BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0199300 Os02g0199300|AK064726
(211 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G26555.1 | chr4:13404622-13406178 REVERSE LENGTH=208 213 7e-56
AT4G19830.1 | chr4:10772579-10773933 REVERSE LENGTH=230 70 8e-13
AT5G13410.1 | chr5:4299830-4301706 REVERSE LENGTH=257 57 7e-09
AT5G45680.1 | chr5:18530894-18532128 FORWARD LENGTH=209 55 3e-08
AT3G60370.1 | chr3:22315000-22316533 REVERSE LENGTH=243 53 1e-07
AT1G73655.1 | chr1:27690468-27691781 REVERSE LENGTH=235 52 2e-07
AT4G39710.1 | chr4:18427249-18428325 REVERSE LENGTH=218 52 2e-07
AT3G12340.1 | chr3:3925720-3929346 REVERSE LENGTH=500 51 5e-07
AT3G10060.1 | chr3:3102291-3103801 FORWARD LENGTH=231 50 8e-07
AT5G05420.1 | chr5:1604040-1604823 REVERSE LENGTH=144 49 2e-06
AT2G43560.1 | chr2:18073995-18075385 REVERSE LENGTH=224 47 9e-06
>AT4G26555.1 | chr4:13404622-13406178 REVERSE LENGTH=208
Length = 207
Score = 213 bits (541), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 99/133 (74%), Positives = 116/133 (87%)
Query: 79 EPDVIRYRKLDSGVKLEDVVDGEGPEAREGDVVQFNYVCRRANGYFVHSTVDQFSGESKP 138
EP+VIR KL SGV+ +++++GEG EA EGD+V+ NYVCRRANGYFVHSTVDQFSGES P
Sbjct: 75 EPEVIRTLKLPSGVRYQEIIEGEGREAHEGDLVELNYVCRRANGYFVHSTVDQFSGESSP 134
Query: 139 VTLALDGKEMIRGLKDVIVGMKTGGKRRALIPPQVGYTDESLQPIPEEFGPRRSLLSHAK 198
V L LD ++I GLK+V+VGMK GGKRRALIPP VGY +E+L+PIPEEFGPRRSLLSHA
Sbjct: 135 VKLILDENDVIEGLKEVLVGMKAGGKRRALIPPSVGYINETLKPIPEEFGPRRSLLSHAN 194
Query: 199 EPLVFEVQLLKVL 211
EPLVFE+QLLKVL
Sbjct: 195 EPLVFEIQLLKVL 207
>AT4G19830.1 | chr4:10772579-10773933 REVERSE LENGTH=230
Length = 229
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 17/137 (12%)
Query: 91 GVKLEDVVDGEGPEAREGDVVQFNYVCRRA--NGYFVHSTVDQ--FSGESKPVTLALDGK 146
GVK D+ G+G EGD ++ +Y R A G+ ST D +GE+ P T L
Sbjct: 88 GVKALDLRIGDGDVPIEGDQIEIHYYGRLAAKQGWRFDSTYDHKDSNGEAVPFTFVLGSS 147
Query: 147 EMIRGLKDVIVGMKTGGKRRALIPPQVGYTDESLQPIPEEFGPRRSLLSHAKEP------ 200
++I G++ + MK GG RR +IPP GY + S +P+P F R+ L + P
Sbjct: 148 KVIPGIETAVRSMKVGGIRRVVIPPSQGYQNTSQEPLPPNFFDRQRLFTTIFNPTRLANG 207
Query: 201 -------LVFEVQLLKV 210
LVF+++L+
Sbjct: 208 EGSTLGTLVFDIELVST 224
>AT5G13410.1 | chr5:4299830-4301706 REVERSE LENGTH=257
Length = 256
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 36/172 (20%)
Query: 68 FAHMPA-------RAATLEPDVIRYRKLDSGVKLEDVVDGEGPEAREGDVVQFNYVCRRA 120
FA MPA + PD Y + SG++ +D+ G GP A++GD V ++
Sbjct: 91 FADMPALKGKDYGKTKMKYPD---YTETQSGLQYKDLRVGTGPIAKKGDKVVVDW----- 142
