BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0179900 Os02g0179900|AK067511
(240 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G25060.1 | chr5:8634219-8639984 REVERSE LENGTH=947 235 2e-62
AT5G10800.1 | chr5:3412898-3418382 REVERSE LENGTH=948 202 1e-52
AT1G49600.1 | chr1:18357236-18360150 REVERSE LENGTH=446 60 1e-09
AT3G14100.1 | chr3:4673027-4675950 FORWARD LENGTH=428 58 5e-09
AT1G47500.1 | chr1:17432682-17434805 FORWARD LENGTH=435 56 1e-08
AT1G47490.1 | chr1:17424801-17427182 FORWARD LENGTH=433 56 2e-08
AT3G19130.1 | chr3:6611398-6613823 REVERSE LENGTH=436 56 2e-08
AT1G17370.1 | chr1:5951842-5954825 REVERSE LENGTH=420 55 4e-08
AT1G54080.2 | chr1:20183923-20186824 REVERSE LENGTH=431 55 4e-08
AT5G54900.1 | chr5:22295412-22298126 FORWARD LENGTH=388 53 1e-07
AT4G27000.1 | chr4:13554983-13557763 REVERSE LENGTH=416 53 1e-07
AT1G13690.1 | chr1:4693380-4694179 FORWARD LENGTH=178 51 5e-07
AT1G11650.2 | chr1:3914895-3917941 FORWARD LENGTH=406 49 2e-06
AT3G08000.1 | chr3:2555034-2555829 REVERSE LENGTH=144 47 7e-06
AT1G22760.1 | chr1:8055599-8058799 FORWARD LENGTH=661 47 7e-06
AT3G16380.1 | chr3:5558676-5560993 REVERSE LENGTH=538 47 8e-06
AT1G71770.1 | chr1:26990777-26993489 REVERSE LENGTH=683 47 9e-06
>AT5G25060.1 | chr5:8634219-8639984 REVERSE LENGTH=947
Length = 946
Score = 235 bits (599), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/154 (72%), Positives = 131/154 (85%), Gaps = 7/154 (4%)
Query: 87 RQKRNQEREQWREGRHTDTSASSSRFDELPDELDPIGKLPGSFDDGDPQTTNLYVGNLSP 146
R++RNQ+R+ R+G S+ SSRFDELPD+ DP G+ PGSFDDGDPQTTNLYVGNLSP
Sbjct: 136 RERRNQDRD--RQG----DSSPSSRFDELPDDFDPSGR-PGSFDDGDPQTTNLYVGNLSP 188
Query: 147 KVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMEGVVV 206
KVDENFL+RTFGRFGPIASVKIMWPRT+EE+RRQRNCGFV+FMNRADGQAAKDEM+G++V
Sbjct: 189 KVDENFLLRTFGRFGPIASVKIMWPRTDEEKRRQRNCGFVSFMNRADGQAAKDEMQGIIV 248
Query: 207 YDYELKLGWGKSVXXXXXXXXXXXXGHMAIRNKE 240
Y+YELK+GWGK+V GHMAIR+KE
Sbjct: 249 YEYELKIGWGKAVSLPSQALPAPPPGHMAIRSKE 282
>AT5G10800.1 | chr5:3412898-3418382 REVERSE LENGTH=948
Length = 947
Score = 202 bits (514), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/154 (69%), Positives = 126/154 (81%), Gaps = 3/154 (1%)
Query: 87 RQKRNQEREQWREGRHTDTSASSSRFDELPDELDPIGKLPGSFDDGDPQTTNLYVGNLSP 146
R++RNQ+RE R+ H + SSSRFDELPD DP G+L GS DDGDPQTTNLYV NLS
Sbjct: 140 RERRNQDRENSRD--HNSDNTSSSRFDELPDYFDPSGRL-GSLDDGDPQTTNLYVVNLSS 196
Query: 147 KVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMEGVVV 206
KVDENFL+RTFGRFGPIASVKIMWPRTEEE+RR+R+CGFVAFMNRADG+AAK++M+G++V
Sbjct: 197 KVDENFLLRTFGRFGPIASVKIMWPRTEEEKRRERHCGFVAFMNRADGEAAKEKMQGIIV 256
Query: 207 YDYELKLGWGKSVXXXXXXXXXXXXGHMAIRNKE 240
Y+YELK+GWGK V GHMAIR+KE
Sbjct: 257 YEYELKIGWGKVVFLPSQALPAPPPGHMAIRSKE 290
>AT1G49600.1 | chr1:18357236-18360150 REVERSE LENGTH=446
Length = 445
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 127 GSFDDGDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFV 186
GS DG+ + ++VG L V E LM+ F FG + SVKI + CGFV
Sbjct: 317 GSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKI---------PVGKGCGFV 367
Query: 187 AFMNRADGQAAKDEMEGVVVYDYELKLGWGKS 218
F NR + A + G V+ ++L WG+S
Sbjct: 368 QFANRQSAEEAIGNLNGTVIGKNTVRLSWGRS 399
>AT3G14100.1 | chr3:4673027-4675950 FORWARD LENGTH=428
Length = 427
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 138 NLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAA 197
N++VG+LSP+V + L ++F F + ++MW +++ R R GFV+F N+ D Q A
