ILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQR 193
DPKRVKR ILANRQSA RS+ RK++YI ELE V TLQ E + LS ++ L
Sbjct: 394 DPKRVKRNDPLFRILANRQSAARSKERKMRYIVELEHKVQTLQTEATTLSAQLTLLQRDM 453
Query: 194 SLLTVGNSHLKQRIAALAQDKIFKDAHQEALKKEIERLR 232
LT N+ LK R+ A+ Q +DA EAL E++RL+
Sbjct: 454 MGLTNQNNELKFRLQAMEQQARLRDALNEALNGEVQRLK 492
>AT5G04840.1 | chr5:1406005-1407648 FORWARD LENGTH=308
Length = 307
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 58/84 (69%)
Query: 149 ANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVGNSHLKQRIA 208
A R QRSRVRKLQYI+ELER+V LQ + LS RVA L R+ L++ NS LKQ++A
Sbjct: 177 AKRNPGQRSRVRKLQYIAELERTVGMLQTVEADLSVRVASLLQTRATLSLENSQLKQQMA 236
Query: 209 ALAQDKIFKDAHQEALKKEIERLR 232
L QDK+ ++ + LKKE +RL+
Sbjct: 237 ILKQDKLIREGEYQLLKKEAQRLK 260
>AT2G21230.3 | chr2:9093920-9096059 REVERSE LENGTH=526
Length = 525
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 140 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVG 199
DPKRVKRILANR SA RS+ RK +Y++ELE V TLQ E + LS ++ L LT
Sbjct: 370 DPKRVKRILANRVSAARSKERKTRYMAELEHKVQTLQTEATTLSAQLTHLQRDSMGLTNQ 429
Query: 200 NSHLKQRIAALAQDKIFKDAHQ------EALKKEIERLRQV 234
NS LK R+ A+ Q +D E L +E++RL+ V
Sbjct: 430 NSELKFRLQAMEQQAQLRDGMHIIKTLSEKLNEEVQRLKLV 470
>AT1G35490.1 | chr1:13061856-13063166 FORWARD LENGTH=301
Length = 300
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 61/93 (65%), Gaps = 5/93 (5%)
Query: 140 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVG 199
D KR+K Q+A R+R+R+L+YIS+LER++ LQ+E +S + +LD Q +L++
Sbjct: 171 DSKRIKH-----QNAHRARLRRLEYISDLERTIQVLQVEGCEMSSAIHYLDQQLLMLSME 225
Query: 200 NSHLKQRIAALAQDKIFKDAHQEALKKEIERLR 232
N LKQR+ +LA+ + K Q+ L++EI L+
Sbjct: 226 NRALKQRMDSLAEIQKLKHVEQQLLEREIGNLQ 258
>AT5G07160.1 | chr5:2219971-2220709 REVERSE LENGTH=151
Length = 150
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%)
Query: 140 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVG 199
DPK +KRI++NR +AQ+SR +K+QY+ L + LQ EVS L ++A Q+ L
Sbjct: 48 DPKILKRIISNRVAAQKSRWKKVQYLDALVKRSMELQREVSELRSQLAITSEQKRYLENE 107
Query: 200 NSHLKQRIAALAQDKIFKDAHQEALKKEIERLR 232
LK+ I+A Q I D E K EIERL+
Sbjct: 108 QRQLKECISARVQHCINSDGVIEEYKTEIERLK 140
>AT2G13150.1 | chr2:5437056-5438459 FORWARD LENGTH=263
Length = 262
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%)
Query: 140 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVG 199
DPK V+RIL N++SA RS+ +KLQY+ LE + L+ + +++ ++ L++ +++
Sbjct: 149 DPKEVRRILKNQESAARSKQKKLQYMINLELKINFLENKNASIFEKIKLLENDKTMRMNE 208
Query: 200 NSHLKQRIAALAQDKIFKDAHQEALKKEIERLRQV 234
+ RI +L Q +DA E L EIERL+ V
Sbjct: 209 KKEIMIRIESLEQHAELRDALTEHLHVEIERLKAV 243
>AT2G12900.1 | chr2:5293897-5295480 FORWARD LENGTH=265
Length = 264
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%)
Query: 140 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVG 199
DPK+V+RIL NR+ A S+ RKL+Y+ +LE + L+ + + + ++ L+ +++L
Sbjct: 116 DPKKVRRILKNRELAASSKQRKLKYMIDLEHRIKFLENKNALIFEKIKLLEKDKTILMNE 175
Query: 200 NSHLKQRIAALAQDKIFKDAHQEALKKEIERLRQV 234
+ +I +L Q +DA E L EIERL+ +
Sbjct: 176 KKEITIQIESLEQQAQLRDALTEKLHVEIERLKVI 210
>AT4G06598.1 | chr4:3663945-3665395 FORWARD LENGTH=342
Length = 341
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 23/87 (26%)
Query: 149 ANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVGNSHLKQRIA 208
A +Q AQRSRVRK+QYI+ELER+V L+ N LK R+
Sbjct: 237 ARQQFAQRSRVRKIQYIAELERNVQILE-----------------------NKSLKNRLE 273
Query: 209 ALAQDKIFKDAHQEALKKEIERLRQVY 235
+LAQ+++ K + L+KEI RLR +Y
Sbjct: 274 SLAQEQLIKYLEHDVLEKEIVRLRALY 300
>AT2G12940.1 | chr2:5317513-5319089 FORWARD LENGTH=295
Length = 294
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 140 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLLTVG 199
DPK V+RIL NR+SA + +KLQY+ LE + ++ E +++ ++ L++ ++++
Sbjct: 148 DPKEVRRILKNRESAAHLKQKKLQYMINLEHRINFVENENASIFEKIKLLENDKTMMMNE 207
Query: 200 NSHLKQRIAALAQDKIFKDAHQEALKKEIERLRQ--VYHQQQIKATGGADIATAASMQAK 257
+ RI ++ +D E L E ERL+ + ++ +AT +Q +
Sbjct: 208 KKEIMIRIESMEIQAQLRDVLTEHLHGESERLKAALISNENGNGKVQKLRMATCEVLQNR 267
Query: 258 HEL 260
HE
Sbjct: 268 HEF 270
>AT5G11260.1 | chr5:3593583-3594800 REVERSE LENGTH=169
Length = 168
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 140 DPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSLL--- 196
+ KR+KR+L NR SAQ++R RK Y+SELE V L+ + S L R++ L ++ +L
Sbjct: 88 ENKRLKRLLRNRVSAQQARERKKAYLSELENRVKDLENKNSELEERLSTLQNENQMLRHI 147
Query: 197 ---TVGN 200
T GN
Sbjct: 148 LKNTTGN 154
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.129 0.348
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,182,845
Number of extensions: 92449
Number of successful extensions: 466
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 461
Number of HSP's successfully gapped: 22
Length of query: 269
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 172
Effective length of database: 8,447,217
Effective search space: 1452921324
Effective search space used: 1452921324
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)