Query: 121 NGYFV-----------HSTVDQFSGESKPV-TLALDGKEMIRGLKDVIVGMKTGGKRRAL 168
+GY + + F G+ K L E+I ++ + GM GG RR +
Sbjct: 143 DGYTIGYYGRIFEARNKTKGGSFEGDDKEFFKFTLGSNEVIPAFEEAVSGMALGGIRRII 202
Query: 169 IPPQVGYTDESLQ---PIPEEFGPRRSL------LSHAKEPLVFEVQLLKVL 211
+PP++GY D P P F +R+L + L+F+V+LLK++
Sbjct: 203 VPPELGYPDNDYNKSGPRPMTFSGQRALDFVLRNQGLIDKTLLFDVELLKIV 254
>AT5G45680.1 | chr5:18530894-18532128 FORWARD LENGTH=209
Length = 208
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 75 AATLEPDVIRYRKLDSGVKLEDVVDGEGPEAREGDVVQFNYVCRRANGYFVHSTVDQFSG 134
+A E + SG+ D V G GPEA +G +++ +YV + NG S+ ++
Sbjct: 76 SALAETTSCEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNR--- 132
Query: 135 ESKPVTLALDGKEMIRGLKDVIVG------MKTGGKRRALIPPQVGYTD 177
KP+T + E+I+G I+G M TGGKR IPP++ Y D
Sbjct: 133 -GKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGD 180
>AT3G60370.1 | chr3:22315000-22316533 REVERSE LENGTH=243
Length = 242
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 85 YRKLDSGVKLEDVVDGEGPEAREGDVVQFNYVCRRANGYFVHSTVDQFSGESKPVTLALD 144
Y K DSG+ D G+G ++G V F+Y+ +G + ST Q S P + +
Sbjct: 115 YIKADSGLIYRDFNVGQGDFPKDGQQVTFHYIGYNESGRRIDSTYIQGS----PARIRMG 170
Query: 145 GKEMIRGLKDVIVGMKTGGKRRALIPPQVGYTDESLQPIPEEFGPRRSLLSHAKEPLVFE 204
++ G + I MK GG+RR +IPP++G P+ GP S +K+ VF+
Sbjct: 171 TNALVPGFEMGIRDMKPGGRRRIIIPPELG------PPV----GP--STFFSSKQFEVFD 218
Query: 205 VQLLKV 210
V+LL +
Sbjct: 219 VELLSI 224
>AT1G73655.1 | chr1:27690468-27691781 REVERSE LENGTH=235
Length = 234
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 88 LDSGVKLEDVVDGEGPEAREGDVVQFNYVCRRANGYFVHST----VDQFSGESKPVTLAL 143
L +G++ D+ G G G +V F+ + VH T VD F G+ K + + +
Sbjct: 110 LPNGIRYYDLQVGSGATPSSGYLVVFDVKGQ------VHGTEQVFVDTFGGKGKSLAMVM 163
Query: 144 DG----KEMIRGLKDVIVGMKTGGKRRALIPPQVGYTDESLQ 181
D K + +G++ V+ MK GGKRR +IPP +G+ D +++
Sbjct: 164 DSRPYSKGLCQGIEHVLRSMKAGGKRRVIIPPSLGFGDRNVE 205
>AT4G39710.1 | chr4:18427249-18428325 REVERSE LENGTH=218
Length = 217
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 10/109 (9%)
Query: 76 ATLEPDVIRYRKLDSGVKLEDVVDGEGPEAREGDVVQFNYVCRRANGYFVHSTVDQFSGE 135
AT+ + Y SG+ D+ G G EA G +V +Y R A+G S+ +
Sbjct: 80 ATVGDPLCEYSYAKSGLGFCDLDVGFGDEAPRGVLVNIHYTARFADGTLFDSSYKR---- 135
Query: 136 SKPVTLALDGKEMIRGLKDVIVG------MKTGGKRRALIPPQVGYTDE 178
++P+T+ + ++IRGL I+G M+ GGKR+ IPP++ Y E
Sbjct: 136 ARPLTMRIGVGKVIRGLDQGILGGEGVPPMRVGGKRKLQIPPKLAYGPE 184
>AT3G12340.1 | chr3:3925720-3929346 REVERSE LENGTH=500
Length = 499
