BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0198400 Os02g0198400|Os02g0198400
(1002 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G48310.1 | chr5:19574961-19580362 REVERSE LENGTH=1157 778 0.0
AT4G24610.2 | chr4:12700837-12707899 REVERSE LENGTH=1156 661 0.0
AT5G65440.3 | chr5:26152015-26156896 FORWARD LENGTH=1126 542 e-154
>AT5G48310.1 | chr5:19574961-19580362 REVERSE LENGTH=1157
Length = 1156
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/729 (52%), Positives = 514/729 (70%), Gaps = 71/729 (9%)
Query: 341 EEMFTCTLELQSSCKDNQRDSISPQYLKPGTGESQLFYLESQGDSILVEVQDNNRVVIGR 400
EE F+C L+++S+ + Q + S L+ GTG +F+ ES+GD++++EVQD + V G+
Sbjct: 417 EEQFSCYLQMKSTAEGGQIEQGSSVCLQSGTGSYHVFFPESEGDALMIEVQDKKKSVQGK 476
Query: 401 AKIQVSSITDT---------------------HLCINFSVSSDNQGAAKMLQGGPAVDTI 439
A I ++S+T+ L I + +SD K P V+T+
Sbjct: 477 AMISITSLTENPNDNVRWWPIYHGEQECVGKIQLFIGSTTTSDEDCHIK---NAPVVETL 533
Query: 440 VYDMVLEAAMRAQNFNSKMLHVSGSWKWLLDEFSDYYGVSDAYRKLRYLSYILNVATPTK 499
YD++LEAA RAQ F+ + L + GSWKWLL EF+DYYGVSD+Y KLRYLS+++NVATPTK
Sbjct: 534 AYDLLLEAATRAQKFHPQNLRLDGSWKWLLSEFADYYGVSDSYTKLRYLSHVMNVATPTK 593
Query: 500 DCLELAYELLLPVMKARDDRTLTRQERSILLDCEDRIKSLLAVVFENYKSLDENSPTGLS 559
CL+L +ELL+P++ AR +++LTRQE+SIL+DCE I+ L+A VFENYKSLDEN P+GL+
Sbjct: 594 TCLQLVHELLVPILMARSEKSLTRQEKSILMDCEIEIEKLMATVFENYKSLDENFPSGLA 653
Query: 560 DLFGPISDCAAPALAPAVQIFSVLHDILSNEAQNILRNYLQTAAAKRCRRHMIETDEFMS 619
D+ P+ A AL+ AVQ+F++LHDILS EAQ L+NYLQTAA KRCR+HM++TDE++S
Sbjct: 654 DISCPVQVSATTALSSAVQVFTLLHDILSPEAQETLKNYLQTAAKKRCRKHMVDTDEYVS 713
Query: 620 SNNDSLLTDPMAISAAYLKMKTICINISREIQADIKIHNQNILPSSIDLPNIAASLYSTE 679
N++ L D + IS AYLKMK + + IS EI+ADIKI N+++LPSSIDL N+AA +YST+
Sbjct: 714 CNSEGFLLDSVTISTAYLKMKNLFLIISNEIEADIKITNEHVLPSSIDLANLAAVVYSTQ 773
Query: 680 LCKRLKGFLSASPPSRPLEHVAELLIATADFERDLDSWQVRPVHGGVVSRDLFHGYIMVW 739
LC RL+ FLSA PPS PL HV ELLIA +DFER+LDSW + PVHGGV SR LFH YIMVW
Sbjct: 774 LCHRLRAFLSAVPPSCPLPHVNELLIAVSDFERNLDSWGISPVHGGVDSRGLFHNYIMVW 833
Query: 740 IEDTRLQLLDNCRADKA---------------------IAD------------------- 759
I D L+LLD CRA+K I D
Sbjct: 834 IHDMELRLLDRCRAEKVPWSGVITNHSTSPFAEDIYERIKDSLIEYEVVISRWPQYTLIL 893
Query: 760 ------VEREIMKALEKQYMETLLPLRDGIPKILEKQVQRLTRRQSISPYVVPNQLGTFM 813
VER I+K+LEKQY + L+PL+D IPK L VQ+LTRRQS Y +P QLGTF+
