BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0198800 Os02g0198800|AK105560
(328 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G04220.1 | chr2:1445401-1446324 FORWARD LENGTH=308 249 2e-66
AT4G12690.1 | chr4:7480896-7481753 FORWARD LENGTH=286 242 2e-64
AT5G48270.1 | chr5:19564744-19565712 REVERSE LENGTH=323 226 9e-60
AT3G13229.1 | chr3:4268566-4269435 REVERSE LENGTH=290 194 8e-50
AT5G28150.1 | chr5:10135826-10136695 FORWARD LENGTH=290 183 1e-46
AT3G04860.1 | chr3:1339349-1340218 REVERSE LENGTH=290 182 2e-46
AT2G27770.1 | chr2:11833089-11834051 REVERSE LENGTH=321 118 4e-27
AT5G11000.1 | chr5:3479166-3480335 REVERSE LENGTH=390 115 4e-26
AT2G25200.1 | chr2:10736580-10737644 REVERSE LENGTH=355 99 2e-21
AT2G36470.1 | chr2:15299385-15300368 REVERSE LENGTH=328 67 1e-11
>AT2G04220.1 | chr2:1445401-1446324 FORWARD LENGTH=308
Length = 307
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 113/229 (49%), Positives = 164/229 (71%), Gaps = 8/229 (3%)
Query: 63 YRAKINGAPRHVTAVWHRTLINQSFTISIXXXXXXXXXXXXXXXLSHKVELKPWPFWSKR 122
Y+A I+G R+VT +W + L+N S + + KV+LKPW FW+K+
Sbjct: 35 YQAHISGFWRNVTVLWSKNLMNHSLMVMVTNVEGDMN-------YCCKVDLKPWHFWNKK 87
Query: 123 GAKTLDVDGDRLDIVWDLRSAKFPASSPEPAAGYYVALVSRDEVVLLLGDGKKDAFKRTR 182
G K+ DV+G+ +++ WD RSAKF SSPEP++ +YVALVS +EVVLL+GD KK AFKRT+
Sbjct: 88 GYKSFDVEGNPVEVYWDFRSAKF-TSSPEPSSDFYVALVSEEEVVLLVGDYKKKAFKRTK 146
Query: 183 SRPSLDDAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSAIAGPREPEMRITVDGVV 242
SRP+L +A L ++E+V G++ F RA +K+HEI+V+S+ +GP+EPEM I++DG+V
Sbjct: 147 SRPALVEAALFYKKENVFGKKCFTTRAKFYDRKKEHEIIVESSTSGPKEPEMWISIDGIV 206
Query: 243 LVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAGGPAAQAVFVFKP 291
L+ V++LQWKFRGN+TV+VD+ PVQV WDV+DW+F+ +F+FKP
Sbjct: 207 LIQVKNLQWKFRGNQTVLVDKQPVQVFWDVYDWLFSMPGTGHGLFIFKP 255
>AT4G12690.1 | chr4:7480896-7481753 FORWARD LENGTH=286
Length = 285
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/266 (45%), Positives = 167/266 (62%), Gaps = 11/266 (4%)
Query: 63 YRAKINGAPRHVTAVWHRTLINQSFTISIXXXXXXXXXXXXXXXLSHKVELKPWPFWSKR 122
Y+A + G R+V +W + L+N S T+ + KV+LKPW FW K+
Sbjct: 31 YQAHMVGFWRNVRVLWSKNLMNHSLTVMVTSVQGDMN-------YCCKVDLKPWHFWYKK 83
Query: 123 GAKTLDVDGDRLDIVWDLRSAKFPASSPEPAAGYYVALVSRDEVVLLLGDGKKDAFKRTR 182
G K+ +V+G+++D+ WD RSAKF PEP++ +YVALVS +EVVLLLGD KK AFKRT+
Sbjct: 84 GYKSFEVEGNQVDVYWDFRSAKFNGG-PEPSSDFYVALVSEEEVVLLLGDHKKKAFKRTK 142
Query: 183 SRPSLDDAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSAIAGPREPEMRITVDGVV 242
SRPSL DA L ++E+V G++ F+ RA +++HEIVV+S+ G +EPEM I+VDG+V
Sbjct: 143 SRPSLVDAALFYKKENVFGKKIFSTRAKFHDRKREHEIVVESS-TGAKEPEMWISVDGIV 201
