BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0208700 Os02g0208700|Os02g0208700
(375 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G80440.1 | chr1:30241763-30242827 FORWARD LENGTH=355 152 4e-37
AT1G15670.1 | chr1:5390119-5391198 FORWARD LENGTH=360 150 1e-36
AT2G44130.1 | chr2:18253731-18254960 FORWARD LENGTH=410 122 4e-28
AT3G59940.1 | chr3:22143009-22144265 FORWARD LENGTH=419 101 6e-22
AT2G02870.1 | chr2:838378-839781 FORWARD LENGTH=468 62 6e-10
AT1G26930.1 | chr1:9336211-9337476 REVERSE LENGTH=422 62 6e-10
AT1G14330.1 | chr1:4890375-4891700 REVERSE LENGTH=442 60 2e-09
AT1G74510.2 | chr1:28006065-28007420 FORWARD LENGTH=452 58 7e-09
AT3G27150.1 | chr3:10009692-10010960 REVERSE LENGTH=423 57 1e-08
AT3G63220.2 | chr3:23357540-23358598 REVERSE LENGTH=353 54 1e-07
AT5G60570.1 | chr5:24348713-24349894 FORWARD LENGTH=394 54 2e-07
AT1G16250.1 | chr1:5557214-5558697 FORWARD LENGTH=384 51 1e-06
>AT1G80440.1 | chr1:30241763-30242827 FORWARD LENGTH=355
Length = 354
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 116/224 (51%), Gaps = 16/224 (7%)
Query: 58 FCQLAAVAACXXXXXXXXXXXXWDPETWAPTDAVHVYDFLSGSWRRGAAMPGPRRSFFAC 117
FC+L +V + DP TW D+V V+ FL+ WR GA MPG RRSFF C
Sbjct: 106 FCRLVSVGS------DLIVLGGLDPITWQAHDSVFVFSFLTSKWRVGATMPGVRRSFFGC 159
Query: 118 AA-VGRWVFVAGGHDEEKNALRSAVAYDAEADAWVPLPDMAAERDEARGVCVGGRFVAVG 176
A+ R V VAGGH+EEK AL SA+ YD D W LPDMA ERDE + V GRF +G
Sbjct: 160 ASDSDRTVLVAGGHNEEKCALTSAMVYDVSEDKWTFLPDMARERDECKAVFHAGRFHVIG 219
Query: 177 GYPTEAQGRFAGSAEAFDPAAWAWGPVQERVLDEXXXXXXXXXXXXXXXXXXMYMLRDGH 236
GY TE QG+F+ +AE+FD + W WGP+ E LD+ +Y G
Sbjct: 220 GYATEEQGQFSKTAESFDVSTWEWGPLTEDFLDD---TGDTVSPPTCVAGGDLYACWGG- 275
Query: 237 LAARDATNNGGAAWRAVASLPEDGRAVTALAAIGDGRVVAIGAG 280
D W+ V +P D VT + A+ G ++ IG G
Sbjct: 276 ----DVMMFLNDKWQKVGQIPADVYNVTYV-AVRPGMLIVIGNG 314
>AT1G15670.1 | chr1:5390119-5391198 FORWARD LENGTH=360
Length = 359
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 114/227 (50%), Gaps = 14/227 (6%)
Query: 58 FCQLAAVAACXXXXXXXXXXXXWDPETWAPTDAVHVYDFLSGSWRRGAAMPGPRRSFFAC 117
FC+L +V + DP TW +D+V V+ FL+ +WR G +MPG RSFFAC
Sbjct: 110 FCRLVSVGS------DLVVLCGLDPVTWRTSDSVFVFSFLTSTWRVGKSMPGGPRSFFAC 163
Query: 118 AA-VGRWVFVAGGHDEEKNALRSAVAYDAEADAWVPLPDMAAERDEARGVCVGGRFVAVG 176