Sbjct: 894 ENTASIVERAIVKSLEKQYNDILIPLKDSIPKRLNMHVQKLTRRQSSVLYSLPTQLGTFI 953
Query: 814 NTVKRMLDVLHCRVEDSLKSWAAYL-TITNGNAVFGEQMNSITVMLRKKYKKYLQAIVEK 872
NT+KR+LDVLH RVED L+ WA+ L + + +FGEQMN ITV+LR KY+ Y+QA V+K
Sbjct: 954 NTIKRVLDVLHPRVEDILRQWASCLPVVEDKKLIFGEQMNVITVLLRTKYRNYMQAAVDK 1013
Query: 873 LVSNAQANRTTRLKRILEETRESEGESDIRERMQALRVHLSDSIYNLHEVFSSRIFVAIC 932
LVSN Q+N+ TRLKRILEE +++E E ++RERM+ L + ++DS+ NLH+VF+S+IFVA C
Sbjct: 1014 LVSNTQSNKNTRLKRILEEIKDNEREVEVRERMKTLCLQITDSVSNLHDVFTSQIFVASC 1073
Query: 933 RGFWDRLGQIVLRFLESRKENRIWYRGSDYALGILDDVFASEMQKHLGNSLQDRDLDPPQ 992
R FWDR+ Q+VL+FLE RKEN + Y+GS YALGI++D FASEMQ+ GNSLQ++D++ P+
Sbjct: 1074 RLFWDRMAQVVLKFLEGRKENEVGYKGSYYALGIIEDTFASEMQRLQGNSLQEKDMEAPR 1133
Query: 993 SVVDARSIL 1001
SV++ARSIL
Sbjct: 1134 SVIEARSIL 1142
>AT4G24610.2 | chr4:12700837-12707899 REVERSE LENGTH=1156
Length = 1155
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/735 (45%), Positives = 484/735 (65%), Gaps = 83/735 (11%)
Query: 340 IEEMFTCTLELQSSCKDNQRDSISPQYLKPGTGESQLFYLESQGDSILVEVQDNNRVVIG 399
++E ++C L L+S +DN ++PG+GES +F+ +S GD ++VE+ D G
Sbjct: 419 VQETYSCKLRLKSLAEDNA------IMMQPGSGESHVFFPDSHGDDLIVEILDPMGKDFG 472
Query: 400 RAKIQVSSITD----------------------THLCINFSVSSDNQGAAKMLQGGPAVD 437
R +Q+++I++ L I++S S D+ L+ +
Sbjct: 473 RVLVQLANISEDSAEKLRWWSVFREPEHQHVGKLQLYIDYSASFDDNS---HLKCASVAE 529
Query: 438 TIVYDMVLEAAMRAQNFNSKMLHVSGSWKWLLDEFSDYYGVSDAYRKLRYLSYILNVATP 497
T+ YD+VLE A++ Q F + L + GSWKWLL+EF+ YYG+SD Y KLRYLSY+++VATP
Sbjct: 530 TVAYDLVLEVALKMQRFQQRNLLLYGSWKWLLEEFATYYGISDVYTKLRYLSYVMDVATP 589
Query: 498 TKDCLELAYELLLPV-MKARDDRTLTRQERSILLDCEDRIKSLLAVVFENYKSLDENSPT 556
T DCL L ++LL PV MK L+ QE IL + +D+I+ +L +VFENYKSLDE+S +
Sbjct: 590 TSDCLHLVHDLLTPVIMKGNGKSALSHQENRILNEIKDQIEQILKLVFENYKSLDESSFS 649
Query: 557 GLSDLFGPISDCAAPALAPAVQIFSVLHDILSNEAQNILRNYLQTAAAKRCRRHMIETDE 616
G+ D+ S APAL PAV+++++LHD+LS E Q L +Y Q AA KR RRHM ETDE
Sbjct: 650 GMIDVVNSASGVPAPALIPAVKLYTLLHDVLSPEDQTHLCHYFQAAAKKRSRRHMGETDE 709
Query: 617 FMSSNNDSLLTDPMAISAAYLKMKTICINISREIQADIKIHNQNILPSSIDLPNIAASLY 676
F+++N++ D A+SAAY KM C N+ EI DI+I N++ILPS +DLPN++AS+Y
Sbjct: 710 FVANNSEPNFWDMSAMSAAYQKMTMACKNVKNEIYTDIEIQNEDILPSFLDLPNLSASIY 769
Query: 677 STELCKRLKGFLSASPPSRPLEHVAELLIATADFERDLDSWQVRPVHGGVVSRDLFHGYI 736
