BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0236000 Os02g0236000|AK070560
(432 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G30970.1 | chr2:13179012-13181686 FORWARD LENGTH=431 719 0.0
AT5G11520.1 | chr5:3685257-3687721 REVERSE LENGTH=450 421 e-118
AT5G19550.1 | chr5:6598201-6601597 FORWARD LENGTH=406 415 e-116
AT1G62800.2 | chr1:23253934-23257416 REVERSE LENGTH=406 398 e-111
AT4G31990.3 | chr4:15470876-15473521 REVERSE LENGTH=463 388 e-108
>AT2G30970.1 | chr2:13179012-13181686 FORWARD LENGTH=431
Length = 430
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/399 (83%), Positives = 364/399 (91%)
Query: 33 SLFGHVEPASKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGN 92
S + VEPA KDPILGVTEAFLADPSP+KVNVGVGAYRDDNGKPVVLECVREAE+R+AG+
Sbjct: 31 SWWKSVEPAPKDPILGVTEAFLADPSPEKVNVGVGAYRDDNGKPVVLECVREAEKRLAGS 90
Query: 93 LNMEYLPMGGSIKMIEESLKLAYGEDSDFIKDKRIAAVQALSGTGACRLFADFQRRFLPN 152
MEYLPMGGS KM++ +LKLAYG++S+FIKDKRIAAVQ LSGTGACRLFADFQ+RF P
Sbjct: 91 TFMEYLPMGGSAKMVDLTLKLAYGDNSEFIKDKRIAAVQTLSGTGACRLFADFQKRFSPG 150
Query: 153 SQIYIPTPTWSNHHNIWRDAQVPQRTFTYYHPESRGLDFAGLMDDIKNAPNGSFFLLHAC 212
SQIYIP PTWSNHHNIW+DAQVPQ+T+ YYHPE++GLDF+ LMDD+KNAP GSFFLLHAC
Sbjct: 151 SQIYIPVPTWSNHHNIWKDAQVPQKTYHYYHPETKGLDFSALMDDVKNAPEGSFFLLHAC 210
Query: 213 AHNPTGVDPTEEQWREISYQFKIKNHFPFFDMAYQGFASGDPERDAKAIRIFLEDGHQIG 272
AHNPTGVDPTEEQWREIS FK K HF FFDMAYQGFASGDP RDAK+IRIFLEDGH IG
Sbjct: 211 AHNPTGVDPTEEQWREISQLFKAKKHFAFFDMAYQGFASGDPARDAKSIRIFLEDGHHIG 270
Query: 273 CAQSYAKNMGLYGQRAGCLSILCEDEMQAVSVKSQLQQIARPMYSNPPVHGALVVSIILN 332
+QSYAKNMGLYGQR GCLS+LCED QAV+VKSQLQQ+ARPMYSNPP+HGA +VS IL
Sbjct: 271 ISQSYAKNMGLYGQRVGCLSVLCEDPKQAVAVKSQLQQLARPMYSNPPLHGAQLVSTILE 330
Query: 333 DPELKSLWLKEVKGMADRIIGMRKALRENLEGLGSPLSWDHITNQIGMFCYSGMTPEQVD 392
DPELKSLWLKEVK MADRIIGMR LRE+LE LGSPLSW+H+T QIGMFCYSG+TPEQVD
Sbjct: 331 DPELKSLWLKEVKVMADRIIGMRTTLRESLEKLGSPLSWEHVTKQIGMFCYSGLTPEQVD 390
Query: 393 RLTNEYHIYMTRNGRISMAGVTTGNVAYLANAIHEVTKT 431
RLT+EYHIYMTRNGRISMAGVTTGNV YLANAIHEVTK+
Sbjct: 391 RLTSEYHIYMTRNGRISMAGVTTGNVGYLANAIHEVTKS 429
>AT5G11520.1 | chr5:3685257-3687721 REVERSE LENGTH=450
Length = 449
Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/398 (52%), Positives = 271/398 (68%), Gaps = 2/398 (0%)
