BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0227400 Os02g0227400|AY785765
(602 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G32850.8 | chr4:15850134-15854443 FORWARD LENGTH=766 726 0.0
AT2G25850.2 | chr2:11026123-11030440 REVERSE LENGTH=801 724 0.0
AT1G17980.1 | chr1:6187742-6191418 REVERSE LENGTH=714 616 e-176
AT3G06560.1 | chr3:2044443-2047034 FORWARD LENGTH=508 270 1e-72
>AT4G32850.8 | chr4:15850134-15854443 FORWARD LENGTH=766
Length = 765
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/560 (63%), Positives = 425/560 (75%), Gaps = 13/560 (2%)
Query: 20 PLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKG 79
PLSLA P+ AD+ + ELEK+LV+ GLYE ++++ +REEVL IDQIVK WVK++T Q+G
Sbjct: 26 PLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLTQQRG 85
Query: 80 YSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEV 139
Y++QMV++ANAV+FTFGSYRLGVHGPGADID LC+GPSYV REE+FF++L+ L+EMEEV
Sbjct: 86 YTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEV 145
Query: 140 TELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNG 199
TEL PVPDAHVPVMKFKF+G+PIDLLYAS+SL V+P D DIS SVLC+VDE TVRSLNG
Sbjct: 146 TELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNG 205
Query: 200 CRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNA 259
CRVADQIL+LVPN E FR TLRCLKYWA++RGVYSNVTG LGGV+WALLVARVCQLYPNA
Sbjct: 206 CRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 265
Query: 260 VPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPC 319
+PSMLVSRFFRV+TQW+WPNPVMLCAIE +D LGF VWD RKN RDR H+MPIITPAYPC
Sbjct: 266 IPSMLVSRFFRVYTQWRWPNPVMLCAIE-EDELGFPVWDRRKNHRDRYHLMPIITPAYPC 324
Query: 320 MNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLXXXXXXX 379
MNSSYNVS STLRV+ EQFQFGN I QEIELNK WSSLFE + FFEAY YL
Sbjct: 325 MNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAA 384
Query: 380 XXXXLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKE 439
L WKGW+ESR RQLTLKIERDT GML CHP P EY D + Q HCAF+MGL R E
Sbjct: 385 DAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAE 444
Query: 440 GMKIRG-QKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRPP 498
G+ + Q+FDIRGTVDEF E+ MY WK GMD+ V+HVR++++P +VF G ++ R
Sbjct: 445 GVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ- 503
Query: 499 TPICAEQQDQSDKNDSE--VCTTTASLVGQLKRKYHSVGGADVDSFKSVRRASVSPACEE 556
+ Q+ E + + S+V + ++ + DV K +RAS+SP
Sbjct: 504 ----SRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSP---- 555
Query: 557 ASIQLHDDANFGLTNCSTSP 576
S+ + N +T T P
Sbjct: 556 QSLDIVSPENSAITTGWTPP 575
>AT2G25850.2 | chr2:11026123-11030440 REVERSE LENGTH=801
Length = 800
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/478 (70%), Positives = 390/478 (81%), Gaps = 2/478 (0%)
Query: 20 PLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKG 79
PLS+A P+ AD+ + ELEKFLV+ GLYE +EE+ +REEV+ IDQIVK WVK++T Q+G
Sbjct: 28 PLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLTRQRG 87
Query: 80 YSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEV 139
Y++QMV++ANAV+FTFGSYRLGVHGP ADID LC+GPSYV REE+FF+ L+EMEEV
Sbjct: 88 YTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAEMEEV 147
Query: 140 TELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNG 199
TELQPV DAHVPVMKFKF+G+ IDLLYAS+SL VIP D DIS SVLCDVDE TVRSLNG
Sbjct: 148 TELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSLNG 207
Query: 200 CRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNA 259
CRVADQIL+LVPN+E FR TLRCLKYWA++RGVYSNVTG LGGV+WALLVAR+CQ YPNA
Sbjct: 208 CRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYPNA 267
Query: 260 VPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPC 319
+PSMLVSRFFRV+TQW+WPNPVMLCAIE DD L F VWDPRKN RDR H+MPIITPAYPC
Sbjct: 268 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDD-LSFPVWDPRKNHRDRYHLMPIITPAYPC 326
Query: 320 MNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLXXXXXXX 379
MNSSYNVS STLRV+ EQFQFGN ICQEIELNK WSSLF+ + FFEAY YL
Sbjct: 327 MNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLAA 386
Query: 380 XXXXLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKE 439
L WKGW+ESR RQLTLKIERDT GML CHP P EY D S Q HCAF+MGL R +
Sbjct: 387 DAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRAD 446
Query: 440 GMKIRG-QKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTR 496
G + Q+FDIRGTVDEF E+ MY W+ GMD+ V+HVR++++P +VF G +++R
Sbjct: 447 GFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSR 504
>AT1G17980.1 | chr1:6187742-6191418 REVERSE LENGTH=714
Length = 713
Score = 616 bits (1588), Expect = e-176, Method: Compositional matrix adjust.