Sbjct: 145 NIFVGDLSPEVTDATLYQSFSVFSSCSDARVMW---DQKTGRSRGFGFVSFRNQQDAQTA 201
Query: 198 KDEMEGVVVYDYELKLGWG 216
+EM G + +++ W
Sbjct: 202 INEMNGKWLSSRQIRCNWA 220
>AT1G47500.1 | chr1:17432682-17434805 FORWARD LENGTH=435
Length = 434
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 123 GKLP-GSF--DDGDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRR 179
G +P G+F +GD T ++VG L V + L + F FG I SVKI
Sbjct: 289 GYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKI---------PV 339
Query: 180 QRNCGFVAFMNRADGQAAKDEMEGVVVYDYELKLGWGKS 218
+ CGFV F+NR + + A +++ G V+ ++L WG++
Sbjct: 340 GKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRN 378
>AT1G47490.1 | chr1:17424801-17427182 FORWARD LENGTH=433
Length = 432
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 131 DGDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMN 190
+GD T ++VG L V + L + F FG I SVKI + CGFV F+N
Sbjct: 298 EGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKI---------PVGKGCGFVQFVN 348
Query: 191 RADGQAAKDEMEGVVVYDYELKLGWGKS 218
R + + A +++ G V+ ++L WG++
Sbjct: 349 RPNAEEALEKLNGTVIGKQTVRLSWGRN 376
>AT3G19130.1 | chr3:6611398-6613823 REVERSE LENGTH=436
Length = 435
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 127 GSFDDGDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFV 186
GS DG+ ++VG + P V + L + F +FG + SVKI + CGFV
Sbjct: 311 GSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKI---------PVGKGCGFV 361
Query: 187 AFMNRADGQAAKDEMEGVVVYDYELKLGWGKS 218
F +R + A + + G V+ ++L WG+S
Sbjct: 362 QFADRKSAEDAIESLNGTVIGKNTVRLSWGRS 393
>AT1G17370.1 | chr1:5951842-5954825 REVERSE LENGTH=420
Length = 419
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 138 NLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAA 197
N++VG+LSP+V + L F + + ++MW +++ R R GFV+F N+ D Q A
Sbjct: 140 NIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMW---DQKTGRSRGFGFVSFRNQQDAQTA 196
Query: 198 KDEMEGVVVYDYELKLGW 215
DE+ G + +++ W
Sbjct: 197 IDEITGKWLGSRQIRCNW 214
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 116 PDELDPI--GKLPGSFDDGDPQTT-NLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPR 172
P +++PI G LP FD P T ++YVGN+ +V E L F GP+ S K++
Sbjct: 33 PPQIEPIPSGNLPPGFD---PSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLI--- 86
Query: 173 TEEERRRQRNCGFVAFMNRADGQAAKDEMEGVVVYDYELKLGW 215
R+ + + GFV + +R A + G ++ +K+ W
Sbjct: 87 ----RKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNW 125
>AT1G54080.2 | chr1:20183923-20186824 REVERSE LENGTH=431
Length = 430
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 138 NLYVGNLSPKVDENFLMRTFGRFGPIAS----VKIMWPRTEEERRRQRNCGFVAFMNRAD 193
N++VG+LSP+V + L +F F +S ++MW +++ R R GFV+F N+ D
Sbjct: 149 NIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMW---DQKTGRSRGFGFVSFRNQQD 205
Query: 194 GQAAKDEMEGVVVYDYELKLGWG 216
Q A +EM G V +++ W
Sbjct: 206 AQTAINEMNGKWVSSRQIRCNWA 228
>AT5G54900.1 | chr5:22295412-22298126 FORWARD LENGTH=388
Length = 387
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 131 DGDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMN 190
D DP T ++VG L V ++ L FG+FG + VKI + CGFV + N
Sbjct: 254 DNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKI---------PPGKRCGFVQYAN 304
Query: 191 RADGQAAKDEMEGVVVYDYELKLGWGKS 218
+A + A + G + ++L WG+S
Sbjct: 305 KASAEHALSVLNGTQLGGQSIRLSWGRS 332
>AT4G27000.1 | chr4:13554983-13557763 REVERSE LENGTH=416
Length = 415