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 21/144 (14%)
Query: 70 HMPARAATLEPDVIRYRKLDSGVKLEDVVDG--EGPEAREGDVVQFNYVCR-RANGYFVH 126
++ A T +P + R L +GV +ED+ G +G A +G V Y + + G
Sbjct: 373 NIEKEAGTKKP--LETRTLSNGVIIEDIEKGKLDGKSAVKGKKVSILYTGKLKDTGNLFD 430
Query: 127 STVDQFSGESKPVTLALDGKEMIRGLKDVIVGMKTGGKRRALIPPQVGYTDESLQPIPEE 186
S + GE P+ L G+ +I GL + GM+ G KRR +IPP +GY+ L+ E
Sbjct: 431 SNL----GED-PLRFRLGGENVIEGLSIGVEGMRVGDKRRLIIPPALGYSKRGLK----E 481
Query: 187 FGPRRSLLSHAKEPLVFEVQLLKV 210
P+ + LV+EV+ +K+
Sbjct: 482 KVPKSAW-------LVYEVEAVKI 498
>AT3G10060.1 | chr3:3102291-3103801 FORWARD LENGTH=231
Length = 230
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 85 YRKLDSGVKLEDVVDGEGPEAREGDVVQFNYVCRRANGYFVHSTVDQFSGESKPVTLALD 144
+ L +G+K D+ G G EA +G V +YV + F+ S G P +
Sbjct: 100 FTTLPNGLKYYDIKVGNGAEAVKGSRVAVHYVAKWKGITFMTSRQGLGVGGGTPYGFDVG 159
Query: 145 GKE---MIRGLKDVIVGMKTGGKRRALIPPQVGYTDESLQPIP 184
E +++GL + GM+ GG+R ++PP++ Y + +Q IP
Sbjct: 160 QSERGNVLKGLDLGVEGMRVGGQRLVIVPPELAYGKKGVQEIP 202
>AT5G05420.1 | chr5:1604040-1604823 REVERSE LENGTH=144
Length = 143
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 102 GPEAREGDVVQFNYVCR-RANGYFVHSTVDQFSGESKPVTLALDGKEMIRGLKDVIVGMK 160
G +A G V +Y + + NG STV G+S+ LD ++I+GL + GM
Sbjct: 50 GKKAEPGKRVSVHYTGKLQGNGKIFDSTV----GKSR-YKFRLDAGKVIKGLDVGLNGML 104
Query: 161 TGGKRRALIPPQVGYTDESLQPIPEEFGPRRSLLSHAKEPLVFEVQLLKV 210
GGKR+ IPP++GY E IP + LVF+V+LL V
Sbjct: 105 VGGKRKLTIPPEMGYGAEGAGSIPPD------------SWLVFDVELLNV 142
>AT2G43560.1 | chr2:18073995-18075385 REVERSE LENGTH=224
Length = 223
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 89 DSGVKLEDVVDGEGPEAREGDVVQFNYVCRRANGYFVHSTVDQFSGESKPVTLALDGKEM 148
+SG++ +D+ G GP G V NYV +G S++++ P + ++
Sbjct: 105 ESGLQYKDIKVGRGPSPPVGFQVAANYVAMVPSGQIFDSSLEK----GLPYLFRVGSGQV 160
Query: 149 IRGLKDVIVGMKTGGKRRALIP 170
I+GL + I+ MK GGKRR IP
Sbjct: 161 IKGLDEGILSMKAGGKRRLYIP 182
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.138 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,816,604
Number of extensions: 154555
Number of successful extensions: 353
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 345
Number of HSP's successfully gapped: 11
Length of query: 211
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 117
Effective length of database: 8,529,465
Effective search space: 997947405
Effective search space used: 997947405
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 109 (46.6 bits)