ST+LC RL+ FL A PPS P VAEL+IATADF+RDL SW + P+ GGV +++LFH YI
Sbjct: 770 STDLCNRLRAFLVACPPSGPSPTVAELVIATADFQRDLSSWNISPIQGGVDAKELFHLYI 829
Query: 737 MVWIEDTRLQLLDNCRADK----------------------------------------- 755
M+WI+D RL LL++C+ DK
Sbjct: 830 MIWIQDKRLSLLESCKLDKQVKWSGVRTQHSTTPFVDEMYKRLNETIQDYQVIISRWPEY 889
Query: 756 ------AIADVEREIMKALEKQYMETLLPLRDGI-PKILE-KQVQRLTRRQSISPYVVPN 807
AIADVE+ ++ALEKQY + L PL++ + PK L K VQ+LT+R S+ PYVVP+
Sbjct: 890 IFVLESAIADVEKATVEALEKQYADVLSPLKENLAPKKLSFKYVQKLTKR-SVIPYVVPD 948
Query: 808 QLGTFMNTVKRMLDVLHCRVEDSLKSWAAYLTITNGNAVFGEQMNSITVMLRKKYKKYLQ 867
+LG +N++KRMLDVL +E K+W++ + GNA G++++ +TVMLR K++ YLQ
Sbjct: 949 ELGILLNSMKRMLDVLRPNIEAKFKAWSSCIP-DGGNAAPGDRLSEVTVMLRAKFRSYLQ 1007
Query: 868 AIVEKLVSNAQANRTTRLKRILEETRESEGESDIRERMQALRVHLSDSIYNLHEVFSSRI 927
A+VEKLV N++ +TT LK+IL++++ES GESDIR +M L+ L++++ +LH V + +
Sbjct: 1008 AVVEKLVENSKLQKTTMLKKILQDSKESVGESDIRSKMNNLKEQLTNTVNHLHSVCETHV 1067
Query: 928 FVAICRGFWDRLGQIVLRFLESRKENRIWYRGSDYALGILDDVFASEMQKHLGNSLQDRD 987
F+A+ RG+WDR+GQIVL FLE+RKENR WY+GS A+ ILDD FA++MQ+ LGNSL+++D
Sbjct: 1068 FIALSRGYWDRMGQIVLSFLENRKENRAWYKGSRVAVSILDDTFAAQMQQLLGNSLREQD 1127
Query: 988 LDPPQSVVDARSILC 1002
L+PP+S+++ RSILC
Sbjct: 1128 LEPPRSIMEVRSILC 1142
>AT5G65440.3 | chr5:26152015-26156896 FORWARD LENGTH=1126
Length = 1125
Score = 542 bits (1396), Expect = e-154, Method: Compositional matrix adjust.
Identities = 277/761 (36%), Positives = 447/761 (58%), Gaps = 108/761 (14%)
Query: 340 IEEMFTCTLELQSSCKDNQRDSISPQYLKPGTGESQLFYLESQGDSILVEVQDNNRVVIG 399
++E ++C+L L+SS +D+Q + +PG+GE+ +F +S GD +++EV+D+ ++G
Sbjct: 362 VQETYSCSLRLKSSPEDDQIKT------QPGSGETFIFLPDSLGDDLIIEVRDSKAQLLG 415
Query: 400 RAKIQVSSITD---------THLCINFSVSSDNQGAAKML-------------------- 430
R Q++++ D +H + D + M
Sbjct: 416 RVVAQLAAMADDPVRFSLSHSHYVFRLLIPLDAEAEDLMFFLFFLNQSEKLRWLPIYHEP 475
Query: 431 ----------------------QGGPAVDTIVYDMVLEAAMRAQNFNSKMLHVSGSWKWL 468
+ G +T YD+VLE AM+A+ F + L G W W+
Sbjct: 476 EHELIGRIQLTFSYSSSLDEKTKCGLVAETSAYDLVLEVAMKAERFQRRNLLFKGPWHWM 535
Query: 469 LDEFSDYYGVSDAYRKLRYLSYILNVATPTKDCLELAYELLLPVMKARDDR-TLTRQERS 527
+ F+ YYGVSDAY +LRYLSY+++VA+PTKDCL+L ++ L P++ + R L+ QE
Sbjct: 536 ITRFASYYGVSDAYTRLRYLSYVMDVASPTKDCLDLIHDFLFPIIMTSNHRAVLSHQENR 595