Identities = 287/477 (60%), Positives = 363/477 (76%), Gaps = 4/477 (0%)
Query: 20 PLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKG 79
P+S+ PT D+ KT ELEK L + GLYE +EE+ +REEVL +DQIVK W+K ++ KG
Sbjct: 16 PISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTWIKTISRAKG 75
Query: 80 YSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEV 139
++Q++ EANA +FTFGSYRLGVHGPGADID LC+GP + RE +FF L LSEM EV
Sbjct: 76 LNDQLLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRMLSEMPEV 135
Query: 140 TELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNG 199
TEL PVPDAHVP+M FK G+ IDLLYA + L VIP D D+SQ S+L + DE TVRSLNG
Sbjct: 136 TELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADEQTVRSLNG 195
Query: 200 CRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNA 259
CRV DQILRLVPN + FR TLRC+++WA+RRGVYSNV+G LGG++WALLVAR+CQLYPNA
Sbjct: 196 CRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPNA 255
Query: 260 VPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPC 319
+P++LVSRFFRVF QW WPN + LC+ ++ +LG VWDPR NP+DR H+MPIITPAYPC
Sbjct: 256 LPNILVSRFFRVFYQWNWPNAIFLCS-PDEGSLGLQVWDPRINPKDRLHIMPIITPAYPC 314
Query: 320 MNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLXXXXXXX 379
MNSSYNVS STLR++ +FQ GN+IC+ +E NKA W +LFEPF FFEAY YL
Sbjct: 315 MNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYLQIDISAA 374
Query: 380 XXXXLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKE 439
LR WKGW+ESRLRQLTLKIER K ML CHP+P ++ D S + HC+++MGL RK+
Sbjct: 375 NVDDLRKWKGWVESRLRQLTLKIERHFK-MLHCHPHPHDFQDTS-RPLHCSYFMGLQRKQ 432
Query: 440 GM-KIRGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKT 495
G+ G++FDIR TV+EF H + YT W GM+++V H++++ +P +VF G + +
Sbjct: 433 GVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGGVRPS 489
>AT3G06560.1 | chr3:2044443-2047034 FORWARD LENGTH=508
Length = 507
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 213/406 (52%), Gaps = 15/406 (3%)
Query: 30 DLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKGYSEQMVKEAN 89
D + L + +V GL E+ KR V+ ++ +IV WVK V Q + + N
Sbjct: 14 DDESSISLRQLMVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATN 73
Query: 90 AVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEVTELQPVPDAH 149
A + +GSY LGV+G +DIDALCIGP + E+FF+ L L EV+EL V DA
Sbjct: 74 ATILPYGSYGLGVYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAK 133
Query: 150 VPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNGCRVADQILRL 209
VP+++FKF G+ +DL YA + + IP + D+ L D+DE + + L+G R IL+L
Sbjct: 134 VPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQL 193
Query: 210 VPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNAVPSMLVSRFF 269
VP+ E+F+ LRC+K WA+RRGVY N+ G LGGV A+L A VC PNA S L++ FF
Sbjct: 194 VPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFF 253
Query: 270 RVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNSSYNVSTS 329
F WQWP PV+L D + +MPI P + ++ S
Sbjct: 254 YTFAHWQWPTPVVLLE------------DTYPSTGAPPGLMPIQLPCGSHQYCNSTITRS 301
Query: 330 TLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLXXXXXXXXXXXLRLWKG 389
T I+ +F G+ + ++ SW LFE + + YT + L W G
Sbjct: 302 TFYKIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVG 361
Query: 390 WIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGL 435
W++SR R L +KIE + G+ C PNP EY + + + FY GL
Sbjct: 362 WVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGL 404
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,628,942
Number of extensions: 580364
Number of successful extensions: 1390
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1380
Number of HSP's successfully gapped: 4
Length of query: 602
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 498
Effective length of database: 8,255,305
Effective search space: 4111141890
Effective search space used: 4111141890
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)