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 127 GSFDDGDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFV 186
G+ + DP T ++VG + V E+ L FG+FG + VKI + CGFV
Sbjct: 268 GNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKI---------PAGKRCGFV 318
Query: 187 AFMNRADGQAAKDEMEGVVVYDYELKLGWGKS 218
+ NRA + A + G + ++L WG+S
Sbjct: 319 QYANRACAEQALSVLNGTQLGGQSIRLSWGRS 350
>AT1G13690.1 | chr1:4693380-4694179 FORWARD LENGTH=178
Length = 177
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 137 TNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQA 196
LYVG L+ +V+E+ L F FG I VK ++ ++ R+ GFV F+ R D A
Sbjct: 13 NTLYVGGLADEVNESILHAAFIPFGDIKDVKT---PLDQANQKHRSFGFVTFLEREDASA 69
Query: 197 AKDEMEGVVVY 207
A D M+G +Y
Sbjct: 70 AMDNMDGAELY 80
>AT1G11650.2 | chr1:3914895-3917941 FORWARD LENGTH=406
Length = 405
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 127 GSFDDGDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFV 186
G D DP T ++VG L V ++ L F ++G I VKI + CGFV
Sbjct: 251 GVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKI---------PAGKRCGFV 301
Query: 187 AFMNRADGQAAKDEMEGVVVYDYELKLGWGKS 218
F ++ + A + GV + ++L WG+S
Sbjct: 302 QFSEKSCAEEALRMLNGVQLGGTTVRLSWGRS 333
>AT3G08000.1 | chr3:2555034-2555829 REVERSE LENGTH=144
Length = 143
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 138 NLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAA 197
L++G LS VDE L F FG +A V+I + + R R GFV F D +A
Sbjct: 42 KLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSG---RSRGFGFVDFAEEGDALSA 98
Query: 198 KDEMEGVVVYDYELKLGW 215
KD M+G + L++ +
Sbjct: 99 KDAMDGKGLLGRPLRISF 116
>AT1G22760.1 | chr1:8055599-8058799 FORWARD LENGTH=661
Length = 660
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 134 PQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRAD 193
P+ TN+YV NL ++ E+ L +TFG+FG I+S +M ++ R GFV F
Sbjct: 226 PRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVM----RDQSGNSRCFGFVNFECTEA 281
Query: 194 GQAAKDEMEGVVVYDYELKLGWGK 217
+A ++M G+ + D L +G +
Sbjct: 282 AASAVEKMNGISLGDDVLYVGRAQ 305
>AT3G16380.1 | chr3:5558676-5560993 REVERSE LENGTH=538
Length = 537
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 137 TNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQA 196
+NLYV NLS ++E L FG +G I S K+M E R + GFV F N + +
Sbjct: 304 SNLYVKNLSESMNETRLREIFGCYGQIVSAKVMC----HENGRSKGFGFVCFSNCEESKQ 359
Query: 197 AKDEMEGVVV 206
AK + G +V
Sbjct: 360 AKRYLNGFLV 369
>AT1G71770.1 | chr1:26990777-26993489 REVERSE LENGTH=683
Length = 682
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 134 PQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRAD 193
P TN+YV NL ++ ++ L +TFG++G I+S +M +++ R+ GFV F++
Sbjct: 236 PSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVM----KDQSGNSRSFGFVNFVSPEA 291
Query: 194 GQAAKDEMEGVVVYDYELKLGWGK 217
A ++M G+ + + L +G +
Sbjct: 292 AAVAVEKMNGISLGEDVLYVGRAQ 315
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.139 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,644,027
Number of extensions: 180458
Number of successful extensions: 611
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 625
Number of HSP's successfully gapped: 19
Length of query: 240
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 144
Effective length of database: 8,474,633
Effective search space: 1220347152
Effective search space used: 1220347152
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)