BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0222100 Os02g0222100|AK110984
(112 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G04940.1 | chr3:1365681-1367508 FORWARD LENGTH=325 91 1e-19
AT2G43750.1 | chr2:18129604-18132322 REVERSE LENGTH=393 89 4e-19
AT3G59760.1 | chr3:22072119-22075345 REVERSE LENGTH=434 89 6e-19
AT4G14880.1 | chr4:8518209-8520050 REVERSE LENGTH=323 88 9e-19
AT5G28020.1 | chr5:10026395-10028166 REVERSE LENGTH=324 87 2e-18
AT5G28030.2 | chr5:10030493-10032285 REVERSE LENGTH=324 84 1e-17
AT3G22460.1 | chr3:7963855-7965751 FORWARD LENGTH=306 81 1e-16
AT3G03630.1 | chr3:878388-880400 REVERSE LENGTH=405 80 2e-16
AT3G61440.1 | chr3:22735885-22737792 FORWARD LENGTH=369 77 2e-15
AT1G55880.1 | chr1:20899292-20901140 REVERSE LENGTH=422 46 4e-06
>AT3G04940.1 | chr3:1365681-1367508 FORWARD LENGTH=325
Length = 324
Score = 90.9 bits (224), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Query: 23 IASNITQLIGWTPLIELKNIAKKDGIAARLVGKIEPYQPLSSVKDRSALRLIEDAEERGL 82
I + TQLIG TP++ L NI DG AR+ K+E +P SSVK+R A +I+DAE++GL
Sbjct: 8 IKDDATQLIGNTPMVYLNNIV--DGCVARIAAKLEMMEPCSSVKERIAYGMIKDAEDKGL 65
Query: 83 ISPGITTLAGVTSGNLGIGVAFVAAQKG 110
I+PG +TL TSGN GIG+AF+ A KG
Sbjct: 66 ITPGKSTLIEATSGNTGIGLAFIGAAKG 93
>AT2G43750.1 | chr2:18129604-18132322 REVERSE LENGTH=393
Length = 392
Score = 89.4 bits (220), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 19 QGECIASNITQLIGWTPLIELKNIAKKDGIAARLVGKIEPYQPLSSVKDRSALRLIEDAE 78
+G IA N QLIG TP++ L N+ K G A + K+E +P SVKDR +I DAE
Sbjct: 71 EGLNIADNAAQLIGKTPMVYLNNVVK--GCVASVAAKLEIMEPCCSVKDRIGYSMITDAE 128
Query: 79 ERGLISPGITTLAGVTSGNLGIGVAFVAAQKG 110
E+GLI+PG + L TSGN GIG+AF+AA KG
Sbjct: 129 EKGLITPGKSVLVESTSGNTGIGLAFIAASKG 160
>AT3G59760.1 | chr3:22072119-22075345 REVERSE LENGTH=434
Length = 433
Score = 88.6 bits (218), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Query: 23 IASNITQLIGWTPLIELKNIAKKDGIAARLVGKIEPYQPLSSVKDRSALRLIEDAEERGL 82
IA N++QLIG TP++ L +IAK G A + K+E +P SVKDR ++ DAE++G
Sbjct: 113 IADNVSQLIGKTPMVYLNSIAK--GCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGF 170
Query: 83 ISPGITTLAGVTSGNLGIGVAFVAAQKG 110
ISPG + L TSGN GIG+AF+AA +G
Sbjct: 171 ISPGKSVLVEPTSGNTGIGLAFIAASRG 198
>AT4G14880.1 | chr4:8518209-8520050 REVERSE LENGTH=323
Length = 322
Score = 87.8 bits (216), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Query: 23 IASNITQLIGWTPLIELKNIAKKDGIAARLVGKIEPYQPLSSVKDRSALRLIEDAEERGL 82
IA ++T+LIG TPL+ L N+A +G R+ K+E +P SSVKDR +I DAE++GL
Sbjct: 5 IAKDVTELIGNTPLVYLNNVA--EGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGL 62
Query: 83 ISPGITTLAGVTSGNLGIGVAFVAAQKG 110
I PG + L TSGN G+G+AF AA KG
Sbjct: 63 IKPGESVLIEPTSGNTGVGLAFTAAAKG 90
>AT5G28020.1 | chr5:10026395-10028166 REVERSE LENGTH=324
Length = 323
Score = 86.7 bits (213), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 23 IASNITQLIGWTPLIELKNIAKKDGIAARLVGKIEPYQPLSSVKDRSALRLIEDAEERGL 82
I ++IT+LIG TP++ L N+ DG AR+ K+E +P SSVKDR A +I+DAE++GL