Query: 33 SLFGHVEPASKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGN 92
S+F H+ A +DPILGVT A+ DPSP K+N+GVGAYR + GKP+VL VR+AE+++ +
Sbjct: 47 SVFSHLVQAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLIND 106
Query: 93 LN--MEYLPMGGSIKMIEESLKLAYGEDSDFIKDKRIAAVQALSGTGACRLFADFQRRFL 150
EYLP+ G ++ + S KL G DS I++ RI V+ LSGTG+ R+ +F +
Sbjct: 107 RTRIKEYLPIVGLVEFNKLSAKLILGADSPAIRENRITTVECLSGTGSLRVGGEFLAKHY 166
Query: 151 PNSQIYIPTPTWSNHHNIWRDAQVPQRTFTYYHPESRGLDFAGLMDDIKNAPNGSFFLLH 210
IYI PTW NH I+ A + +T+ YY P +RGL+F GL++D+ A GS LLH
Sbjct: 167 HQKTIYITQPTWGNHPKIFTLAGLTVKTYRYYDPATRGLNFQGLLEDLGAAAPGSIVLLH 226
Query: 211 ACAHNPTGVDPTEEQWREISYQFKIKNHFPFFDMAYQGFASGDPERDAKAIRIFLEDGHQ 270
ACAHNPTGVDPT +QW +I + K PFFD AYQGFASG + DAK IR+F+ DG +
Sbjct: 227 ACAHNPTGVDPTIQQWEQIRKLMRSKGLMPFFDSAYQGFASGSLDTDAKPIRMFVADGGE 286
Query: 271 IGCAQSYAKNMGLYGQRAGCLSILCEDEMQAVSVKSQLQQIARPMYSNPPVHGALVVSII 330
AQSYAKNMGLYG+R G LSI+C+ A V+SQL+ + RPMYS+PP+HGA +V++I
Sbjct: 287 CLVAQSYAKNMGLYGERVGALSIVCKSADVAGRVESQLKLVIRPMYSSPPIHGASIVAVI 346
Query: 331 LNDPELKSLWLKEVKGMADRIIGMRKALRENLEGLGSPLSWDHITNQIGMFCYSGMTPEQ 390
L D L + W E+K MADRII MRK L E L G+P W HI QIGMF ++G+ P Q
Sbjct: 347 LRDKNLFNEWTLELKAMADRIISMRKQLFEALRTRGTPGDWSHIIKQIGMFTFTGLNPAQ 406
Query: 391 VDRLTNEYHIYMTRNGRISMAGVTTGNVAYLANAIHEV 428
V +T EYHIYMT +GRISMAG+++ V +LA+AIH V
Sbjct: 407 VSFMTKEYHIYMTSDGRISMAGLSSKTVPHLADAIHAV 444
>AT5G19550.1 | chr5:6598201-6601597 FORWARD LENGTH=406
Length = 405
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/396 (50%), Positives = 273/396 (68%), Gaps = 2/396 (0%)
Query: 33 SLFGHVEPASKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGN 92
S+F +V A +DPILGVT A+ DPSP K+N+GVGAYR + GKP+VL+ VR+AE+++ +
Sbjct: 3 SVFSNVARAPEDPILGVTVAYNNDPSPVKINLGVGAYRTEEGKPLVLDVVRKAEQQLVND 62
Query: 93 LN--MEYLPMGGSIKMIEESLKLAYGEDSDFIKDKRIAAVQALSGTGACRLFADFQRRFL 150
+ EY+P+ G + S KL G DS I + R+ VQ LSGTG+ R+ A+F +
Sbjct: 63 PSRVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQCLSGTGSLRVGAEFLKTHY 122
Query: 151 PNSQIYIPTPTWSNHHNIWRDAQVPQRTFTYYHPESRGLDFAGLMDDIKNAPNGSFFLLH 210
S IYIP PTW NH ++ A + F YY P +RGLDF GL++D+ AP+G+ LLH
Sbjct: 123 HQSVIYIPKPTWGNHPKVFNLAGLSVEYFRYYDPATRGLDFKGLLEDLGAAPSGAIVLLH 182