Query: 243 LVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAGGPAAQAVFVFKPXXXXXXXXXXX 302
LV VR+LQWKFRGN+TV+VD+ PVQV WDV+DW+F+ +F+FKP
Sbjct: 202 LVQVRNLQWKFRGNQTVLVDKEPVQVFWDVYDWLFSTPGTGHGLFIFKP--ESGESETSN 259
Query: 303 XXXXXXXXXXXXXXXYSFFLQAWKTE 328
+ FL AWK E
Sbjct: 260 ETKNCSASSSSSSSEFCLFLYAWKLE 285
>AT5G48270.1 | chr5:19564744-19565712 REVERSE LENGTH=323
Length = 322
Score = 226 bits (577), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 164/233 (70%), Gaps = 12/233 (5%)
Query: 63 YRAKINGAPRHVTAVWHRTLINQSFTISIXXXXXXXXXXXXXXXLSHKVEL-KPWPFWSK 121
Y+A + G R+VT +W + L+N S T+ + K++L KPW FWSK
Sbjct: 46 YQAHVAGFFRNVTVLWSKNLMNHSLTVMVSSLDNDMN-------YCCKIDLVKPWQFWSK 98
Query: 122 RGAKTLDVDGDRLDIVWDLRSAKFPAS-SPEPAAGYYVALVSRDEVVLLLGDGKKDAFKR 180
RG+K+ DV+G+ +++ WDLRSAK + SPEP + YYVA+VS +EVVLLLGD K+ A+KR
Sbjct: 99 RGSKSFDVEGNFVEVFWDLRSAKLAGNGSPEPVSDYYVAVVSDEEVVLLLGDLKQKAYKR 158
Query: 181 TRSRPSLDDAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSAIAGPREPEMRITVDG 240
T+SRP+L + + ++ES+ G++TF+ RA RK+HE+VV+S+ G EPEM I+VDG
Sbjct: 159 TKSRPALVEGFIYFKKESIFGKKTFSTRARFDEQRKEHEVVVESS-NGAAEPEMWISVDG 217
Query: 241 VVLVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAGG--PAAQAVFVFKP 291
+V+V+V++LQWKFRGN+ V+VD++PV V +DVHDW+FA A+ +F+FKP
Sbjct: 218 IVVVNVKNLQWKFRGNQMVMVDRTPVMVYYDVHDWLFASSETAASSGLFLFKP 270
>AT3G13229.1 | chr3:4268566-4269435 REVERSE LENGTH=290
Length = 289
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 145/232 (62%), Gaps = 8/232 (3%)
Query: 63 YRAKINGAPRHVTAVWHRTLINQSFTISIXXXXXXXXXXXXXXXLSHKVELKPWPFWSKR 122
Y +I P++V W +T + S TI I K++L FW+K+
Sbjct: 12 YVVEIAKTPQNVDVTWSKTTSSHSLTIKIENVKDEQQNHHQPV----KIDLSGSSFWAKK 67
Query: 123 GAKTLDVDGDRLDIVWDLRSAKFPASSPEPAAGYYVALVSRDEVVLLLGDGKKDAFKRTR 182
G K+L+ +G R+D+ WD R AKF ++ PEP++G+YV+LVS++ VL +GD + +A KRT+
Sbjct: 68 GLKSLEANGTRVDVYWDFRQAKF-SNFPEPSSGFYVSLVSQNATVLTIGDLRNEALKRTK 126
Query: 183 SRPSLDDAVLVSRRESVSGRRTFAARAPLAAG--RKDHEIVVDSAIAGPREPEMRITVDG 240
PS +A LVS++E V G+R F R G R+++E+V++++++GP +PEM ITVDG
Sbjct: 127 KNPSATEAALVSKQEHVHGKRVFYTRTAFGGGESRRENEVVIETSLSGPSDPEMWITVDG 186
Query: 241 VVLVHVRSLQWKFRGNETVIV-DQSPVQVLWDVHDWIFAGGPAAQAVFVFKP 291
V + + +L W+FRGNE V V D +++ WDVHDW+F ++ +FVFKP
Sbjct: 187 VPAIRIMNLNWRFRGNEVVTVSDGVSLEIFWDVHDWLFEPSGSSSGLFVFKP 238
>AT5G28150.1 | chr5:10135826-10136695 FORWARD LENGTH=290
Length = 289
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 145/266 (54%), Gaps = 12/266 (4%)
Query: 63 YRAKINGAPRHVTAVWHRTLINQSFTISIXXXXXXXXXXXXXXXLSHKVELKPWPFWSKR 122
Y+ +I G +T W + L+ QS T+ + KVE+KPW F ++
Sbjct: 36 YQCRIRGRNCLITVTWTKNLMGQSVTVGVDDSCNQSLC---------KVEIKPWLFTKRK 86
Query: 123 GAKTLDVDGDRLDIVWDLRSAKFPASSPEPAAGYYVALVSRDEVVLLLGDGKKDAFKRTR 182
