BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0184500 Os02g0184500|AK105238
         (212 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G32440.3  | chr5:12077014-12078396 FORWARD LENGTH=266          188   2e-48
AT1G80040.3  | chr1:30109447-30111051 REVERSE LENGTH=260          134   4e-32
AT5G02510.1  | chr5:560135-560860 FORWARD LENGTH=180               89   2e-18

>AT5G32440.3 | chr5:12077014-12078396 FORWARD LENGTH=266
          Length = 265

 Score =  188 bits (478), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/212 (49%), Positives = 141/212 (66%), Gaps = 5/212 (2%)

Query: 1   MDPQLLERALEASGDDIDSAIKSLNELCLESAAVGDSNSVLPAALKLSAEGVVNNGHLDV 60
           MD Q+LERA+E  GDD+DSAI+ LN+L LESA     ++   + + +    V        
Sbjct: 59  MDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVEPQQQGRS 118

Query: 61  LTENPHATENFQTNHHGSEWVELFVREMMXXXXXXXXXXXXXXXLEALEKSIMERAGTEA 120
             E P+       N  G+EWVELFVREMM               LEALEKSI  R GT+A
Sbjct: 119 AKEEPNVL-----NLDGTEWVELFVREMMNASDMKDAKARAARALEALEKSINARTGTDA 173

Query: 121 VHNLHKENVMLKEQLAIYLRENAVLKRAVAIQHERQKEFDERTQEVHSLKQLVLQYQEQI 180
           + NL +EN+MLK+QL   ++EN++LKRAV  Q +RQ+E ++++QE+  L+QLV QYQEQ+
Sbjct: 174 MQNLQQENMMLKQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQLVTQYQEQL 233

Query: 181 KTLEINNYALRVHLKQAQQNNSMPGRFPPDVF 212
           +TLE+NNYAL +HLKQAQQN+S+PGR+ PDVF
Sbjct: 234 RTLEVNNYALTLHLKQAQQNSSIPGRYHPDVF 265



>AT1G80040.3 | chr1:30109447-30111051 REVERSE LENGTH=260
          Length = 259

 Score =  134 bits (337), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 115/209 (55%), Gaps = 17/209 (8%)

Query: 4   QLLERALEASGDDIDSAIKSLNELCLESAAVGDSNSVLPAALKLSAEGVVNNGHLDVLTE 63
           Q+L +ALE +G D ++A+KSL      S+    +  +            V  G       
Sbjct: 68  QVLVKALEDNGSDFNAAMKSL--YSFASSEEKKAEELAAGGAATQETDAVCGG------- 118

Query: 64  NPHATENFQTNHHGSEWVELFVREMMXXXXXXXXXXXXXXXLEALEKSIMERAGTEAVHN 123
           NP  +        G +WVEL VRE++               LEALEK +  RA  EA + 
Sbjct: 119 NPPTS--------GDDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREEAGNK 170

Query: 124 LHKENVMLKEQLAIYLRENAVLKRAVAIQHERQKEFDERTQEVHSLKQLVLQYQEQIKTL 183
             +E V +++Q+   +++N VLKRAVAIQHERQK  ++   ++  LKQLV QYQE+++ L
Sbjct: 171 FQEEKVAVQQQVETLVKDNTVLKRAVAIQHERQKALEDANHQLGLLKQLVPQYQEKLRNL 230

Query: 184 EINNYALRVHLKQAQQNNSMPGRFPPDVF 212
           E+NNYALR+ L+Q +  NSMP RF PDVF
Sbjct: 231 EVNNYALRMQLQQVEHGNSMPARFNPDVF 259



>AT5G02510.1 | chr5:560135-560860 FORWARD LENGTH=180
          Length = 179

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 5/137 (3%)

Query: 77  GSEWVELFVREMMXXXXXXXXXXXXXXXLEALEKSIMERAGTEAVHNLHKENVMLKEQLA 136
           G++WV+  V EM                LEALE  I  +  T A   L  E   +KE L 
Sbjct: 47  GAKWVDRLVSEMTKAINIDDMRRRVAVILEALESII--KKNTNASKKL--EYASMKESLQ 102

Query: 137 IYLRENAVLKRAVAIQHERQKEFDERTQEVHSLKQLVLQYQEQIKTLEINNYALRVHLKQ 196
             + +N +LKR +A QH+R  E +E+ ++V  L+ +V QYQEQ+  LE++NYA+++HL++
Sbjct: 103 SLINDNQILKRVIANQHQRSSENEEKAKQVLHLRGVVGQYQEQVHKLELSNYAMKLHLQR 162

Query: 197 A-QQNNSMPGRFPPDVF 212
           + QQ  S  G  PPD++
Sbjct: 163 SQQQQTSFSGNLPPDIY 179



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.314    0.129    0.353 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,881,185
Number of extensions: 126775
Number of successful extensions: 446
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 443
Number of HSP's successfully gapped: 3
Length of query: 212
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 118
Effective length of database: 8,529,465
Effective search space: 1006476870
Effective search space used: 1006476870
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 109 (46.6 bits)