Query: 211 ACAHNPTGVDPTEEQWREISYQFKIKNHFPFFDMAYQGFASGDPERDAKAIRIFLEDGHQ 270
ACAHNPTGVDPT EQW +I + K+ PFFD AYQGFASG + DA+++R F+ DG +
Sbjct: 183 ACAHNPTGVDPTSEQWEQIRQLMRSKSLLPFFDSAYQGFASGSLDTDAQSVRTFVADGGE 242
Query: 271 IGCAQSYAKNMGLYGQRAGCLSILCEDEMQAVSVKSQLQQIARPMYSNPPVHGALVVSII 330
AQSYAKNMGLYG+R G LSI+C+ A V+SQ++ + RPMYS+PP+HGA +V+ I
Sbjct: 243 CLIAQSYAKNMGLYGERVGALSIVCKSADVASKVESQVKLVVRPMYSSPPIHGASIVATI 302
Query: 331 LNDPELKSLWLKEVKGMADRIIGMRKALRENLEGLGSPLSWDHITNQIGMFCYSGMTPEQ 390
L ++ + W E+K MADRI MR+ L E ++ G+P W HI QIGMF ++G+ EQ
Sbjct: 303 LKSSDMYNNWTIELKEMADRIKSMRQQLFEAIQARGTPGDWSHIIKQIGMFTFTGLNKEQ 362
Query: 391 VDRLTNEYHIYMTRNGRISMAGVTTGNVAYLANAIH 426
V+ +T E+HIYMT +GRISMAG+++ V +LA+A+H
Sbjct: 363 VEFMTKEFHIYMTSDGRISMAGLSSKTVPHLADAMH 398
>AT1G62800.2 | chr1:23253934-23257416 REVERSE LENGTH=406
Length = 405
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/399 (48%), Positives = 265/399 (66%), Gaps = 2/399 (0%)
Query: 33 SLFGHVEPASKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGN 92
S+ V PA +DP+L V A DPSP K+N+ G YR + GKP+VL+ VR AE+++A +
Sbjct: 3 SILSSVLPAPEDPVLSVIFACRDDPSPVKLNLSAGTYRTEEGKPLVLDVVRRAEQQLAND 62
Query: 93 L--NMEYLPMGGSIKMIEESLKLAYGEDSDFIKDKRIAAVQALSGTGACRLFADFQRRFL 150
L + EYLP+ G + + S KL G+DS +K+ R+ Q LSGTG+ R+ A+F
Sbjct: 63 LSRDKEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLATHN 122
Query: 151 PNSQIYIPTPTWSNHHNIWRDAQVPQRTFTYYHPESRGLDFAGLMDDIKNAPNGSFFLLH 210
S I++P PTW NH I+ A + + F YY P+SRGLDF G+++D+ AP G+ +L
Sbjct: 123 KESVIFVPNPTWGNHPRIFTLAGLSVQYFRYYDPKSRGLDFKGMLEDLGAAPPGAIVVLQ 182
Query: 211 ACAHNPTGVDPTEEQWREISYQFKIKNHFPFFDMAYQGFASGDPERDAKAIRIFLEDGHQ 270
ACAHNPTGVDPT EQW +I + K+ PFFD AYQGFASG + DA+A+R+F+ DG +
Sbjct: 183 ACAHNPTGVDPTFEQWEKIRRLVRSKSLLPFFDSAYQGFASGSLDADAQAVRMFVADGGE 242
Query: 271 IGCAQSYAKNMGLYGQRAGCLSILCEDEMQAVSVKSQLQQIARPMYSNPPVHGALVVSII 330
AQSYAKNMGLYG+R G L+I+C E A V++Q+ + RPMY PP+HGA +V+ I
Sbjct: 243 CLIAQSYAKNMGLYGERIGSLTIVCTSEDVAKKVENQVLLVVRPMYLTPPIHGASIVATI 302
Query: 331 LNDPELKSLWLKEVKGMADRIIGMRKALRENLEGLGSPLSWDHITNQIGMFCYSGMTPEQ 390
L + ++ + W E+KGMADRII MR+ L LE G+P W HI IGMF ++G++ EQ
Sbjct: 303 LKNSDMYNDWTIELKGMADRIISMRQQLYAALEARGTPGDWSHIIKHIGMFTFTGLSEEQ 362