G+K+L+ +D+ WDL SAKF S PE G+YV +V E+VLLLGD KK+AFK+T
Sbjct: 87 GSKSLEAYSCNIDVFWDLSSAKF-GSGPEALGGFYVGVVVDKEMVLLLGDMKKEAFKKTN 145
Query: 183 SRPSLDDAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSAIAGPREPEMRITVDGVV 242
+ PS AV ++++E V G+R FA +A L A K H+++++ +P + + VDG
Sbjct: 146 ASPSSLGAVFIAKKEHVFGKRVFATKAQLFADGKFHDLLIECD-TNVTDPCLVVRVDGKT 204
Query: 243 LVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAGGPAAQAVFVFKPXXXXXXXXXXX 302
L+ V+ L+WKFRGN+T++V++ V+VLWDVH W+F AVF+F+
Sbjct: 205 LLQVKRLKWKFRGNDTIVVNKMTVEVLWDVHSWLFGLPTTGNAVFMFRT-CQSTEKSLSF 263
Query: 303 XXXXXXXXXXXXXXXYSFFLQAWKTE 328
+S L AWK+E
Sbjct: 264 SQDVTTTNSKSHSFGFSLILYAWKSE 289
>AT3G04860.1 | chr3:1339349-1340218 REVERSE LENGTH=290
Length = 289
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 142/231 (61%), Gaps = 15/231 (6%)
Query: 63 YRAKINGAPRHVTAVWHRTLINQSFTISIXXXXXXXXXXXXXXXLSHKVELKPWPFWSKR 122
YR +I G +T W + L+ Q T+ + KVE+KPW F ++
Sbjct: 36 YRCRIRGRTCLITVTWTKNLMGQCVTVGVDDSCNRSLC---------KVEIKPWLFTKRK 86
Query: 123 GAKTLDVDGDRLDIVWDLRSAKFPASSPEPAAGYYVALVSRDEVVLLLGDGKKDAFKRTR 182
G+KTL+ +D+ WDL SAKF SSPEP G+YV +V E+VLLLGD KK+AFK+T
Sbjct: 87 GSKTLEAYACNIDVFWDLSSAKF-GSSPEPLGGFYVGVVVDKEMVLLLGDMKKEAFKKTN 145
Query: 183 SRPSLD-DAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSAIAGPREPEMRITVDGV 241
+ PS AV ++++E V G+RTFA +A + K H++V++ + +P + + VDG
Sbjct: 146 AAPSSSLGAVFIAKKEHVFGKRTFATKAQFSGDGKTHDLVIECDTS-LSDPCLIVRVDGK 204
Query: 242 VLVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAGGPAA--QAVFVFK 290
+L+ V+ L WKFRGN+T+IV++ V+VLWDVH W F G P++ AVF+F+
Sbjct: 205 ILMQVQRLHWKFRGNDTIIVNRISVEVLWDVHSWFF-GLPSSPGNAVFMFR 254
>AT2G27770.1 | chr2:11833089-11834051 REVERSE LENGTH=321
Length = 320
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 105/184 (57%), Gaps = 11/184 (5%)
Query: 118 FWSKRGAKTLDVDGDRLDIVWDLRSAKFPAS--SPEPAAGYYVALVSRDEVVLLLGDGKK 175
F K+G K++D D ++++ WDL SAK+ ++ PEP G+YV ++ ++ LLLGD +
Sbjct: 101 FRKKKGNKSVDSDLGKIEVFWDLSSAKYDSNLCGPEPINGFYVIVLVDGQMGLLLGDSSE 160
Query: 176 DAFKRTRSRPSLD-DAVLVSRRESVSGRRTF-AARAPLAAGRKDHEIVV--DSAIAGPRE 231
+ ++ + D LVSR+E +G TF + + HEIV+ + G ++
Sbjct: 161 ETLRKKGFSGDIGFDFSLVSRQEHFTGNNTFYSTKVRFVETGDSHEIVIRCNKETEGLKQ 220
Query: 232 ----PEMRITVDGVVLVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAG-GPAAQAV 286
P + + +D ++ V+ LQW FRGN+T+ +D V ++WDVHDW F+ G +AV
Sbjct: 221 SNHYPVLSVCIDKKTVIKVKRLQWNFRGNQTIFLDGLLVDLMWDVHDWFFSNQGACGRAV 280
Query: 287 FVFK 290
F+F+
Sbjct: 281 FMFR 284
>AT5G11000.1 | chr5:3479166-3480335 REVERSE LENGTH=390
Length = 389
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 109/192 (56%), Gaps = 16/192 (8%)