Query: 528 ILLDCEDRIKSLLAVVFENYKSLDENSPTGLSDLFGPISDCAAPALAPAVQIFSVLHDIL 587
+L + +++I+ +LA FENYKSL E S +G+ D+F + APA+ AV+++ +L+D+L
Sbjct: 596 LLGEIDEQIQQILASAFENYKSLAELSFSGMKDVFESATGTPAPAIESAVKLYGLLNDVL 655
Query: 588 SNEAQNILRNYLQTAAAKRCRRHMIETDEFMSSNNDSLLTDPMAISAAYLKMKTICINIS 647
+ EAQ L Y Q A+ KR RRH+++T++ +++ ++ + DPM ++A+Y KMK++ +++
Sbjct: 656 TPEAQLKLCRYFQAASKKRSRRHLLDTNDLLNNRSEGVPVDPMVLAASYQKMKSLILSLK 715
Query: 648 REIQADIKIHNQNILPSSIDLPNIAASLYSTELCKRLKGFLSASPPSRPLEHVAELLIAT 707
EI DI IH+ N+LPS IDLPN +A++YS ++C RL+ FL PP P V +L+I T
Sbjct: 716 NEISTDIAIHDCNVLPSFIDLPNHSAAIYSVDVCNRLREFLLVWPPPGPSPAVVDLVITT 775
Query: 708 ADFERDLDSWQVRPVHGGVVSRDLFHGYIMVWIEDTRLQLLDNCR--------------- 752
ADF+RDL SW + P+ GGV +++LF+ YI WIE+ R L + C+
Sbjct: 776 ADFQRDLSSWHINPIKGGVNAKELFYSYITTWIEEKRRVLYELCKLETSKACVEIPGLTS 835
Query: 753 ------------------------------ADKAIADVEREIMKALEKQYMETLLPLRDG 782
+K +AD E+ I++A+EKQ+ E L PL++
Sbjct: 836 PFVDEMYERLNGTLDEYDIIIRRWPEYAISLEKVVADSEKAIVEAMEKQFTEILSPLKES 895
Query: 783 IPKILEKQVQRLTRRQSISPYVVPNQLGTFMNTVKRMLDVLHCRVEDSLKSWAAYLTITN 842
KI ++ + + + +PY VP +LG +N++KR+LD+L +E+ KSW +Y I +
Sbjct: 896 --KIFGLKIVKKFTKGTPNPYSVPKELGVLLNSMKRVLDILRPSIENRFKSWNSY--IPD 951
Query: 843 G-NAVFGEQMNSITVMLRKKYKKYLQAIVEKLVSNAQANRTTRLKRILEETRESEGESDI 901
G N V GE+++ +TV+LR K++ Y+QA+VEKL N + +LK I+ + RE+ E D+
Sbjct: 952 GENRVLGERLSEVTVLLRSKFRSYMQALVEKLAENTRIQSHMKLKTIIHDLRETTAEPDV 1011
Query: 902 RERMQALRVHLSDSIYNLHEVFSSRIFVAICRGFWDRLGQIVLRFLESRKENRIWYRGSD 961
R RM +L+ L +I +LH VF +FVAICRG WDR+GQ VLR LE RK+N W++G
Sbjct: 1012 RNRMTSLKDLLDKTIDHLHGVFLPDVFVAICRGIWDRMGQDVLRLLEDRKDNVTWHKGPR 1071
Query: 962 YALGILDDVFASEMQKHLGNSLQDRDLDPPQSVVDARSILC 1002
A+ +LD++FA++MQ LGN L+ L+PP+S+++ RS+LC
Sbjct: 1072 IAVSVLDEIFATQMQSLLGNGLKPEHLEPPRSMMELRSMLC 1112
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 19,981,050
Number of extensions: 802010
Number of successful extensions: 2216
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 2205
Number of HSP's successfully gapped: 7
Length of query: 1002
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 894
Effective length of database: 8,145,641
Effective search space: 7282203054
Effective search space used: 7282203054
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 117 (49.7 bits)