BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0197600 Os02g0197600|AK068102
(180 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G61520.1 | chr1:22700152-22701149 FORWARD LENGTH=274 144 4e-35
AT1G76570.1 | chr1:28729132-28730754 FORWARD LENGTH=328 80 4e-16
AT1G45474.1 | chr1:17179353-17180439 FORWARD LENGTH=257 75 1e-14
AT1G29930.1 | chr1:10478071-10478874 FORWARD LENGTH=268 74 6e-14
AT1G29920.1 | chr1:10475089-10475892 REVERSE LENGTH=268 73 6e-14
AT1G29910.1 | chr1:10472443-10473246 REVERSE LENGTH=268 73 6e-14
AT2G05070.1 | chr2:1799436-1800329 REVERSE LENGTH=266 73 8e-14
AT2G05100.1 | chr2:1823449-1824331 REVERSE LENGTH=266 73 9e-14
AT3G54890.1 | chr3:20339706-20340922 REVERSE LENGTH=242 73 9e-14
AT2G34430.1 | chr2:14524818-14525618 FORWARD LENGTH=267 72 1e-13
AT2G34420.1 | chr2:14522716-14523513 REVERSE LENGTH=266 72 1e-13
AT3G27690.1 | chr3:10256002-10256921 FORWARD LENGTH=267 72 2e-13
AT1G19150.1 | chr1:6612806-6613799 FORWARD LENGTH=271 71 3e-13
AT5G54270.1 | chr5:22038424-22039383 FORWARD LENGTH=266 70 7e-13
AT4G10340.1 | chr4:6408200-6409496 FORWARD LENGTH=281 70 7e-13
AT3G61470.1 | chr3:22745736-22747032 FORWARD LENGTH=258 69 1e-12
AT3G47470.1 | chr3:17493622-17494773 REVERSE LENGTH=252 67 4e-12
AT5G28450.1 | chr5:10372978-10374190 REVERSE LENGTH=174 67 6e-12
AT5G01530.1 | chr5:209084-210243 FORWARD LENGTH=291 62 1e-10
AT3G08940.2 | chr3:2717717-2718665 FORWARD LENGTH=288 61 4e-10
>AT1G61520.1 | chr1:22700152-22701149 FORWARD LENGTH=274
Length = 273
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/104 (70%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 77 FQDWYTPGSMGKQYFLGLEKYLAGSGEPAYXXXXXXXXXXXXTKSEAEMKELKLKEIKNG 136
QDWY PGSMGKQYFLGLEK LAGSG PAY K E +KELKLKE+KNG
Sbjct: 171 LQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFG-KDEKSLKELKLKEVKNG 229
Query: 137 RLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNNILTSLKFH 180
RLAMLA LG+ +Q L TGVGP QNLLDHLADPV+NN+LTSLKFH
Sbjct: 230 RLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>AT1G76570.1 | chr1:28729132-28730754 FORWARD LENGTH=328
Length = 327
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 49/60 (81%)
Query: 119 TKSEAEMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNNILTSLK 178
++ ++LK+KEIKNGRLAM+A+LGF QA FTG GPVQNL+DH++DP+HNN++ L+
Sbjct: 267 SEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNNLIAMLQ 326
>AT1G45474.1 | chr1:17179353-17180439 FORWARD LENGTH=257
Length = 256
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Query: 77 FQDWYTPGSMGKQ--YFLGLEKYLAGSGEPAYXXXXXXXXXXXXTKSEAEMKELKLKEIK 134
+ D+ +PGS K+ +F GLE L G EP Y K + KLKEIK
Sbjct: 151 YMDFVSPGSQAKEGSFFFGLEAALEGL-EPGYPGGPLLNPLGL-AKDVQNAHDWKLKEIK 208
Query: 135 NGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNNILTSL 177
NGRLAM+A LGF VQA T GP+ NL++HL++P H I+ +L
Sbjct: 209 NGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQTL 251
>AT1G29930.1 | chr1:10478071-10478874 FORWARD LENGTH=268
Length = 267
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 119 TKSEAEMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNN 172
T EA ELK+KE+KNGRLAM + GF VQA+ TG GP++NL DHLADPV+NN
Sbjct: 203 TDPEA-FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>AT1G29920.1 | chr1:10475089-10475892 REVERSE LENGTH=268
Length = 267
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 119 TKSEAEMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNN 172
T EA ELK+KE+KNGRLAM + GF VQA+ TG GP++NL DHLADPV+NN
Sbjct: 203 TDPEA-FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>AT1G29910.1 | chr1:10472443-10473246 REVERSE LENGTH=268
Length = 267
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 119 TKSEAEMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNN 172
T EA ELK+KE+KNGRLAM + GF VQA+ TG GP++NL DHLADPV+NN
Sbjct: 203 TDPEA-FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>AT2G05070.1 | chr2:1799436-1800329 REVERSE LENGTH=266
Length = 265
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 125 MKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNN 172
ELK+KE+KNGRLAM + GF VQA+ TG GP++NL DHLADPV NN
Sbjct: 206 FSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>AT2G05100.1 | chr2:1823449-1824331 REVERSE LENGTH=266
Length = 265
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 125 MKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNN 172
ELK+KE+KNGRLAM + GF VQA+ TG GP++NL DHLADPV NN
