BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0186400 Os02g0186400|AK067643
         (763 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32190.1  | chr4:15545052-15547689 FORWARD LENGTH=784          250   2e-66

>AT4G32190.1 | chr4:15545052-15547689 FORWARD LENGTH=784
          Length = 783

 Score =  250 bits (638), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 217/659 (32%), Positives = 368/659 (55%), Gaps = 26/659 (3%)

Query: 21  GSPS-CRPVTHELFRQKLSFMVSFQAQHMRCAPHL---IKSVVKGIRANITDGENGATEP 76
            SPS C      +   K   +V+F +   R   HL   ++SV+   R NI D  NG+ E 
Sbjct: 15  SSPSPCDYCLTRVVNHKQKSLVAFPSI-TRRKRHLLLSVQSVLHNTRPNIND--NGSAES 71

Query: 77  ARELLERLFAKTQRLDTSASQ------DSELSMS-IDVLKSEFEAALSTLRKKERDLRDA 129
           A  L ++LFA+T RL+   +Q      D +L  S + VL+S+ EAAL  L K+E DL DA
Sbjct: 72  ANVLFDKLFARTHRLERQTNQHSVYPDDDDLPYSNLGVLESDLEAALVALLKREEDLHDA 131

Query: 130 ENRVSVDQVRLNRAKKDLDQRERGINRAYARQQEMERSLGKASRDLVLQVRQIDNLKLLV 189
           E ++  D+ +LNRAK++L++RE+ I+ A  + + ++  L +A+ +L  Q R+I+ LK  +
Sbjct: 132 ERKLLSDKNKLNRAKEELEKREKTISEASLKHESLQEELKRANVELASQAREIEELKHKL 191

Query: 190 DEQDKKIASSQDLLSQKVTEVEKLKQDMLKKNEEVTLMRSEIKSKXXXXXXXXXXXXXXX 249
            E+D++ A+ Q  L+ K  E+EK++Q++  +++EV++  SE +SK               
Sbjct: 192 RERDEERAALQSSLTLKEEELEKMRQEIANRSKEVSMAISEFESKSQLLSKANEVVKRQE 251

Query: 250 XTIKELRSEIKRKEIDFSRSNELRKANEQKLKIAEQELERQNMGWLAAQKELKEVAQLAC 309
             I  L+  ++ KE +   S   +K  ++KL+  E  L++Q   WL AQ E+ ++ +   
Sbjct: 252 GEIYALQRALEEKEEELEISKATKKLEQEKLRETEANLKKQTEEWLIAQDEVNKLKEETV 311

Query: 310 KDMDGIKDTVSDFKRVRSLLDAVRSELIASKEAFSSSRKQIEDQAVQMQKQVQELSGQRL 369
           K +    +T+ DF +V+ LL  VR ELI+S+EA   SR+Q+E++ + ++KQ++EL  QR 
Sbjct: 312 KRLGEANETMEDFMKVKKLLTDVRFELISSREALVFSREQMEEKELLLEKQLEELEEQRK 371

Query: 370 LLSSFNQNLEAARLEIQGKAKELNAAQSRCHXXXXXXXXXXXXXXXXXAVLTKERESLEE 429
            + S+ Q+L  A  E++ +  +L   +++                     L KE+  LE 
Sbjct: 372 SVLSYMQSLRDAHTEVESERVKLRVVEAKNFALEREISVQKELLEDLREELQKEKPLLEL 431

Query: 430 KTKEVELLQKALVQKENEHSNSLKLVEIKESELLEARNEVQDMKSKVESIQIAVQEKDSE 489
              ++ ++Q  L +K N    S  L++ KES L+EA+ E+Q +KS+  S+++ +QEKD E
Sbjct: 432 AMHDISVIQDELYKKANAFQVSQNLLQEKESSLVEAKLEIQHLKSEQASLELLLQEKDEE 491

Query: 490 LSETQRRLAEVNSEVVELKQLLDSKEDQLVQVRTELQDKEQHIQTLQNKLDSMKFSCSQA 549
           L+E + +L EVN EV ELK L+ S+EDQL++    L++K+ H+  ++ +L S K   ++A
Sbjct: 492 LAEARNKLGEVNQEVTELKALMISREDQLMEATEMLKEKDVHLHRIEGELGSSKLKVTEA 551

Query: 550 ESVVQKIAELTGNLASSVEGEEMDIYALLDDEISSTGTALKSNLHK--------HNQLEA 601
           E VV++IAELT  L  S    +      +++EIS    +++  L K        + +L  
Sbjct: 552 EMVVERIAELTNRLLMSTTNGQNQNAMRINNEISI--DSMQQPLEKPHDDYGMENKRLVM 609

Query: 602 DIEMLKESLHQKDMDLRAAHEALDAKDQELKAVMRRWDVKE-EVDKL-EGFLKDPSDIK 658
           ++   +E+L  K+M++ A   AL  KD+E+  VM R + KE E+ KL E  + D  D+K
Sbjct: 610 ELSFTRENLRMKEMEVLAVQRALTFKDEEINVVMGRLEAKEQELKKLKEETINDSEDLK 668



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.311    0.126    0.322 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,300,412
Number of extensions: 459330
Number of successful extensions: 4312
Number of sequences better than 1.0e-05: 69
Number of HSP's gapped: 3870
Number of HSP's successfully gapped: 135
Length of query: 763
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 657
Effective length of database: 8,200,473
Effective search space: 5387710761
Effective search space used: 5387710761
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 116 (49.3 bits)