Sbjct: 7 IKNDITELIGNTPMVYLNNVV--DGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGL 64
Query: 83 ISPGITTLAGVTSGNLGIGVAFVAAQKG 110
I+PG +TL T+GN GIG+A + A +G
Sbjct: 65 ITPGKSTLIEPTAGNTGIGLACMGAARG 92
>AT5G28030.2 | chr5:10030493-10032285 REVERSE LENGTH=324
Length = 323
Score = 84.0 bits (206), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Query: 23 IASNITQLIGWTPLIELKNIAKKDGIAARLVGKIEPYQPLSSVKDRSALRLIEDAEERGL 82
I +++T+LIG TP++ L I DG AR+ K+E +P SS+KDR A +I+DAE++GL
Sbjct: 7 IKNDVTELIGNTPMVYLNKIV--DGCVARIAAKLEMMEPCSSIKDRIAYSMIKDAEDKGL 64
Query: 83 ISPGITTLAGVTSGNLGIGVAFVAAQKG 110
I+PG +TL T GN GIG+A + A +G
Sbjct: 65 ITPGKSTLIEATGGNTGIGLASIGASRG 92
>AT3G22460.1 | chr3:7963855-7965751 FORWARD LENGTH=306
Length = 305
Score = 80.9 bits (198), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 16 LSSQGECIASNITQLIGWTPLIELKNIAKKDGIAARLVGKIEPYQPLSSVKDRSALRLIE 75
++S IA ++T+LIG TPL+ L +AK + K+E +P SSVKDR +I
Sbjct: 1 MASVAPKIAKDVTELIGNTPLVYLNKVAKD--CVGHVAAKLEMMEPCSSVKDRIGYSMIA 58
Query: 76 DAEERGLISPGITTLAGVTSGNLGIGVAFVAAQKG 110
DAE +GLI PG + L TSGN G+G+AF AA KG
Sbjct: 59 DAEAKGLIKPGESVLIEPTSGNTGVGLAFTAAAKG 93
>AT3G03630.1 | chr3:878388-880400 REVERSE LENGTH=405
Length = 404
Score = 80.5 bits (197), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 18 SQGECIASNITQLIGWTPLIELKNIAKKDGIAARLVGKIEPYQPLSSVKDRSALRLIEDA 77
S+ IA ++TQLIG TP++ L + DG A + K+E +P SVKDR L +I +A
Sbjct: 94 SETVNIAEDVTQLIGSTPMVYLNRVT--DGCLADIAAKLESMEPCRSVKDRIGLSMINEA 151
Query: 78 EERGLISPGITTLAGVTSGNLGIGVAFVAAQKG 110
E G I+P T L T+GN G+G+AFVAA KG
Sbjct: 152 ENSGAITPRKTVLVEPTTGNTGLGIAFVAAAKG 184
>AT3G61440.1 | chr3:22735885-22737792 FORWARD LENGTH=369
Length = 368
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 30 LIGWTPLIELKNIAKKDGIAARLVGKIEPYQPLSSVKDRSALRLIEDAEERGLISPGITT 89
LIG TPL+ L + +G A + K E +QP S+KDR A+ +I DAE++ LI PG TT
Sbjct: 56 LIGKTPLVFLNKVT--EGCEAYVAAKQEHFQPTCSIKDRPAIAMIADAEKKKLIIPGKTT 113
Query: 90 LAGVTSGNLGIGVAFVAAQKG 110
L TSGN+GI +AF+AA KG
Sbjct: 114 LIEPTSGNMGISLAFMAAMKG 134
>AT1G55880.1 | chr1:20899292-20901140 REVERSE LENGTH=422
Length = 421
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 27 ITQLIGWTPLIELKNIAKKDGIAARLVGKIEPYQPLSSVKDRSALRLIEDAEERGLISPG 86
+ IG TPLI + ++++ G ++GK E P SVKDR A+++I++A E G + PG
Sbjct: 44 LVDAIGNTPLIRINSLSEATG--CEILGKCEFLNPGGSVKDRVAVKIIQEALESGKLFPG 101
Query: 87 ITTLAGVTSGNLGIGVAFVAAQKG 110
G ++G+ I +A VA G
Sbjct: 102 GIVTEG-SAGSTAISLATVAPAYG 124
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.134 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,109,496
Number of extensions: 72790
Number of successful extensions: 155
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 147
Number of HSP's successfully gapped: 10
Length of query: 112
Length of database: 11,106,569
Length adjustment: 81
Effective length of query: 31
Effective length of database: 8,885,873
Effective search space: 275462063
Effective search space used: 275462063
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 104 (44.7 bits)