A+ R VFVAGGHDE+KNA+ SA+ YD D W LPDM ERDE + G+F +G
Sbjct: 164 ASDSQRNVFVAGGHDEDKNAMMSALVYDVAEDRWAFLPDMGRERDECTAIFHAGKFHVIG 223
Query: 177 GYPTEAQGRFAGSAEAFDPAAWAWGPVQERVLDEXXXXXXXXXXXXXXXXXXMYMLRDGH 236
GY TE QG+F+ +AE+FD W W P E L RD
Sbjct: 224 GYSTEEQGQFSKTAESFDVTTWRWSPQGEEFLSSEMTMWPPICAAGENGDLYACCRRDLM 283
Query: 237 LAARDATNNGGAAWRAVASLPEDGRAVTALAAIGDGRVVAIGAGSHG 283
+ D W V +LP D V+ +A G +V IG+ +G
Sbjct: 284 MMKDD-------TWYKVGNLPADVCNVSYVAIRRSGNLVVIGSARYG 323
>AT2G44130.1 | chr2:18253731-18254960 FORWARD LENGTH=410
Length = 409
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 78/127 (61%), Gaps = 4/127 (3%)
Query: 80 WDPETWAPTDAVHVYDFLSGSWRRGAAMPGPRRSFFACAAVG-RWVFVAGGHDEEKNALR 138
WDPET PT V+V +F WRRGA M RSFFACA+V V+VAGGHD++KNALR
Sbjct: 158 WDPETLQPTRDVYVLEFAGRKWRRGAPM-KESRSFFACASVSPTKVYVAGGHDDQKNALR 216
Query: 139 SAVAYDAEADAWVPLPDMAAERDEARGVCVGG--RFVAVGGYPTEAQGRFAGSAEAFDPA 196
SA YD E D W + M RDE +G VG RF + GY TE+QGRF E +DPA
Sbjct: 217 SAEVYDVEKDEWSSVTPMTEGRDECQGFAVGMGLRFCVLSGYGTESQGRFRSDGEIYDPA 276
Query: 197 AWAWGPV 203
+W +
Sbjct: 277 TDSWSRI 283
>AT3G59940.1 | chr3:22143009-22144265 FORWARD LENGTH=419
Length = 418
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 70/133 (52%), Gaps = 7/133 (5%)
Query: 80 WDPETWAPTDAVHVYDFLSGSWRRGAAMP----GPRRSFFACAAVGRW-VFVAGGHDEEK 134
WDPET P V V DF +G RSFFACA+VG V+VAGGHD++K
Sbjct: 160 WDPETLQPVRDVFVLDFFAGEGSGRRFRRGRPMSAARSFFACASVGSTKVYVAGGHDDQK 219
Query: 135 NALRSAVAYDAEADAWVPLPDMAAERDEARGVCVGGR--FVAVGGYPTEAQGRFAGSAEA 192
NALRSA YD E D W LP M RDE G + F + GY TE QG+F E
Sbjct: 220 NALRSAEVYDVEKDEWSMLPPMTEGRDECHGFSMATDPGFCVLSGYGTETQGQFRSDGEI 279
Query: 193 FDPAAWAWGPVQE 205
+DP +W ++
Sbjct: 280 YDPITNSWSTIEN 292
>AT2G02870.1 | chr2:838378-839781 FORWARD LENGTH=468
Length = 467
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Query: 90 AVHVYDFLSGSWRRGAAMPGPRRSFFACAAVGRWVFVAGGHDEEKNALRSAVAYDAEADA 149
++ Y L+ SW G M PR F A++G AGG D + L A Y++E
Sbjct: 228 VIYRYSLLTNSWSSGMKMNSPR-CLFGSASLGEIAIFAGGCDSQGKILDFAEMYNSELQT 286
Query: 150 WVPLPDMAAERDEARGVCVGGRFVAVGGY-PTEAQGRFAGSAEAFDPAAWAWGP 202
W+ LP M R GV + G+F +GG +++G G + W P
Sbjct: 287 WITLPRMNKPRKMCSGVFMDGKFYVIGGIGGADSKGLTCGEEYDLETKKWTQIP 340
>AT1G26930.1 | chr1:9336211-9337476 REVERSE LENGTH=422