Sbjct: 206 FSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>AT3G54890.1 | chr3:20339706-20340922 REVERSE LENGTH=242
Length = 241
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Query: 119 TKSEAEMKELKLKEIKNGRLAMLAFLGFSV-QALFTGVGPVQNLLDHLADPVHNNI 173
+K +++ELK+KEIKNGRLA+LAF+GF V Q+ + G GP++NL HLADP HNNI
Sbjct: 178 SKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 233
>AT2G34430.1 | chr2:14524818-14525618 FORWARD LENGTH=267
Length = 266
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 119 TKSEAEMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNN 172
T EA ELK+KE+KNGRLAM + GF VQA+ TG GP++NL DHLADPV+NN
Sbjct: 202 TDPEA-FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>AT2G34420.1 | chr2:14522716-14523513 REVERSE LENGTH=266
Length = 265
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 119 TKSEAEMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNN 172
T EA ELK+KE+KNGRLAM + GF VQA+ TG GP++NL DHLADPV+NN
Sbjct: 201 TDPEA-FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>AT3G27690.1 | chr3:10256002-10256921 FORWARD LENGTH=267
Length = 266
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 125 MKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNN 172
ELK+KE+KNGRLAM + GF VQA+ TG GP++NL DH+ADPV NN
Sbjct: 207 FSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHIADPVANN 254
>AT1G19150.1 | chr1:6612806-6613799 FORWARD LENGTH=271
Length = 270
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 39/53 (73%)
Query: 128 LKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNNILTSLKFH 180
L+ KEIKNGRLAMLAFLGF QA +T P++NL+ HLADP H N+ ++ H
Sbjct: 218 LRTKEIKNGRLAMLAFLGFCFQATYTSQDPIENLMAHLADPGHCNVFSAFTSH 270
>AT5G54270.1 | chr5:22038424-22039383 FORWARD LENGTH=266
Length = 265
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 38/46 (82%)
Query: 127 ELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNN 172
ELK+KEIKNGRLAM + GF VQA+ TG GP++NLLDHL +PV NN
Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
>AT4G10340.1 | chr4:6408200-6409496 FORWARD LENGTH=281
Length = 280
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 39/50 (78%)
Query: 128 LKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNNILTSL 177
LK+KEIKNGRLAM A LGF +QA TG GPV+NL HL+DP NN+LT +
Sbjct: 221 LKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVI 270
>AT3G61470.1 | chr3:22745736-22747032 FORWARD LENGTH=258
Length = 257
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%)
Query: 121 SEAEMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNNILTSL 177
S A++KEL+ KEIKNGRLAMLA +G Q ++TG GP+ NL HLADP H I +
Sbjct: 198 SPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAF 254
>AT3G47470.1 | chr3:17493622-17494773 REVERSE LENGTH=252
Length = 251
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 123 AEMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNNILTSLK 178
A +E K KE+ NGRLAMLAFLGF VQ TG GP +NLL HL+DP HN I+ +
Sbjct: 196 APTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTFN 251
>AT5G28450.1 | chr5:10372978-10374190 REVERSE LENGTH=174
Length = 173
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 39/57 (68%)
Query: 121 SEAEMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNNILTSL 177
S ++KEL+ KEIKNGRLAMLA +G Q ++TG GP+ NL HLADP H I +
Sbjct: 114 SPTKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAF 170
>AT5G01530.1 | chr5:209084-210243 FORWARD LENGTH=291
Length = 290
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 127 ELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNNILTSLK 178
+L+L EIK+ RLAM+AFLGF+VQA TG GP+ N HL+DP+H I+ +
Sbjct: 237 QLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFS 288
>AT3G08940.2 | chr3:2717717-2718665 FORWARD LENGTH=288
Length = 287
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 127 ELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNNILTSL 177
+L+L EIK+ RLAM+ FLGF+VQA TG GP+ N HL+DP+H I+ +
Sbjct: 234 QLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 284
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.138 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,902,562
Number of extensions: 78809
Number of successful extensions: 137
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 135
Number of HSP's successfully gapped: 20
Length of query: 180
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 88
Effective length of database: 8,584,297
Effective search space: 755418136
Effective search space used: 755418136
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 108 (46.2 bits)