Query: 391 VDRLTNEYHIYMTRNGRISMAGVTTGNVAYLANAIHEVT 429
V + EYHIYMT +GRISMA +++ V LA+AIH V
Sbjct: 363 VRLMAKEYHIYMTYDGRISMASLSSKTVPQLADAIHAVV 401
>AT4G31990.3 | chr4:15470876-15473521 REVERSE LENGTH=463
Length = 462
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/395 (47%), Positives = 264/395 (66%), Gaps = 2/395 (0%)
Query: 33 SLFGHVEPASKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAER-RIAG 91
S F + A DPILGV+EAF AD + K+N+GVGAYR + +P VL V++AE +
Sbjct: 51 SRFEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLMLER 110
Query: 92 NLNMEYLPMGGSIKMIEESLKLAYGEDSDFIKDKRIAAVQALSGTGACRLFADFQRRFLP 151
N EYLP+ G + + +L +G IK++R+A +Q LSGTG+ RL A R+ P
Sbjct: 111 GDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYFP 170
Query: 152 NSQIYIPTPTWSNHHNIWRDAQVPQRTFTYYHPESRGLDFAGLMDDIKNAPNGSFFLLHA 211
+++ I +PTW NH NI+ DA+VP + YY P++ GLDF G++ DIK AP GSF LLH
Sbjct: 171 GAKVVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGSFILLHG 230
Query: 212 CAHNPTGVDPTEEQWREISYQFKIKNHFPFFDMAYQGFASGDPERDAKAIRIFLEDGHQI 271
CAHNPTG+DPT EQW +I+ + KNH PFFD+AYQGFASG + DA ++R+F E G +
Sbjct: 231 CAHNPTGIDPTPEQWVKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFAERGMEF 290
Query: 272 GCAQSYAKNMGLYGQRAGCLSILCEDEMQAVSVKSQLQQIARPMYSNPPVHGALVVSIIL 331
AQSY+KN+GLY +R G ++++C A VKSQL++IARPMYSNPPVHGA +V+ ++
Sbjct: 291 FVAQSYSKNLGLYAERIGAINVVCSSADAATRVKSQLKRIARPMYSNPPVHGARIVANVV 350
Query: 332 NDPELKSLWLKEVKGMADRIIGMRKALRENLEGLG-SPLSWDHITNQIGMFCYSGMTPEQ 390
D + S W E++ MA RI +R+ L ++L S W I QIGMF ++G+ Q
Sbjct: 351 GDVTMFSEWKAEMEMMAGRIKTVRQELYDSLVSKDKSGKDWSFILKQIGMFSFTGLNKAQ 410
Query: 391 VDRLTNEYHIYMTRNGRISMAGVTTGNVAYLANAI 425
D +T+++H+YMT++GRIS+AG++ YLA+AI
Sbjct: 411 SDNMTDKWHVYMTKDGRISLAGLSLAKCEYLADAI 445
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,429,910
Number of extensions: 413431
Number of successful extensions: 822
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 817
Number of HSP's successfully gapped: 5
Length of query: 432
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 331
Effective length of database: 8,337,553
Effective search space: 2759730043
Effective search space used: 2759730043
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)