Length = 421
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 80/213 (37%), Gaps = 16/213 (7%)
Query: 90 AVHVYDFLSGSWRRGAAMPGPRRSFFACAAVGRWVFVAGGHDEEKNALRSAVAYDAEADA 149
++ Y L+ SW +M PR F A+ G +AGG D L +A Y+ E
Sbjct: 181 VIYRYSLLTNSWSTAKSMNMPR-CLFGSASYGEIAVLAGGCDSSGRILDTAELYNYEDQT 239
Query: 150 WVPLPDMAAERDEARGVCVGGRFVAVGGYPT--EAQGRFAGSAEAFDPAAWAWGPVQERV 207
W+ LP M R GV + G+F +GG E + + E FD W + E
Sbjct: 240 WLVLPGMNKRRKMCSGVFMDGKFYVIGGIGVGEENEPKVLTCGEEFDLKTRKWTEIPE-- 297
Query: 208 LDEXXXXXXXXXXXXXXXXXXMYMLRDGHLAARDA------TNNGGAAWRAVASLPEDGR 261
+ + ++ D AA A + W V +LPE
Sbjct: 298 MSPPRSNQGNGMSAAAMAPPLVAVVNDQLYAADHAGMAVRRYDKEKRVWNKVGNLPEQAG 357
Query: 262 AVT----ALAAIGDGRVVAIGAGSHGGEQAVYL 290
++ A A GD R++ IG GE + L
Sbjct: 358 SMNGWGLAFRACGD-RIIVIGGPKAPGEGFIEL 389
>AT1G14330.1 | chr1:4890375-4891700 REVERSE LENGTH=442
Length = 441
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Query: 88 TDAVHVYDFLSGSWRRGAAMPGPRRSFFACAAVGRWVFVAGGHDEEKNALRSAVAYDAEA 147
+ ++ Y L+ SW G M PR F A++G AGG D SA Y++E
Sbjct: 203 SHVIYRYSLLTNSWSSGMRMNSPR-CLFGSASLGEIAIFAGGFDSFGKISDSAEMYNSEL 261
Query: 148 DAWVPLPDMAAERDEARGVCVGGRFVAVGGYPTEAQGRFAGSAEAFDPAAWAWGPVQE 205
W LP M R GV + G+F +GG + E FD W + E
Sbjct: 262 QTWTTLPKMNKPRKMCSGVFMDGKFYVIGGIGGN-DSKVLTCGEEFDLETKKWTEIPE 318
>AT1G74510.2 | chr1:28006065-28007420 FORWARD LENGTH=452
Length = 451
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 2/113 (1%)
Query: 88 TDAVHVYDFLSGSWRRGAAMPGPRRSFFACAAVGRWVFVAGGHDEEKNALRSAVAYDAEA 147
+ ++ Y L+ +W G M PR F A++G +AGG D L SA Y++E
Sbjct: 203 SHVIYRYSILTNTWTSGMQMNVPR-CLFGSASLGEIAVIAGGCDPRGRILSSAELYNSET 261
Query: 148 DAWVPLPDMAAERDEARGVCVGGRFVAVGGYPTEAQGRFAGSAEAFDPAAWAW 200
W +P M R V + G F +GG E + E +D W
Sbjct: 262 GEWTVIPSMNKARKMCSSVFMDGNFYCIGGI-GEGNSKMLLCGEVYDLKKKTW 313
>AT3G27150.1 | chr3:10009692-10010960 REVERSE LENGTH=423
Length = 422
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 18/196 (9%)
Query: 94 YDFLSGSWRRGAAMPGPRRSFFACAAVGRWVFVAGGHDEEKNALRSAV----AYDAEADA 149
Y+ + W +G AM PR FA A G VFVAGG E N V YD++
Sbjct: 185 YELETSKWFKGPAMITPR-ILFASATCGTVVFVAGGLKIEGNGTMEVVDSVEKYDSKTKT 243
Query: 150 WVPLPDMAAERDEARGVCVGGRFVAVGGYPTEAQGRFAGSAEAFDPAAWAWGPVQERVLD 209
W L M R G + G+F +GG Q G E++D W + + +L