Query: 107 LSHKVELKPWPFWSKRGAKTLDVDGDRLDIVWDLRSAKFPASSPEPAAGYYVALVSRDEV 166
+S + L FW KRG++ + ++ + WDL AKF + S EP +G+Y+A+V E+
Sbjct: 89 VSFHLNLNTLAFWKKRGSRFV---SPKIQVFWDLSKAKFDSGS-EPRSGFYIAVVVDGEM 144
Query: 167 VLLLGDGKKDAFKRTRS-RPSLDDAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSA 225
LL+GD K+A+ R +S +P + L+ R+E V G R F +A G K+ EI +D
Sbjct: 145 GLLVGDSVKEAYARAKSAKPPTNPQALLLRKEHVFGARVFTTKARF--GGKNREISIDCR 202
Query: 226 IAGPREPEMRITVDGVVLVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAGGPA--- 282
+ + ++ +VD ++ ++ L+WKFRGNE V +D VQ+ WDV++W+F +
Sbjct: 203 V--DEDAKLCFSVDSKQVLQIKRLRWKFRGNEKVEIDGVHVQISWDVYNWLFQSKSSGDG 260
Query: 283 ----AQAVFVFK 290
AVF+F+
Sbjct: 261 GGGGGHAVFMFR 272
>AT2G25200.1 | chr2:10736580-10737644 REVERSE LENGTH=355
Length = 354
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 93/173 (53%), Gaps = 13/173 (7%)
Query: 107 LSHKVELKPWPFWSKRGAKTLDVDGDRLDIVWDLRSAKFPASSPEPAAGYYVALVSRDEV 166
+ ++E+KP FW K G+K L D + +VWDL AKF S P+P +G+YVA V
Sbjct: 100 FAFRLEIKPLTFWRKNGSKKLSRKPD-IRVVWDLTHAKF-GSGPDPESGFYVA------V 151
Query: 167 VLLLGDGKKDAFKRTRSRPSLDDAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSAI 226
+ G + RP +LVS++E++ G R ++ + + K EI +D +
Sbjct: 152 FVSGEVGLLVGGGNLKQRPR--RQILVSKKENLFGNRVYSTKIMIQG--KLREISIDVKV 207
Query: 227 AGPREPEMRITVDGVVLVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIFAG 279
+ +R +VD ++ + LQWKFRGN +++D +Q+ WDV +W+F G
Sbjct: 208 VND-DASLRFSVDDKSVLKISQLQWKFRGNTKIVIDGVTIQISWDVFNWLFGG 259
>AT2G36470.1 | chr2:15299385-15300368 REVERSE LENGTH=328
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 122 RGAKTLDVDGDRLD--IVWDLRSAKFPASSPEPAAGYYVALVSRDEVVLLLGD--GKKDA 177
+G++ L L+ I+WDL A++ + PEP ++V +V E+ L +GD ++D
Sbjct: 85 KGSRKLTSSSGSLNAEILWDLSEAEYENNGPEPIRRFFVVVVVNSEITLGVGDVDHERDT 144
Query: 178 FKRTRSRPSLDDAVLVSRRESVSGRRTFAARAPLAAGRKDHEIVVDSAIAGP-------- 229
+ R VS+ E SG +A + + HEI + G
Sbjct: 145 SSSSSWR--------VSKTERFSGTCWLTTKAQFSDVGRKHEIQIQCGGGGGGGGEEGYL 196
Query: 230 ---REPE-MRITVDGVVLVHVRSLQWKFRGNETVIVDQSPVQVLWDVHDWIF 277
+ PE M + VD + V+ L+W FRGN+T+ D + ++WD+HDW +
Sbjct: 197 WKVKSPETMSVYVDKRKVFSVKKLKWNFRGNQTMFFDGMLIDMMWDLHDWFY 248
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.134 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,362,417
Number of extensions: 183824
Number of successful extensions: 433
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 399
Number of HSP's successfully gapped: 10
Length of query: 328
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 229
Effective length of database: 8,392,385
Effective search space: 1921856165
Effective search space used: 1921856165
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)