BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0214300 Os02g0214300|Os02g0214300
         (302 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G74700.1  | chr1:28065345-28067130 FORWARD LENGTH=281          408   e-114
AT2G04530.1  | chr2:1576808-1578611 FORWARD LENGTH=355            332   1e-91

>AT1G74700.1 | chr1:28065345-28067130 FORWARD LENGTH=281
          Length = 280

 Score =  408 bits (1049), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 182/274 (66%), Positives = 231/274 (84%)

Query: 29  LTVEGYPVEGISIGGQETCVIFPTLSAAFDIGRCPQRAVSQEFLFISHAHLDHIGGLPMY 88
           + +EGYP+EG+SIGG ETC+IFP+L  AFDIGRCP RA+SQ+FLFISH+H+DHIGGLPMY
Sbjct: 7   MQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHIGGLPMY 66

Query: 89  VATRGLYRQRPPTIFIPACLRDPVERLFELHRSMDQSELSHNLVPLEIGQEHELRRDLKV 148
           VATRGLY+ +PPTI +PA +++ VE LFE+HR +D SEL HNLV L+IG+E  +R+DLKV
Sbjct: 67  VATRGLYKMKPPTIIVPASIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFIIRKDLKV 126

Query: 149 KAFKTYHAIPSQGYVIYTVKQKLKPEYLGLPGSEIKQLKLSGVEITNTLTVPEIAFTGDT 208
           KAFKT+H I SQGYV+Y+ K KLK EY+GL G+EIK LK+SGVEIT+++  PE+AFTGDT
Sbjct: 127 KAFKTFHVIQSQGYVVYSTKYKLKKEYIGLSGNEIKNLKVSGVEITDSIITPEVAFTGDT 186

Query: 209 MADFILDPDNADVLKAKILVVESTFVDDSVTIEHAREYGHTHLFEILNQCDKLENKAILL 268
            +DF++D  NAD LKAK+LV+ESTF+DDSV++EHAR+YGH H+ EI+N  +K ENKAILL
Sbjct: 187 TSDFVVDETNADALKAKVLVMESTFLDDSVSVEHARDYGHIHISEIVNHAEKFENKAILL 246

Query: 269 IHFSARYTAEEIDIAINKLPPSFRSRVHALKEGF 302
           IHFSARYT +EI+ A++ LPP    RV AL +GF
Sbjct: 247 IHFSARYTVKEIEDAVSALPPPLEGRVFALTQGF 280



>AT2G04530.1 | chr2:1576808-1578611 FORWARD LENGTH=355
          Length = 354

 Score =  332 bits (852), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 150/272 (55%), Positives = 205/272 (75%)

Query: 31  VEGYPVEGISIGGQETCVIFPTLSAAFDIGRCPQRAVSQEFLFISHAHLDHIGGLPMYVA 90
           +E Y +EGIS+GG ETCVI P L   FDIGRCP RA+ Q+FLFI+HAHLDHIGGLPMYVA
Sbjct: 78  LESYAIEGISVGGHETCVIVPELKCVFDIGRCPSRAIQQKFLFITHAHLDHIGGLPMYVA 137

Query: 91  TRGLYRQRPPTIFIPACLRDPVERLFELHRSMDQSELSHNLVPLEIGQEHELRRDLKVKA 150
           +RGLY   PP IF+P  +++ VE+L E+HR+M Q EL+  L+PL +G+ +ELR D+ V+ 
Sbjct: 138 SRGLYNLEPPKIFVPPSIKEDVEKLLEIHRTMGQVELNVELIPLAVGETYELRNDIVVRP 197

Query: 151 FKTYHAIPSQGYVIYTVKQKLKPEYLGLPGSEIKQLKLSGVEITNTLTVPEIAFTGDTMA 210
           F T+H IPSQGYVIY+V++KL+ +Y  L G +I+++K SGVEIT+T+  PEIAFTGDT +
Sbjct: 198 FATHHVIPSQGYVIYSVRKKLQKQYAHLKGKQIEKIKKSGVEITDTILSPEIAFTGDTTS 257

Query: 211 DFILDPDNADVLKAKILVVESTFVDDSVTIEHAREYGHTHLFEILNQCDKLENKAILLIH 270
           +++LDP NAD L+AK+L+ E+TF+D+S + EHA+  GHTH+ +I+     + +K +LL H
Sbjct: 258 EYMLDPRNADALRAKVLITEATFLDESFSTEHAQALGHTHISQIIENAKWIRSKTVLLTH 317

Query: 271 FSARYTAEEIDIAINKLPPSFRSRVHALKEGF 302
           FS+RY  EEI  A+ KL     ++V  L EGF
Sbjct: 318 FSSRYHVEEIREAVLKLQSKVSAKVIPLTEGF 349



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.139    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,966,423
Number of extensions: 239982
Number of successful extensions: 486
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 486
Number of HSP's successfully gapped: 2
Length of query: 302
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 204
Effective length of database: 8,419,801
Effective search space: 1717639404
Effective search space used: 1717639404
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)