Sbjct: 244 WTLLRGMHKRRKFCSGCYLRGKFYVLGGRDENGQNLTCG--ESYDEKTNTWELIPD-ILK 300
Query: 210 EXXXXXXXXXXXXXXXXXXMYMLRD--GHLAARDATNNGGAAWRAVASLPEDGRAV---- 263
+ +Y L L DA N +W+ + +P ++
Sbjct: 301 DMSFSSVQSPPLIAVVGDDLYSLETSANELRVYDANAN---SWKKLGDVPVRAKSNGGWG 357
Query: 264 TALAAIGDGRVVAIGA 279
A ++GD +++ IGA
Sbjct: 358 VAFKSLGD-KLLVIGA 372
>AT3G63220.2 | chr3:23357540-23358598 REVERSE LENGTH=353
Length = 352
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 88 TDAVHVYDFLSGSWRRGAAMPGPRRSFFACAAVGRWVFVAGGHDEEKNALRSAVAYDAEA 147
TD V YDF+ W A+M PR F C G+ + VAGG + ++ A YD E
Sbjct: 134 TDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGK-IVVAGGFTTCRKSISGAEMYDPEN 192
Query: 148 DAWVPLPDMAAERDEA-RGVCVGGR 171
D W +PD+ + A G+ V G+
Sbjct: 193 DVWTSIPDLHQTHNSACSGLVVNGK 217
>AT5G60570.1 | chr5:24348713-24349894 FORWARD LENGTH=394
Length = 393
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 90 AVHVYDFLSGSWRRGAAMPGPRRSFFACAAVGRWVFVAGGHDEEKNALRSAVAYDAEADA 149
A+ Y S W + M PR FA ++G VAGG D N L SA YD+ +
Sbjct: 159 AIWKYSLRSRCWVKCEGMHRPR-CLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSGR 217
Query: 150 WVPLPDMAAERDEARGVCVGGRFVAVGGYPTEAQGRFAGSAEAFDPAAWAWGPVQ 204
W LP+M + R G + G+F +GG + G E FD W ++
Sbjct: 218 WEMLPNMHSPRRLCSGFFMDGKFYVIGGMSSPNVSVTFG--EEFDLETRKWRKIE 270
>AT1G16250.1 | chr1:5557214-5558697 FORWARD LENGTH=384
Length = 383
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 88 TDAVHVYDFLSGSWRRGAAMPGPRRSFFACAAVGRWVFVAGGHD-EEKNALRSAVAYDAE 146
T V +D W+ A+M PR + FAC +V V+VAGG + + SA YD
Sbjct: 132 TKDVMRFDPFKKQWKMVASMRTPR-THFACTSVSGKVYVAGGRNLTHSRGIPSAEVYDPV 190
Query: 147 ADAWVPLPDMAAERDEARGVCVGGRFVAVGGYPTEAQGRFAGSAEAFDPAAWAWGPVQE 205
AD W LP M + + G+ G F + A+ S+E F+P W V++
Sbjct: 191 ADRWEELPAMPRPQMDCSGLSYRGCFHVLSDQVGFAE---QNSSEVFNPRDMTWSTVED 246
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,787,256
Number of extensions: 256333
Number of successful extensions: 646
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 642
Number of HSP's successfully gapped: 12
Length of query: 375
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 275
Effective length of database: 8,364,969
Effective search space: 2300366475
Effective search space used: 2300366475
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)